RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 ANTXRLA6NF34 631 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 TRIM64CA6NLI5 447 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 MPPED1O15442 326 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 ABLIM3O94929 683 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 AMY2BP19961 511 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 GJA5P36382 358 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 MAP2K4P45985 399 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 ZNF92Q03936 586 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 MXD1Q05195 221 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 UBQLNLQ8IYU4 475 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 SPERTQ8NA61 448 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 NAT14Q8WUY8 206 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 SLC46A1Q96NT5 459 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 PIGQQ9BRB3 760 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 SEMA6CQ9H3T2 930 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 UNKLQ9H9P5 680 aaKnown RBP11.31□□□□□ -0.6
NEK9-210ENST00000557026 FAM72CH0Y354 149 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 CPNE6O95741 557 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 CHRM5P08912 532 aaPredicted RBP11.31□□□□□ -0.6
NEK9-210ENST00000557026 SLC35E2BP0CK96 405 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 BCL7AQ4VC05 210 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 RABL3Q5HYI8 236 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 FAM72AQ5TYM5 149 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 FAM72DQ6L9T8 149 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 FAM72BQ86X60 149 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 GRAMD2AQ8IUY3 354 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 ARMC5Q96C12 935 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 FUZQ9BT04 418 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 B3GAT1Q9P2W7 334 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 RNF6Q9Y252 685 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 MTHFD2P13995 350 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 SELEP16581 610 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 PEX2P28328 305 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 EIF2S3P41091 472 aaKnown RBP11.3□□□□□ -0.6
NEK9-210ENST00000557026 MTNR1AP48039 350 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 ATP1B3P54709 279 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 CTXN1P60606 82 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 SCGB2B2Q4G0G5 96 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 CLVS2Q5SYC1 327 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 ARSKQ6UWY0 536 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 OR5K2Q8NHB8 316 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 RNF128Q8TEB7 428 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 MSI2Q96DH6 328 aaKnown RBP11.3□□□□□ -0.6
NEK9-210ENST00000557026 CCDC115Q96NT0 180 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 C7orf50Q9BRJ6 194 aaKnown RBP11.3□□□□□ -0.6
NEK9-210ENST00000557026 ULBP3Q9BZM4 244 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 LINC00597Q9H2U6 94 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 FAM118AQ9NWS6 357 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 SLC7A8Q9UHI5 535 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 FGF3P11487 239 aaPredicted RBP11.3□□□□□ -0.6
NEK9-210ENST00000557026 HIST1H1TP22492 207 aaPredicted RBP11.3□□□□□ -0.6
NEK9-210ENST00000557026 PRKACBP22694 351 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 SIM1P81133 766 aaPredicted RBP11.3□□□□□ -0.6
NEK9-210ENST00000557026 RPE65Q16518 533 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 TSTQ16762 297 aaKnown RBP11.3□□□□□ -0.6
NEK9-210ENST00000557026 SLC5A12Q1EHB4 618 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 CPZQ66K79 652 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 SLC22A16Q86VW1 577 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 WDTC1Q8N5D0 677 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 DPH2Q9BQC3 489 aaPredicted RBP11.3□□□□□ -0.6
NEK9-210ENST00000557026 CBLCQ9ULV8 474 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 NRXN3Q9Y4C0 1643 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 CCDC88AQ3V6T2 1871 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 GLOD5A6NK44 160 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 FAM155AB1AL88 458 aaPredicted RBP11.3□□□□□ -0.6
NEK9-210ENST00000557026 ITM2AO43736 263 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 RFPL1O75677 317 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 VAMP1P23763 118 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 CHMP24386 653 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 RHEBQ15382 184 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 SLC35G1Q2M3R5 365 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 ZNF554Q86TJ5 538 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 MKXQ8IYA7 352 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 OR7G3Q8NG95 312 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 EBF4Q9BQW3 602 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 OPA3Q9H6K4 179 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 ZNF337Q9Y3M9 751 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 A0A1B0GVT2 93 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 NAP1L6A6NFF2 107 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 SDC3O75056 442 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 SLC16A8O95907 504 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 FASLGP48023 281 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 TRAPPC6BQ86SZ2 158 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 TEX19Q8NA77 164 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 STEAP2Q8NFT2 490 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 FUBP1Q96AE4 644 aaKnown RBP11.3□□□□□ -0.6
NEK9-210ENST00000557026 IL17FQ96PD4 163 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 UHRF1Q96T88 793 aaPredicted RBP11.3□□□□□ -0.6
NEK9-210ENST00000557026 ZNF160Q9HCG1 818 aa11.3□□□□□ -0.6
NEK9-210ENST00000557026 NPIPB15A6NHN6 443 aaPredicted RBP11.29□□□□□ -0.6
NEK9-210ENST00000557026 C9JVG2 144 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 MRPL33O75394 65 aaKnown RBP11.29□□□□□ -0.6
NEK9-210ENST00000557026 ZNF140P52738 457 aaPredicted RBP11.29□□□□□ -0.6
NEK9-210ENST00000557026 C14orf28Q4W4Y0 310 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 TMEM205Q6UW68 189 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 NOXA1Q86UR1 476 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 LNX2Q8N448 690 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 ZNF454Q8N9F8 522 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 ACOT4Q8N9L9 421 aa11.29□□□□□ -0.6
NEK9-210ENST00000557026 OR51G2Q8NGK0 314 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms