RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 ZNF382Q96SR6 550 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 MCHR1Q99705 422 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 MMP27Q9H306 513 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 ASF1BQ9NVP2 202 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 LRIT1Q9P2V4 623 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 PRAMEF11O60813 436 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 RPL35P42766 123 aaKnown RBP11.48□□□□□ -0.57
PCF11-201ENST00000298281 C4orf17Q53FE4 359 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 MS4A13Q5J8X5 152 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 AGAP7PQ5VUJ5 663 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 AGAP6Q5VW22 663 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 METTL25Q8N6Q8 603 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 OR4N2Q8NGD1 307 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 OR8J3Q8NGG0 315 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 AGAP4Q96P64 663 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 DNASE1P24855 282 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 FOXN2P32314 431 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 SLC27A4Q6P1M0 643 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 CMTM8Q8IZV2 173 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 BMFQ96LC9 184 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 CCDC74BQ96LY2 380 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 ACSL6Q9UKU0 697 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 ZNF860A6NHJ4 632 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 F8W036 122 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 BHLHE40O14503 412 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 RGS9O75916 674 aaPredicted RBP11.48□□□□□ -0.57
PCF11-201ENST00000298281 BCAS2O75934 225 aaPredicted RBP11.48□□□□□ -0.57
PCF11-201ENST00000298281 BLOC1S1P78537 153 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 PDE7AQ13946 482 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 PLCXD3Q63HM9 321 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 ATG9BQ674R7 924 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 TXNDC8Q6A555 127 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 OR2T33Q8NG76 320 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 DCUN1D4Q92564 292 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 SUSD2Q9UGT4 822 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 SLITRK5O94991 958 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 CT45A6P0DMU7 189 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 CT45A5P0DMU8 189 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 CT45A7P0DMV0 189 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 CT45A8P0DMV1 189 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 CT45A9P0DMV2 189 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 C7P10643 843 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 NAA10P41227 235 aaPredicted RBP11.48□□□□□ -0.57
PCF11-201ENST00000298281 RAB7AP51149 207 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 COL9A2Q14055 689 aaPredicted RBP11.48□□□□□ -0.57
PCF11-201ENST00000298281 CT45A2Q5DJT8 189 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 CT45A1Q5HYN5 189 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 CT45A3Q8NHU0 189 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 MVB12BQ9H7P6 319 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 MEPEQ9NQ76 525 aaPredicted RBP11.48□□□□□ -0.57
PCF11-201ENST00000298281 CUTCQ9NTM9 273 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 ZDHHC2Q9UIJ5 367 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 SALL4Q9UJQ4 1053 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 INSL5Q9Y5Q6 135 aa11.48□□□□□ -0.57
PCF11-201ENST00000298281 A0A1W2PQ09 198 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 RORAP35398 523 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 ACTA2P62736 377 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 ACTG2P63267 376 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 MOGQ16653 247 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 FJX1Q86VR8 437 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 REEP6Q96HR9 211 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 UHRF2Q96PU4 802 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 ZDHHC18Q9NUE0 388 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 SRRDQ9UH36 339 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 IGKV6D-41A0A0C4DH26 115 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 G6PDP11413 515 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 ADRB3P13945 408 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 MTHFD2P13995 350 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 BDKRB1P46663 353 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 NUDT6P53370 316 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 TMEM115Q12893 351 aaPredicted RBP11.47□□□□□ -0.57
PCF11-201ENST00000298281 SUSD1Q6UWL2 747 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 ZNF836Q6ZNA1 936 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 GALNT12Q8IXK2 581 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 TMEM130Q8N3G9 435 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 INTS12Q96CB8 462 aaKnown RBP11.47□□□□□ -0.57
PCF11-201ENST00000298281 FBXL18Q96ME1 805 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 PLEK2Q9NYT0 353 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 FAM189A1O60320 539 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 CHRM4P08173 479 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 SMIM17P0DL12 118 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 WDR4P57081 412 aaKnown RBP11.47□□□□□ -0.57
PCF11-201ENST00000298281 METTL2BQ6P1Q9 378 aaKnown RBP11.47□□□□□ -0.57
PCF11-201ENST00000298281 ZNF765Q7L2R6 523 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 C2CD4AQ8NCU7 369 aaPredicted RBP11.47□□□□□ -0.57
PCF11-201ENST00000298281 OR5L2Q8NGL0 311 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 TOMM40LQ969M1 308 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 ZC3HAV1LQ96H79 300 aaKnown RBP11.47□□□□□ -0.57
PCF11-201ENST00000298281 ZNF419Q96HQ0 510 aaPredicted RBP11.47□□□□□ -0.57
PCF11-201ENST00000298281 SLIT2O94813 1529 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 ARPC4-TTLL3A0A0A6YYG9 625 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 H0YAE9 185 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 FAAHO00519 579 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 NPC1O15118 1278 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 TBX10O75333 385 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 MTX2O75431 263 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 UFM1P61960 85 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 ZNF805Q5CZA5 627 aa11.47□□□□□ -0.57
PCF11-201ENST00000298281 FAM199XQ6PEV8 388 aaPredicted RBP11.47□□□□□ -0.57
PCF11-201ENST00000298281 ZDHHC24Q6UX98 284 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms