RNA–Protein interactions for RNA: ENSMUST00000106039.8

Pkp3-202, Transcript of Plakophilin-3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pkp3, Length 2,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp3-202ENSMUST00000106039 Taf7Q9R1C0 341 aa16.27■□□□□ 0.2
Pkp3-202ENSMUST00000106039 Col4a1P02463 1669 aa16.27■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Chl1P70232 1209 aa16.26■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Prune1Q8BIW1 454 aa16.26■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Tmem119Q8R138 280 aa16.26■□□□□ 0.19
Pkp3-202ENSMUST00000106039 LlphQ9D945 130 aaKnown RBP16.26■□□□□ 0.19
Pkp3-202ENSMUST00000106039 TefQ9JLC6 301 aa16.26■□□□□ 0.19
Pkp3-202ENSMUST00000106039 CoblQ5NBX1 1337 aaKnown RBP16.26■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Casc1Q6TDU8 730 aa16.26■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Hmgb2P30681 210 aaKnown RBP16.25■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Ankrd13dQ6PD24 605 aa16.25■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Nol12Q8BG17 217 aa16.25■□□□□ 0.19
Pkp3-202ENSMUST00000106039 RestQ8VIG1 1082 aa16.25■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Anp32cQ64G17 123 aa16.25■□□□□ 0.19
Pkp3-202ENSMUST00000106039 EvcP57680 1005 aa16.24■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Pde4dQ01063 747 aa16.24■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Q3TQI7 289 aaKnown RBP16.24■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Tshz3Q8CGV9 1081 aa16.24■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Flad1Q8R123 492 aa16.24■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Irx6Q9ER75 438 aa16.24■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Ccdc173A0JLY1 547 aa16.24■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Bicdl1A0JNT9 577 aa16.24■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Cnnm1Q0GA42 951 aa16.24■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Ptpdc1Q6NZK8 747 aa16.24■□□□□ 0.19
Pkp3-202ENSMUST00000106039 E4f1Q8CCE9 783 aa16.24■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Lekr1B2RVN1 116 aa16.23■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Cers3Q1A3B0 383 aa16.23■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Nphp1Q9QY53 687 aa16.23■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Syde2E9PUP1 1314 aa16.23■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Smarce1O54941 411 aaKnown RBP16.23■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Tnnt1O88346 262 aa16.23■□□□□ 0.19
Pkp3-202ENSMUST00000106039 MsnP26041 577 aaKnown RBP16.23■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Prkab2Q6PAM0 271 aa16.23■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Sv2bQ8BG39 683 aa16.23■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Q8BT18 775 aa16.23■□□□□ 0.19
Pkp3-202ENSMUST00000106039 VirmaA2AIV2 1811 aaKnown RBP16.23■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Wdr78E9PYY5 807 aa16.22■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Mum1Q6DID5 682 aa16.22■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Srgap3Q812A2 1099 aa16.22■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Chrna2Q91X60 512 aa16.22■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Fkbp4P30416 458 aa16.22■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Pcmtd1P59913 357 aa16.22■□□□□ 0.19
Pkp3-202ENSMUST00000106039 KinQ8K339 391 aa16.22■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Gnai2P08752 355 aaKnown RBP16.21■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Gm12185Q5NCB2 835 aa16.21■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Zfp91Q62511 572 aa16.21■□□□□ 0.19
Pkp3-202ENSMUST00000106039 Tnnt2P50752 301 aa16.21■□□□□ 0.18
Pkp3-202ENSMUST00000106039 PsapQ61207 557 aaKnown RBP16.21■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Miga2Q8BK03 593 aa16.21■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Jakmip1Q8BVL9 626 aa16.21■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Gys2Q8VCB3 704 aa16.21■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Sipa1l3G3X9J0 1776 aa16.21■□□□□ 0.18
Pkp3-202ENSMUST00000106039 MetP16056 1379 aa16.2■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Gm13023A2A8N2 498 aa16.2■□□□□ 0.18
Pkp3-202ENSMUST00000106039 SympkQ80X82 1284 aa16.2■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Ubr3Q5U430 1889 aa16.2■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Cnksr1A2A9K7 700 aa16.2■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Morc2aQ69ZX6 1030 aa16.2■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Rps6ka5Q8C050 863 aa16.2■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Ppp1r42Q8R1Z4 357 aa16.2■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Ddx60E9PZQ1 1711 aa16.2■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Rnf123Q5XPI3 1314 aa16.19■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Bcl2l13P59017 434 aa16.19■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Bach2P97303 839 aa16.19■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Smarcc1P97496 1104 aa16.19■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Fbxo2Q80UW2 297 aa16.19■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Phf23Q8BSN5 401 aa16.19■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Anapc15P60007 132 aa16.18■□□□□ 0.18
Pkp3-202ENSMUST00000106039 OscarQ8VBT3 265 aa16.18■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Kif3aP28741 701 aa16.18■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Fam184aE9PW83 1143 aa16.17■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Hvcn1Q3U2S8 269 aa16.17■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Gigyf1Q99MR1 1044 aaKnown RBP16.17■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Adcy5P84309 1262 aa16.17■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Fam198bQ3UPI1 517 aa16.17■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Slc39a6Q8C145 765 aa16.16■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Sytl4Q9R0Q1 673 aa16.16■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Ythdc1E9Q5K9 736 aaKnown RBP16.16■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Nol8Q3UHX0 1147 aaKnown RBP16.16■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Pdzrn3Q69ZS0 1063 aa16.16■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Tbc1d31Q6NXY1 996 aa16.16■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Trim52Q8CDV4 233 aa16.16■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Igfbp6P47880 238 aa16.15■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Cwc27Q3TKY6 469 aa16.15■□□□□ 0.18
Pkp3-202ENSMUST00000106039 CoilQ5SU73 570 aa16.15■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Ddx19aQ61655 478 aaKnown RBP16.15■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Samm50Q8BGH2 469 aa16.15■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Zbtb1Q91VL9 713 aa16.15■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Akt1s1Q9D1F4 257 aa16.15■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Utp3Q9JI13 469 aaKnown RBP16.15■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Cavin1O54724 392 aa16.15■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Ints3Q7TPD0 1041 aaKnown RBP16.15■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Ccar2Q8VDP4 922 aaKnown RBP16.15■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Grpel1Q99LP6 217 aa16.15■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Slx4ipQ9D7Y9 413 aa16.15■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Lama4P97927 1816 aa16.15■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Strn4P58404 760 aa16.15■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Fam83gQ5SWY7 812 aa16.15■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Naa30Q8CES0 364 aa16.15■□□□□ 0.18
Pkp3-202ENSMUST00000106039 Fam13bQ8K2H3 851 aa16.15■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 72.7 ms