RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 ALDH3A2P51648 485 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 PPP2R2BQ00005 443 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 SPIBQ01892 262 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 DAG1Q14118 895 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 NPTX1Q15818 432 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 WLSQ5T9L3 541 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 HLA-DQA1Q5Y7H0 255 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 DEF8Q6ZN54 512 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 TMPRSS12Q86WS5 348 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 AMER2Q8N7J2 671 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 CT55Q8WUE5 264 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 VMP1Q96GC9 406 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 B3GNT4Q9C0J1 378 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 NRSN2Q9GZP1 204 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 GABARAPL1Q9H0R8 117 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 IL33O95760 270 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 FOLR3P41439 243 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 ARHGDIAP52565 204 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 HMGA2P52926 109 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 CDH12P55289 794 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 SLC26A5P58743 744 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 RNF4P78317 190 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 ZNF141Q15928 474 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 MRPL2Q5T653 305 aaKnown RBP19.2■□□□□ 0.66
PNKP-203ENST00000593946 HSDL2Q6YN16 418 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 CYP4Z1Q86W10 505 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 OR4C15Q8NGM1 316 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 MAGEE2Q8TD90 523 aaPredicted RBP19.2■□□□□ 0.66
PNKP-203ENST00000593946 DHRS1Q96LJ7 313 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 BARD1Q99728 777 aaKnown RBP19.2■□□□□ 0.66
PNKP-203ENST00000593946 OSBPL10Q9BXB5 764 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 ACER3Q9NUN7 267 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 USE1Q9NZ43 259 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 CDHR4A6H8M9 788 aa19.19■□□□□ 0.66
PNKP-203ENST00000593946 TNFRSF11BO00300 401 aa19.19■□□□□ 0.66
PNKP-203ENST00000593946 TNFSF15O95150 251 aa19.19■□□□□ 0.66
PNKP-203ENST00000593946 HPRP00739 348 aa19.19■□□□□ 0.66
PNKP-203ENST00000593946 UQCRBP14927 111 aa19.19■□□□□ 0.66
PNKP-203ENST00000593946 TCN2P20062 427 aa19.19■□□□□ 0.66
PNKP-203ENST00000593946 LIMS1P48059 325 aa19.19■□□□□ 0.66
PNKP-203ENST00000593946 ATP12AP54707 1039 aa19.19■□□□□ 0.66
PNKP-203ENST00000593946 GK3PQ14409 553 aa19.19■□□□□ 0.66
PNKP-203ENST00000593946 GANABQ14697 944 aaKnown RBP19.19■□□□□ 0.66
PNKP-203ENST00000593946 PCOLCEQ15113 449 aa19.19■□□□□ 0.66
PNKP-203ENST00000593946 PDZK1Q5T2W1 519 aa19.19■□□□□ 0.66
PNKP-203ENST00000593946 PHF10Q8WUB8 498 aaKnown RBP19.19■□□□□ 0.66
PNKP-203ENST00000593946 HSPBAP1Q96EW2 488 aa19.19■□□□□ 0.66
PNKP-203ENST00000593946 RBM4BQ9BQ04 359 aaKnown RBP19.19■□□□□ 0.66
PNKP-203ENST00000593946 RBM4Q9BWF3 364 aaKnown RBP19.19■□□□□ 0.66
PNKP-203ENST00000593946 RAB26Q9ULW5 256 aa19.19■□□□□ 0.66
PNKP-203ENST00000593946 A4GNTQ9UNA3 340 aa19.19■□□□□ 0.66
PNKP-203ENST00000593946 HS3ST3B1Q9Y662 390 aa19.19■□□□□ 0.66
PNKP-203ENST00000593946 FRS3O43559 492 aa19.18■□□□□ 0.66
PNKP-203ENST00000593946 FUT4P22083 530 aa19.18■□□□□ 0.66
PNKP-203ENST00000593946 PRKACGP22612 351 aa19.18■□□□□ 0.66
PNKP-203ENST00000593946 NR0B1P51843 470 aaKnown RBP19.18■□□□□ 0.66
PNKP-203ENST00000593946 PSMD4P55036 377 aaKnown RBP19.18■□□□□ 0.66
PNKP-203ENST00000593946 LAPTM4AQ15012 233 aa19.18■□□□□ 0.66
PNKP-203ENST00000593946 TSPYL5Q86VY4 417 aaPredicted RBP19.18■□□□□ 0.66
PNKP-203ENST00000593946 ESX1Q8N693 406 aa19.18■□□□□ 0.66
PNKP-203ENST00000593946 OR8K3Q8NH51 312 aa19.18■□□□□ 0.66
PNKP-203ENST00000593946 NUBPLQ8TB37 319 aa19.18■□□□□ 0.66
PNKP-203ENST00000593946 DIO2Q92813 273 aa19.18■□□□□ 0.66
PNKP-203ENST00000593946 EFHD2Q96C19 240 aaPredicted RBP19.18■□□□□ 0.66
PNKP-203ENST00000593946 NAF1Q96HR8 494 aaKnown RBP19.18■□□□□ 0.66
PNKP-203ENST00000593946 ZNF700Q9H0M5 742 aa19.18■□□□□ 0.66
PNKP-203ENST00000593946 NMNAT1Q9HAN9 279 aaPredicted RBP19.18■□□□□ 0.66
PNKP-203ENST00000593946 SMURF2Q9HAU4 748 aa19.18■□□□□ 0.66
PNKP-203ENST00000593946 MRTO4Q9UKD2 239 aaKnown RBP19.18■□□□□ 0.66
PNKP-203ENST00000593946 TCFL5Q9UL49 500 aa19.18■□□□□ 0.66
PNKP-203ENST00000593946 PTPRZ1P23471 2315 aaPredicted RBP19.18■□□□□ 0.66
PNKP-203ENST00000593946 HEATR5AQ86XA9 2040 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 IGHV1-45A0A0A0MS14 117 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 A0A1W2PQ72 361 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 TPST2O60704 377 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 GADD45GO95257 159 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 IGHEP01854 428 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 MMP11P24347 488 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 RGS8P57771 180 aaPredicted RBP19.17■□□□□ 0.66
PNKP-203ENST00000593946 PSPHP78330 225 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 PLAURQ03405 335 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 NHSL2Q5HYW2 709 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 COLEC12Q5KU26 742 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 OR52J3Q8NH60 311 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 OIT3Q8WWZ8 545 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 TP53INP1Q96A56 240 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 PRRC1Q96M27 445 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 OSBPL11Q9BXB4 747 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 ARMC7Q9H6L4 198 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 SMPD3Q9NY59 655 aaPredicted RBP19.17■□□□□ 0.66
PNKP-203ENST00000593946 PDP1Q9P0J1 537 aaPredicted RBP19.17■□□□□ 0.66
PNKP-203ENST00000593946 RHCGQ9UBD6 479 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 LRCH1Q9Y2L9 728 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 AP4B1Q9Y6B7 739 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 CDC14CA4D256 554 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 COX6A1P12074 109 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 ZNF136P52737 540 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 NHLH1Q02575 133 aa19.17■□□□□ 0.66
PNKP-203ENST00000593946 PIN1Q13526 163 aaPredicted RBP19.17■□□□□ 0.66
PNKP-203ENST00000593946 GRAMD2AQ8IUY3 354 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms