RNA–Protein interactions for RNA: ENSMUST00000047511.13

Shtn1-201, Transcript of Shootin-1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Shtn1, Length 4,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1-201ENSMUST00000047511 Card10P58660 1021 aa13.94□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Tubb6Q922F4 447 aa13.94□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Riok1Q922Q2 567 aa13.94□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Dctn1O08788 1281 aa13.93□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Ankrd13dQ6PD24 605 aa13.93□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Znf428Q8C1M2 176 aa13.93□□□□□ -0.18
Shtn1-201ENSMUST00000047511 CpvlQ9D3S9 478 aa13.93□□□□□ -0.18
Shtn1-201ENSMUST00000047511 ParvgQ9ERD8 331 aa13.93□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Plekho1Q9JIY0 408 aa13.93□□□□□ -0.18
Shtn1-201ENSMUST00000047511 IkQ9Z1M8 557 aaKnown RBP13.93□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Casp1P29452 402 aa13.93□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Adora1Q60612 326 aa13.93□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Zkscan16A2ALW2 728 aa13.93□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Tpm3P21107 285 aaKnown RBP13.93□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Rbm27Q5SFM8 1060 aaKnown RBP13.93□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Smc2Q8CG48 1191 aaKnown RBP13.93□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Ppp6r3Q922D4 844 aa13.93□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Sil1Q9EPK6 465 aa13.93□□□□□ -0.18
Shtn1-201ENSMUST00000047511 IncenpQ9WU62 880 aa13.93□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Zmym3Q9JLM4 1370 aa13.93□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Disp3A3KFU9 1347 aa13.92□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Calcoco2A2A6M5 331 aa13.92□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Ttll7A4Q9F0 912 aa13.92□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Zscan20B2KFW1 1030 aa13.92□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Rbm17Q8JZX4 405 aaKnown RBP13.92□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Bloc1s4Q8VED2 215 aa13.92□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Tmem132aQ922P8 1018 aa13.92□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Taf3Q5HZG4 932 aa13.92□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Rbm26Q6NZN0 1012 aaKnown RBP13.92□□□□□ -0.18
Shtn1-201ENSMUST00000047511 4930504O13RikQ8C5Z9 145 aa13.92□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Kif3aP28741 701 aa13.92□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Larp1Q6ZQ58 1072 aaKnown RBP13.92□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Ccdc39Q9D5Y1 937 aa13.92□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Dhx8A2A4P0 1244 aaKnown RBP13.91□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Cdc45Q9Z1X9 566 aa13.91□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Speer4dL7N216 212 aa13.91□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Frmd3Q8BHD4 595 aa13.91□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Cadps2Q8BYR5 1297 aa13.91□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Hmgn5Q9JL35 406 aa13.91□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Cnksr1A2A9K7 700 aa13.91□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Tm6sf1P58749 370 aa13.91□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Tgfb1i1Q62219 461 aa13.91□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Dmrtc1Q9D9R7 182 aa13.91□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Foxp4Q9DBY0 795 aaKnown RBP13.91□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Hoxa7P02830 229 aa13.9□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Bms1Q6PGF5 1284 aaKnown RBP13.9□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Tsr2Q8C8T8 191 aa13.9□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Cops6O88545 324 aa13.9□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Slc7a3P70423 618 aa13.9□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Ifit2Q64112 472 aa13.9□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Gimap8Q75N62 688 aa13.9□□□□□ -0.18
Shtn1-201ENSMUST00000047511 RarsQ9D0I9 660 aaKnown RBP13.9□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Bin1O08539 588 aaKnown RBP13.9□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Stx8O88983 236 aa13.9□□□□□ -0.18
Shtn1-201ENSMUST00000047511 IntuQ059U7 942 aa13.9□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Limch1Q3UH68 1057 aa13.9□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Pla2g4fQ50L41 855 aa13.9□□□□□ -0.18
Shtn1-201ENSMUST00000047511 DymQ8CHY3 669 aa13.9□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Ak2Q9WTP6 239 aa13.9□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Znf335A2A5K6 1337 aa13.9□□□□□ -0.18
Shtn1-201ENSMUST00000047511 Ccdc173A0JLY1 547 aa13.9□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Ddx19aQ61655 478 aaKnown RBP13.9□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Pdzrn3Q69ZS0 1063 aa13.9□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Pdcd11Q6NS46 1862 aaKnown RBP13.89□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Tpm1P58771 284 aa13.89□□□□□ -0.19
Shtn1-201ENSMUST00000047511 March6Q6ZQ89 909 aa13.89□□□□□ -0.19
Shtn1-201ENSMUST00000047511 RgmbQ7TQ33 436 aa13.89□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Cdca7Q9D0M2 382 aa13.89□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Arid4aF8VPQ2 1261 aaKnown RBP13.89□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Ccdc178Q8CDV0 866 aa13.89□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Dip2cE9PWR4 1557 aa13.89□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Stat1P42225 749 aa13.89□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Eif5P59325 429 aaKnown RBP13.89□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Lrrfip2Q91WK0 415 aa13.89□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Gm7347D3YYI9 267 aa13.88□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Speer4aF8VPX6 267 aa13.88□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Galntl5Q9D4M9 431 aa13.88□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Prl3d3A0A0M6L0J6 224 aa13.88□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Ncoa4Q5U4H9 625 aa13.88□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Znf653Q6YND2 615 aa13.88□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Tti2Q8BGV4 512 aa13.88□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Mrps27Q8BK72 415 aaKnown RBP13.88□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Tmem266Q8BZB3 538 aa13.88□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Med4Q9CQA5 270 aa13.88□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Mrps25Q9D125 171 aaKnown RBP13.88□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Cfap58B2RW38 873 aa13.87□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Zkscan8Q8BSL0 588 aa13.87□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Iqca1Q9CUL5 857 aa13.87□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Plch2A2AP18 1501 aa13.87□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Kif24Q6NWW5 1356 aa13.87□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Fam193aQ8CGI1 1231 aaKnown RBP13.87□□□□□ -0.19
Shtn1-201ENSMUST00000047511 4931400O07RikQ9D4M5 137 aa13.87□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Kifc2O08672 792 aa13.87□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Cdkl5Q3UTQ8 938 aa13.87□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Abtb2Q7TQI7 1024 aa13.87□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Cnot6lQ8VEG6 555 aa13.87□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Pmfbp1Q9WVQ0 1022 aa13.87□□□□□ -0.19
Shtn1-201ENSMUST00000047511 MycnP03966 462 aaKnown RBP13.86□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Bsdc1Q80Y55 427 aa13.86□□□□□ -0.19
Shtn1-201ENSMUST00000047511 Prex1Q69ZK0 1650 aa13.86□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 44.5 ms