RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 BIKQ13323 160 aa20.46■□□□□ 0.87
VSX1-205ENST00000429762 COLEC12Q5KU26 742 aa20.46■□□□□ 0.87
VSX1-205ENST00000429762 FAM199XQ6PEV8 388 aaPredicted RBP20.46■□□□□ 0.87
VSX1-205ENST00000429762 RBM44Q6ZP01 1051 aaKnown RBP20.46■□□□□ 0.87
VSX1-205ENST00000429762 NIPSNAP1Q9BPW8 284 aa20.46■□□□□ 0.87
VSX1-205ENST00000429762 TRIM45Q9H8W5 580 aaPredicted RBP20.46■□□□□ 0.87
VSX1-205ENST00000429762 C3orf18Q9UK00 162 aa20.46■□□□□ 0.87
VSX1-205ENST00000429762 IFT52Q9Y366 437 aa20.46■□□□□ 0.87
VSX1-205ENST00000429762 C4orf47A7E2U8 309 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 CCNB2O95067 398 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 HEXBP07686 556 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 ELAVL4P26378 380 aaKnown RBP20.45■□□□□ 0.86
VSX1-205ENST00000429762 EPHA2P29317 976 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 TRHRP34981 398 aaPredicted RBP20.45■□□□□ 0.86
VSX1-205ENST00000429762 RAD23AP54725 363 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 IL11RAQ14626 422 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 LARS2Q15031 903 aaKnown RBP20.45■□□□□ 0.86
VSX1-205ENST00000429762 USP51Q70EK9 711 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 ZSCAN1Q8NBB4 408 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 OR7G1Q8NGA0 311 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 RDH12Q96NR8 316 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 GAL3ST4Q96RP7 486 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 TGIF2Q9GZN2 237 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 Q9N2J8 555 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 SEMA4GQ9NTN9 838 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 ZNF232Q9UNY5 417 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 IGLV3-12A0A075B6K2 115 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 IDSB3KWA1 339 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 H0YAE9 185 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 MEN1O00255 615 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 CBFA2T3O75081 653 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 RGS8P57771 180 aaPredicted RBP20.45■□□□□ 0.86
VSX1-205ENST00000429762 MC2RQ01718 297 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 BLMHQ13867 455 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 PDZK1Q5T2W1 519 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 MRPL2Q5T653 305 aaKnown RBP20.45■□□□□ 0.86
VSX1-205ENST00000429762 OVCH1Q7RTY7 1134 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 BCORP1Q8N888 145 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 PLPP5Q8NEB5 264 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 ZNF555Q8NEP9 628 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 NRSN2Q9GZP1 204 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 PARD6AQ9NPB6 346 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 PRODH2Q9UF12 536 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 ACAD8Q9UKU7 415 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 CBLCQ9ULV8 474 aa20.45■□□□□ 0.86
VSX1-205ENST00000429762 DYRK3O43781 588 aa20.44■□□□□ 0.86
VSX1-205ENST00000429762 CPNE3O75131 537 aaKnown RBP20.44■□□□□ 0.86
VSX1-205ENST00000429762 IGKV3-11P04433 115 aa20.44■□□□□ 0.86
VSX1-205ENST00000429762 DBIP07108 87 aaKnown RBP20.44■□□□□ 0.86
VSX1-205ENST00000429762 HBQ1P09105 142 aa20.44■□□□□ 0.86
VSX1-205ENST00000429762 GKN3PP0CG01 181 aa20.44■□□□□ 0.86
VSX1-205ENST00000429762 HMGA2P52926 109 aa20.44■□□□□ 0.86
VSX1-205ENST00000429762 LIN52Q52LA3 116 aa20.44■□□□□ 0.86
VSX1-205ENST00000429762 PIK3C3Q8NEB9 887 aa20.44■□□□□ 0.86
VSX1-205ENST00000429762 GTPBP3Q969Y2 492 aaKnown RBP20.44■□□□□ 0.86
VSX1-205ENST00000429762 DHRS1Q96LJ7 313 aa20.44■□□□□ 0.86
VSX1-205ENST00000429762 FNDC11Q9BVV2 318 aa20.44■□□□□ 0.86
VSX1-205ENST00000429762 MAN2C1Q9NTJ4 1040 aa20.44■□□□□ 0.86
VSX1-205ENST00000429762 FAM86C1Q9NVL1 165 aa20.44■□□□□ 0.86
VSX1-205ENST00000429762 KLHL28Q9NXS3 571 aa20.44■□□□□ 0.86
VSX1-205ENST00000429762 SLC39A1Q9NY26 324 aa20.44■□□□□ 0.86
VSX1-205ENST00000429762 PCDHGA8Q9Y5G5 932 aa20.44■□□□□ 0.86
VSX1-205ENST00000429762 WDFY3Q8IZQ1 3526 aa20.43■□□□□ 0.86
VSX1-205ENST00000429762 PRG2P13727 222 aa20.43■□□□□ 0.86
VSX1-205ENST00000429762 ETV5P41161 510 aa20.43■□□□□ 0.86
VSX1-205ENST00000429762 LSM11P83369 360 aaKnown RBP eCLIP20.43■□□□□ 0.86
VSX1-205ENST00000429762 PLAURQ03405 335 aa20.43■□□□□ 0.86
VSX1-205ENST00000429762 Q6ZPB1 254 aaPredicted RBP20.43■□□□□ 0.86
VSX1-205ENST00000429762 PRR22Q8IZ63 422 aa20.43■□□□□ 0.86
VSX1-205ENST00000429762 AQP11Q8NBQ7 271 aa20.43■□□□□ 0.86
VSX1-205ENST00000429762 EFHD2Q96C19 240 aaPredicted RBP20.43■□□□□ 0.86
VSX1-205ENST00000429762 PRRC1Q96M27 445 aa20.43■□□□□ 0.86
VSX1-205ENST00000429762 NXF5Q9H1B4 397 aaKnown RBP20.43■□□□□ 0.86
VSX1-205ENST00000429762 LOC100130705A0A1B0GUX0 176 aa20.43■□□□□ 0.86
VSX1-205ENST00000429762 CDC14CA4D256 554 aa20.43■□□□□ 0.86
VSX1-205ENST00000429762 THBS1P07996 1170 aa20.43■□□□□ 0.86
VSX1-205ENST00000429762 NID1P14543 1247 aa20.43■□□□□ 0.86
VSX1-205ENST00000429762 CLK3P49761 638 aaKnown RBP20.43■□□□□ 0.86
VSX1-205ENST00000429762 TAS2R41P59536 307 aa20.43■□□□□ 0.86
VSX1-205ENST00000429762 TCF15Q12870 199 aa20.43■□□□□ 0.86
VSX1-205ENST00000429762 ANKRD37Q7Z713 158 aa20.43■□□□□ 0.86
VSX1-205ENST00000429762 C9orf40Q8IXQ3 194 aa20.43■□□□□ 0.86
VSX1-205ENST00000429762 ZNF786Q8N393 782 aa20.43■□□□□ 0.86
VSX1-205ENST00000429762 PRSS33Q8NF86 280 aa20.43■□□□□ 0.86
VSX1-205ENST00000429762 OR14A16Q8NHC5 309 aa20.43■□□□□ 0.86
VSX1-205ENST00000429762 PHOX2BQ99453 314 aa20.43■□□□□ 0.86
VSX1-205ENST00000429762 PNPLA3Q9NST1 481 aa20.43■□□□□ 0.86
VSX1-205ENST00000429762 FLRT3Q9NZU0 649 aa20.43■□□□□ 0.86
VSX1-205ENST00000429762 SCOCQ9UIL1 159 aa20.43■□□□□ 0.86
VSX1-205ENST00000429762 GASTP01350 101 aa20.42■□□□□ 0.86
VSX1-205ENST00000429762 CCNYL3P0C7X3 344 aa20.42■□□□□ 0.86
VSX1-205ENST00000429762 GSSP48637 474 aa20.42■□□□□ 0.86
VSX1-205ENST00000429762 TPD52P55327 224 aaPredicted RBP20.42■□□□□ 0.86
VSX1-205ENST00000429762 INSM1Q01101 510 aaPredicted RBP20.42■□□□□ 0.86
VSX1-205ENST00000429762 RFX4Q33E94 735 aa20.42■□□□□ 0.86
VSX1-205ENST00000429762 DCST1Q5T197 706 aa20.42■□□□□ 0.86
VSX1-205ENST00000429762 PODNL1Q6PEZ8 512 aa20.42■□□□□ 0.86
VSX1-205ENST00000429762 DAZLQ92904 295 aaKnown RBP20.42■□□□□ 0.86
VSX1-205ENST00000429762 SLC46A1Q96NT5 459 aa20.42■□□□□ 0.86
VSX1-205ENST00000429762 MCHR1Q99705 422 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms