RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 B3GNT7Q8NFL0 401 aa19.24■□□□□ 0.67
PNKP-203ENST00000593946 OR2Y1Q8NGV0 311 aa19.24■□□□□ 0.67
PNKP-203ENST00000593946 NXF5Q9H1B4 397 aaKnown RBP19.24■□□□□ 0.67
PNKP-203ENST00000593946 CACYBPQ9HB71 228 aaKnown RBP19.24■□□□□ 0.67
PNKP-203ENST00000593946 ZNF232Q9UNY5 417 aa19.24■□□□□ 0.67
PNKP-203ENST00000593946 MAGED1Q9Y5V3 778 aaPredicted RBP19.24■□□□□ 0.67
PNKP-203ENST00000593946 C2orf92A0A1B0GVN3 265 aa19.23■□□□□ 0.67
PNKP-203ENST00000593946 PEX12O00623 359 aa19.23■□□□□ 0.67
PNKP-203ENST00000593946 EI24O14681 340 aa19.23■□□□□ 0.67
PNKP-203ENST00000593946 TM4SF5O14894 197 aa19.23■□□□□ 0.67
PNKP-203ENST00000593946 DBIP07108 87 aaKnown RBP19.23■□□□□ 0.67
PNKP-203ENST00000593946 IL7RP16871 459 aa19.23■□□□□ 0.67
PNKP-203ENST00000593946 RRM2P31350 389 aa19.23■□□□□ 0.67
PNKP-203ENST00000593946 LARS2Q15031 903 aaKnown RBP19.23■□□□□ 0.67
PNKP-203ENST00000593946 FLYWCH1Q4VC44 716 aa19.23■□□□□ 0.67
PNKP-203ENST00000593946 TMEM164Q5U3C3 297 aa19.23■□□□□ 0.67
PNKP-203ENST00000593946 SHQ1Q6PI26 577 aaKnown RBP19.23■□□□□ 0.67
PNKP-203ENST00000593946 ZNF605Q86T29 641 aa19.23■□□□□ 0.67
PNKP-203ENST00000593946 APCDD1LQ8NCL9 501 aa19.23■□□□□ 0.67
PNKP-203ENST00000593946 VANGL1Q8TAA9 524 aaPredicted RBP19.23■□□□□ 0.67
PNKP-203ENST00000593946 LCORQ96JN0 433 aaPredicted RBP19.23■□□□□ 0.67
PNKP-203ENST00000593946 ZNF597Q96LX8 424 aa19.23■□□□□ 0.67
PNKP-203ENST00000593946 LPAR4Q99677 370 aa19.23■□□□□ 0.67
PNKP-203ENST00000593946 PIP5K1AQ99755 562 aa19.23■□□□□ 0.67
PNKP-203ENST00000593946 ARHGDIGQ99819 225 aa19.23■□□□□ 0.67
PNKP-203ENST00000593946 G6PC3Q9BUM1 346 aa19.23■□□□□ 0.67
PNKP-203ENST00000593946 WWTR1Q9GZV5 400 aa19.23■□□□□ 0.67
PNKP-203ENST00000593946 REEP1Q9H902 201 aa19.23■□□□□ 0.67
PNKP-203ENST00000593946 FOXJ2Q9P0K8 574 aa19.23■□□□□ 0.67
PNKP-203ENST00000593946 PTRH2Q9Y3E5 179 aaKnown RBP19.23■□□□□ 0.67
PNKP-203ENST00000593946 SAMHD1Q9Y3Z3 626 aaKnown RBP19.23■□□□□ 0.67
PNKP-203ENST00000593946 EXPH5Q8NEV8 1989 aa19.23■□□□□ 0.67
PNKP-203ENST00000593946 CEP250Q9BV73 2442 aa19.23■□□□□ 0.67
PNKP-203ENST00000593946 LOC102723996A0A087X1L8 192 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 NPIPA5A0A0B4J1W7 369 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 NPIPA7E9PJI5 369 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 J3KTA2 159 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 M0R3H8 397 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 SEMA7AO75326 666 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 UGT2B17O75795 530 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 CD63P08962 238 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 CCNYL3P0C7X3 344 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 NPIPA8P0DM63 369 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 NID1P14543 1247 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 ATP6V1C1P21283 382 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 FPR1P21462 350 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 DNAJA1P31689 397 aaKnown RBP19.22■□□□□ 0.67
PNKP-203ENST00000593946 YAP1P46937 504 aaKnown RBP19.22■□□□□ 0.67
PNKP-203ENST00000593946 RFX3P48380 749 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 EEF1A1P68104 462 aaKnown RBP19.22■□□□□ 0.67
PNKP-203ENST00000593946 TAF11Q15544 211 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.22■□□□□ 0.67
PNKP-203ENST00000593946 OTUD3Q5T2D3 398 aaPredicted RBP19.22■□□□□ 0.67
PNKP-203ENST00000593946 TCTN3Q6NUS6 607 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 ZNF836Q6ZNA1 936 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 SLC29A4Q7RTT9 530 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 STK32CQ86UX6 486 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 RBM45Q8IUH3 476 aaKnown RBP19.22■□□□□ 0.67
PNKP-203ENST00000593946 HS3ST5Q8IZT8 346 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 C8orf44Q96CB5 159 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 EPYCQ99645 322 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 ZNF223Q9UK11 482 aaPredicted RBP19.22■□□□□ 0.67
PNKP-203ENST00000593946 FAM32AQ9Y421 112 aaKnown RBP19.22■□□□□ 0.67
PNKP-203ENST00000593946 TESMINQ9Y4I5 508 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 PCDHGA10Q9Y5H3 936 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 C7orf72A4D263 438 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 NPIPB9F8W1W9 429 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 PRKNO60260 465 aaPredicted RBP19.22■□□□□ 0.67
PNKP-203ENST00000593946 ACADSP16219 412 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 TARDBPQ13148 414 aaKnown RBP eCLIP19.22■□□□□ 0.67
PNKP-203ENST00000593946 LIN52Q52LA3 116 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 HIPK1Q86Z02 1210 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 CLIP4Q8N3C7 705 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 ZNF441Q8N8Z8 693 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 C17orf47Q8NEP4 570 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 OR6T1Q8NGN1 323 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 SDCCAG3Q96C92 435 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 NRBF2Q96F24 287 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 GAL3ST4Q96RP7 486 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 LMF1Q96S06 567 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 KCND3Q9UK17 655 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 ACAD8Q9UKU7 415 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 LYVE1Q9Y5Y7 322 aa19.22■□□□□ 0.67
PNKP-203ENST00000593946 CLDN24A6NM45 220 aa19.21■□□□□ 0.67
PNKP-203ENST00000593946 FFAR1O14842 300 aa19.21■□□□□ 0.67
PNKP-203ENST00000593946 SEC24DO94855 1032 aaPredicted RBP19.21■□□□□ 0.67
PNKP-203ENST00000593946 HSPA13P48723 471 aa19.21■□□□□ 0.67
PNKP-203ENST00000593946 DECR1Q16698 335 aa19.21■□□□□ 0.67
PNKP-203ENST00000593946 EIPR1Q53HC9 387 aa19.21■□□□□ 0.67
PNKP-203ENST00000593946 CMPK2Q5EBM0 449 aa19.21■□□□□ 0.67
PNKP-203ENST00000593946 RNF220Q5VTB9 566 aa19.21■□□□□ 0.67
PNKP-203ENST00000593946 RLIMQ9NVW2 624 aa19.21■□□□□ 0.67
PNKP-203ENST00000593946 KLHL28Q9NXS3 571 aa19.21■□□□□ 0.67
PNKP-203ENST00000593946 SLC13A4Q9UKG4 626 aa19.21■□□□□ 0.67
PNKP-203ENST00000593946 DLGAP1O14490 977 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 PCDH17O14917 1159 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 TO15178 435 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 ALPLP05186 524 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 RAB40ALP0C0E4 278 aa19.2■□□□□ 0.66
PNKP-203ENST00000593946 CEACAM1P13688 526 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms