RNA–Protein interactions for RNA: ENST00000419300.3

LINC00963-202, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 9,557 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-202ENST00000419300 TLR9Q9NR96 1032 aa9.53□□□□□ -0.88
LINC00963-202ENST00000419300 TREX1Q9NSU2 369 aa9.53□□□□□ -0.88
LINC00963-202ENST00000419300 FAM212BQ9NTI7 297 aaPredicted RBP9.53□□□□□ -0.88
LINC00963-202ENST00000419300 SEMA4GQ9NTN9 838 aa9.53□□□□□ -0.88
LINC00963-202ENST00000419300 STRCP1A6NGW2 1772 aa9.53□□□□□ -0.88
LINC00963-202ENST00000419300 DDCP20711 480 aa9.53□□□□□ -0.88
LINC00963-202ENST00000419300 PIGFQ07326 219 aa9.53□□□□□ -0.88
LINC00963-202ENST00000419300 OR4M1Q8NGD0 313 aa9.53□□□□□ -0.88
LINC00963-202ENST00000419300 PHYHIPQ92561 330 aa9.53□□□□□ -0.88
LINC00963-202ENST00000419300 SORCS2Q96PQ0 1159 aa9.53□□□□□ -0.88
LINC00963-202ENST00000419300 C17orf62Q9BQA9 187 aa9.53□□□□□ -0.88
LINC00963-202ENST00000419300 SLC22A11Q9NSA0 550 aa9.53□□□□□ -0.88
LINC00963-202ENST00000419300 CLEC4EQ9ULY5 219 aa9.53□□□□□ -0.88
LINC00963-202ENST00000419300 NARSO43776 548 aaKnown RBP9.53□□□□□ -0.88
LINC00963-202ENST00000419300 HPGDSO60760 199 aa9.53□□□□□ -0.88
LINC00963-202ENST00000419300 H2BFMP0C1H6 154 aa9.53□□□□□ -0.88
LINC00963-202ENST00000419300 NFYAP23511 347 aaPredicted RBP9.53□□□□□ -0.88
LINC00963-202ENST00000419300 SNRPGP62308 76 aaKnown RBP9.53□□□□□ -0.88
LINC00963-202ENST00000419300 KCNJ8Q15842 424 aa9.53□□□□□ -0.88
LINC00963-202ENST00000419300 HIST2H3AQ71DI3 136 aa9.53□□□□□ -0.88
LINC00963-202ENST00000419300 DDIT4LQ96D03 193 aa9.53□□□□□ -0.88
LINC00963-202ENST00000419300 RANGRFQ9HD47 186 aaPredicted RBP9.53□□□□□ -0.88
LINC00963-202ENST00000419300 B3GNT2Q9NY97 397 aa9.53□□□□□ -0.88
LINC00963-202ENST00000419300 RHCGQ9UBD6 479 aa9.53□□□□□ -0.88
LINC00963-202ENST00000419300 CACNA1IQ9P0X4 2223 aa9.53□□□□□ -0.88
LINC00963-202ENST00000419300 FMO6PO60774 539 aa9.52□□□□□ -0.88
LINC00963-202ENST00000419300 ZNF43P17038 809 aa9.52□□□□□ -0.88
LINC00963-202ENST00000419300 LRIT3Q3SXY7 679 aa9.52□□□□□ -0.88
LINC00963-202ENST00000419300 C3orf49Q96BT1 292 aa9.52□□□□□ -0.88
LINC00963-202ENST00000419300 DNTTIP1Q9H147 329 aa9.52□□□□□ -0.88
LINC00963-202ENST00000419300 CNOT1A5YKK6 2376 aaKnown RBP9.52□□□□□ -0.88
LINC00963-202ENST00000419300 KLRG2A4D1S0 409 aaPredicted RBP9.52□□□□□ -0.88
LINC00963-202ENST00000419300 A6NIZ1 184 aa9.52□□□□□ -0.88
LINC00963-202ENST00000419300 LCKP06239 509 aa9.52□□□□□ -0.88
LINC00963-202ENST00000419300 ASGR2P07307 311 aa9.52□□□□□ -0.88
LINC00963-202ENST00000419300 RAP1BP61224 184 aa9.52□□□□□ -0.88
LINC00963-202ENST00000419300 RAP1AP62834 184 aa9.52□□□□□ -0.88
LINC00963-202ENST00000419300 SLC5A8Q8N695 610 aa9.52□□□□□ -0.88
LINC00963-202ENST00000419300 MMP28Q9H239 520 aa9.52□□□□□ -0.88
LINC00963-202ENST00000419300 HIF3AQ9Y2N7 669 aa9.52□□□□□ -0.88
LINC00963-202ENST00000419300 LCMT2O60294 686 aaKnown RBP9.52□□□□□ -0.89
LINC00963-202ENST00000419300 MMP2P08253 660 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 GDF5P43026 501 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 ERVK-25P63136 954 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 RPS21P63220 83 aaKnown RBP9.52□□□□□ -0.89
LINC00963-202ENST00000419300 TSSK4Q6SA08 328 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 ASPGQ86U10 573 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 ZFAND1Q8TCF1 268 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 FRS2Q8WU20 508 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 DPH2Q9BQC3 489 aaPredicted RBP9.52□□□□□ -0.89
LINC00963-202ENST00000419300 MGAMO43451 1857 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 A0A1W2PPL8 197 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 TVP23AA6NH52 213 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 DCNP07585 359 aaKnown RBP9.52□□□□□ -0.89
LINC00963-202ENST00000419300 GAAP10253 952 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 HLA-DMAP28067 261 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 CGB2Q6NT52 195 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 SLAIN1Q8ND83 568 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 ECHDC3Q96DC8 303 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 SLC30A3Q99726 388 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 PSD2Q9BQI7 771 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 FBRSQ9HAH7 460 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 POLMQ9NP87 494 aaPredicted RBP9.52□□□□□ -0.89
LINC00963-202ENST00000419300 C2orf42Q9NWW7 574 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 DKKL1Q9UK85 242 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 WASH4PA8MWX3 477 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 UBFD1O14562 309 aaKnown RBP9.52□□□□□ -0.89
LINC00963-202ENST00000419300 ADAM23O75077 832 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 S100A8P05109 93 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 AKR1C4P17516 323 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 NRLP54845 237 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 ARSIQ5FYB1 569 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 NDUFAF5Q5TEU4 345 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 TMEM185AQ8NFB2 350 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 OR6N2Q8NGY6 317 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 ZNF300Q96RE9 604 aaPredicted RBP9.52□□□□□ -0.89
LINC00963-202ENST00000419300 ELOVL2Q9NXB9 296 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 SDC3O75056 442 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 IL1RNP18510 177 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 SPRED3Q2MJR0 410 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 GKN2Q86XP6 184 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 ZSCAN4Q8NAM6 433 aaPredicted RBP9.52□□□□□ -0.89
LINC00963-202ENST00000419300 PRR11Q96HE9 360 aaPredicted RBP9.52□□□□□ -0.89
LINC00963-202ENST00000419300 SMOQ99835 787 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 SOX17Q9H6I2 414 aaPredicted RBP9.52□□□□□ -0.89
LINC00963-202ENST00000419300 TMEM212A6NML5 194 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 GIFP27352 417 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 LUMP51884 338 aaPredicted RBP9.52□□□□□ -0.89
LINC00963-202ENST00000419300 ACTR1AP61163 376 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 PSPHP78330 225 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 MALLQ13021 153 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 ELAVL3Q14576 367 aaKnown RBP9.52□□□□□ -0.89
LINC00963-202ENST00000419300 AMZ1Q400G9 498 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 AVPI1Q5T686 147 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 MAMDC2Q7Z304 686 aaPredicted RBP9.52□□□□□ -0.89
LINC00963-202ENST00000419300 ZER1Q7Z7L7 766 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 PIGMQ9H3S5 423 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 TRPM7Q96QT4 1865 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 MYOCOSA0A1B0GUC4 107 aa9.52□□□□□ -0.89
LINC00963-202ENST00000419300 ANHXE9PGG2 379 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms