RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 OR2B3O76000 313 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 MPC1LP0DKB6 136 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 CD8BP10966 210 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 TACR3P29371 465 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 KCNQ1P51787 676 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 GALNT1Q10472 559 aaPredicted RBP11.45□□□□□ -0.58
PCF11-201ENST00000298281 CATSPEREQ5SY80 951 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 CDCA2Q69YH5 1023 aaPredicted RBP11.45□□□□□ -0.58
PCF11-201ENST00000298281 NXPE4Q6UWF7 544 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 UGT2A3Q6UWM9 527 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 ZNF436Q9C0F3 470 aaPredicted RBP11.45□□□□□ -0.58
PCF11-201ENST00000298281 NSUN3Q9H649 340 aaKnown RBP11.45□□□□□ -0.58
PCF11-201ENST00000298281 RNH1P13489 461 aaKnown RBP11.45□□□□□ -0.58
PCF11-201ENST00000298281 MEOX1P50221 254 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 GTPBP8Q8N3Z3 284 aaPredicted RBP11.45□□□□□ -0.58
PCF11-201ENST00000298281 NPY6RQ99463 290 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 GPR174Q9BXC1 333 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 RBPJLQ9UBG7 517 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 PISDQ9UG56 409 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 JUNDP17535 347 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 FECHP22830 423 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 STT3AP46977 705 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 RAB11AP62491 216 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 HIST2H3PS2Q5TEC6 136 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 GSTO2Q9H4Y5 243 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 KLHL9Q9P2J3 617 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 MCTS1Q9ULC4 181 aaKnown RBP11.45□□□□□ -0.58
PCF11-201ENST00000298281 RHBDD3Q9Y3P4 386 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 LRP5LA4QPB2 252 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 AGPAT2O15120 278 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 GSRP00390 522 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 ASGR2P07307 311 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 RAB5CP51148 216 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 TGFBR3Q03167 851 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 CEACAM19Q7Z692 300 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 ASPGQ86U10 573 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 TSPAN33Q86UF1 283 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 WWTR1Q9GZV5 400 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 SLC6A17Q9H1V8 727 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 ARMC1Q9NVT9 282 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 TAS2R8Q9NYW2 309 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 WNT6Q9Y6F9 365 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 EMC8O43402 210 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 FGF18O76093 207 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 SLC25A11Q02978 314 aaKnown RBP11.45□□□□□ -0.58
PCF11-201ENST00000298281 TLE4Q04727 773 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 AKR1C1Q04828 323 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 MAL2Q969L2 176 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 SENP5Q96HI0 755 aaPredicted RBP11.45□□□□□ -0.58
PCF11-201ENST00000298281 MAELQ96JY0 434 aaKnown RBP11.45□□□□□ -0.58
PCF11-201ENST00000298281 RNF11Q9Y3C5 154 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 K7EQM0 130 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 EPHA5P54756 1037 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 ELP2Q6IA86 826 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 ZNF705AQ6ZN79 300 aaPredicted RBP11.45□□□□□ -0.58
PCF11-201ENST00000298281 PIM3Q86V86 326 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 CLDN19Q8N6F1 224 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 GIMAP1Q8WWP7 306 aa11.45□□□□□ -0.58
PCF11-201ENST00000298281 SLC22A31A6NKX4 558 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 HPRP00739 348 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 PGCP20142 388 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 RPS15AP62244 130 aaKnown RBP11.44□□□□□ -0.58
PCF11-201ENST00000298281 FLI1Q01543 452 aaPredicted RBP11.44□□□□□ -0.58
PCF11-201ENST00000298281 MANEAQ5SRI9 462 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 ZNF678Q5SXM1 525 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 NEIL3Q8TAT5 605 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 WDR92Q96MX6 357 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 MOB1AQ9H8S9 216 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 RHCGQ9UBD6 479 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 MEIS3P2A8K0S8 358 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 FOXO6A8MYZ6 492 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 SYT7O43581 403 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 C1GALT1C1LP0DN25 315 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 MC3RP41968 323 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 C19orf35Q6ZS72 473 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 PM20D2Q8IYS1 436 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 ZNF516Q92618 1163 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 SPIN2AQ99865 258 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 SPIN2BQ9BPZ2 258 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 OARD1Q9Y530 152 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 A0A1W2PPH5 198 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 C1orf226A1L170 272 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 DRD2P14416 443 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 GLB1P16278 677 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 RAD52P43351 418 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 PTTG1IPP53801 180 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 CRMP1Q14194 572 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 EIF4HQ15056 248 aaKnown RBP11.44□□□□□ -0.58
PCF11-201ENST00000298281 TEAD2Q15562 447 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 LY6G5CQ5SRR4 150 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 C3orf58Q8NDZ4 430 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 TBC1D20Q96BZ9 403 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 DOHHQ9BU89 302 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 EXTL2Q9UBQ6 330 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 SCN8AQ9UQD0 1980 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 LEFTY2O00292 366 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 MAN2B1O00754 1011 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 AQP7O14520 342 aa11.44□□□□□ -0.58
PCF11-201ENST00000298281 HNRNPA1P09651 372 aaKnown RBP eCLIP11.44□□□□□ -0.58
PCF11-201ENST00000298281 ZNF44P15621 663 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms