RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 ERVK-25P63136 954 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 NKX6-1P78426 367 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 PRICKLE2Q7Z3G6 844 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 ZNF679Q8IYX0 411 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 IGSF21Q96ID5 467 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 PPA2Q9H2U2 334 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 C19orf12Q9NSK7 152 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 LRIT1Q9P2V4 623 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 MYH2Q9UKX2 1941 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 PRAMEF11O60813 436 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 GRIN2CQ14957 1233 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 TMEFF1Q8IYR6 380 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 G6PC3Q9BUM1 346 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 DERL2Q9GZP9 239 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 GSTT2P0CG29 244 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 EDDM3BP56851 147 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 PITX1P78337 314 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 GBX1Q14549 363 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 NADK2Q4G0N4 442 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 SLC22A6Q4U2R8 563 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 BAIAP2L2Q6UXY1 529 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 CYB561A3Q8NBI2 242 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 DCLRE1CQ96SD1 692 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 URM1Q9BTM9 101 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 DPH7Q9BTV6 452 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 ULBP3Q9BZM4 244 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 RPF2Q9H7B2 306 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 BHLHE40O14503 412 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 PAHP00439 452 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 YES1P07947 543 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 GRM7Q14831 915 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 RAB11BQ15907 218 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 FAM122CQ6P4D5 195 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 GRPEL2Q8TAA5 225 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 HPSE2Q8WWQ2 592 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 FAM3CQ92520 227 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 BOCQ9BWV1 1114 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 PSAT1Q9Y617 370 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 KIAA0355O15063 1070 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 SNAPC5O75971 98 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 GYPBP06028 91 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 DCNP07585 359 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 CDKN2CP42773 168 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 RPS5P46782 204 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 HK3P52790 923 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 PCLAFQ15004 111 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 PLA1AQ53H76 456 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 SHEQ5VZ18 495 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 OR52P1PQ8NH57 321 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 ZNF461Q8TAF7 563 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 SLC30A2Q9BRI3 323 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 REEP4Q9H6H4 257 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 SPATA31D1Q6ZQQ2 1576 aa16.1■□□□□ 0.17
CACNA1A-253ENST00000637927 KCNC3Q14003 757 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 HERC3Q15034 1050 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 SLC36A3Q495N2 470 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 TMEM173Q86WV6 379 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 MTMR14Q8NCE2 650 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 MSI2Q96DH6 328 aaKnown RBP16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 SORBS1Q9BX66 1292 aaKnown RBP16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 CD300LBA8K4G0 201 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 GRPP07492 148 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 ZNF763Q0D2J5 394 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 DPY19L1Q2PZI1 675 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 ZBED5Q49AG3 693 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 CES4AQ5XG92 561 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 TSPAN33Q86UF1 283 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 NTAN1Q96AB6 310 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 TXNDC15Q96J42 360 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 MROH1Q8NDA8 1641 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 KDM4EB2RXH2 506 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 TXNL1O43396 289 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 IL4RP24394 825 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 BIDP55957 195 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 FTMTQ8N4E7 242 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 DENND1AQ8TEH3 1009 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 OSBPL7Q9BZF2 842 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 EMC3Q9P0I2 261 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 FAM159BA6NKW6 160 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 TOR1AO14656 332 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 POLR1CO15160 346 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 DNASE1P24855 282 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 MAPK3P27361 379 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 SHMT2P34897 504 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 RORAP35398 523 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 WDR4P57081 412 aaKnown RBP16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 TP53I3Q53FA7 332 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 SDR9C7Q8NEX9 313 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 PPIL3Q9H2H8 161 aaKnown RBP16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 TCHHQ07283 1943 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 MYH3P11055 1940 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 OIP5O43482 229 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 GSTM3P21266 225 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 UQCRC2P22695 453 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 CDKN2DP55273 166 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 LGALS4P56470 323 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 OR5AS1Q8N127 324 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 TRMT61AQ96FX7 289 aaKnown RBP16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 SFXN1Q9H9B4 322 aa16.09■□□□□ 0.17
CACNA1A-253ENST00000637927 A0A1W2PPV4 95 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms