RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 CLDN18P56856 261 aa16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 SLC7A5Q01650 507 aa16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 GLYR1Q49A26 553 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 CYP27C1Q4G0S4 372 aa16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 GALNT18Q6P9A2 607 aa16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 PRSS57Q6UWY2 283 aa16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 SYT10Q6XYQ8 523 aa16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 MEIOBQ8N635 442 aa16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 RDH11Q8TC12 318 aa16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 METTL6Q8TCB7 284 aa16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 MTBPQ96DY7 904 aa16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 ZNF382Q96SR6 550 aa16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 G6PC3Q9BUM1 346 aa16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 PTGES2Q9H7Z7 377 aa16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 SLC35C2Q9NQQ7 365 aa16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 SIRT5Q9NXA8 310 aa16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 STOML1Q9UBI4 398 aa16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 FN1P02751 2386 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 NSD1Q96L73 2696 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 A0A087WV62 115 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 A0A1W2PNV4 684 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 GNG14A0A1W2PPG7 69 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 SERTM1A2A2V5 107 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 A8MT66 165 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 MANBAO00462 879 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 COQ9O75208 318 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 TNFRSF21O75509 655 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 TNFSF13O75888 250 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 SUPT7LO94864 414 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 GRK2P25098 689 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 STARP49675 285 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 NAA20P61599 178 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 MRPS35P82673 323 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 ACSM2AQ08AH3 577 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 ACSM2BQ68CK6 577 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 DESI1Q6ICB0 168 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 TIFABQ6ZNK6 161 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 SLC22A9Q8IVM8 553 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 TMEM151AQ8N4L1 468 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 OR4K17Q8NGC6 315 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 CDC42EP4Q9H3Q1 356 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 SENP1Q9P0U3 644 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 GRID1Q9ULK0 1009 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 ABCG2Q9UNQ0 655 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 OR10H1Q9Y4A9 318 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 TESMINQ9Y4I5 508 aa16.13■□□□□ 0.17
SHKBP1-227ENST00000602011 A0A087WUV0 522 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 SLC22A20A6NK97 555 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 TTC36A6NLP5 189 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 TRIM49D1C9J1S8 452 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 H3BQF6 201 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 CTIFO43310 598 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 PCDH7O60245 1069 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 OR4F21O95013 312 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 ENO1P06733 434 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 IMPDH1P20839 514 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 HMOX2P30519 316 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 CD79BP40259 229 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 GAS1P54826 345 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 PSMD4P55036 377 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 PKNOX1P55347 436 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 POU4F3Q15319 338 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 LTB4RQ15722 352 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 GPRIN3Q6ZVF9 776 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 KRTAP1-3Q8IUG1 177 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 P3H2Q8IVL5 708 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 FAM9CQ8IZT9 166 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 CDYL2Q8N8U2 506 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 STARD4Q96DR4 205 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 FMO2Q99518 471 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 TAS2R7Q9NYW3 318 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 PPP4R1LQ9P1A2 415 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 HEY2Q9UBP5 337 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 ZNF225Q9UK10 706 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 FBXL2Q9UKC9 423 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 ZNF175Q9Y473 711 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 JMJD1CQ15652 2540 aa16.12■□□□□ 0.17
SHKBP1-227ENST00000602011 POC1B-GALNT4F8VUJ3 575 aa16.11■□□□□ 0.17
SHKBP1-227ENST00000602011 PPP6CO00743 305 aa16.11■□□□□ 0.17
SHKBP1-227ENST00000602011 EMC8O43402 210 aa16.11■□□□□ 0.17
SHKBP1-227ENST00000602011 SMPD2O60906 423 aa16.11■□□□□ 0.17
SHKBP1-227ENST00000602011 IL3P08700 152 aa16.11■□□□□ 0.17
SHKBP1-227ENST00000602011 IFI6P09912 130 aa16.11■□□□□ 0.17
SHKBP1-227ENST00000602011 CD8BP10966 210 aa16.11■□□□□ 0.17
SHKBP1-227ENST00000602011 DUSP2Q05923 314 aa16.11■□□□□ 0.17
SHKBP1-227ENST00000602011 GLE1Q53GS7 698 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-227ENST00000602011 ZNF678Q5SXM1 525 aa16.11■□□□□ 0.17
SHKBP1-227ENST00000602011 CXorf67Q86X51 503 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-227ENST00000602011 SLC44A2Q8IWA5 706 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-227ENST00000602011 GCNT2Q8N0V5 402 aa16.11■□□□□ 0.17
SHKBP1-227ENST00000602011 FADS6Q8N9I5 356 aa16.11■□□□□ 0.17
SHKBP1-227ENST00000602011 SIMC1Q8NDZ2 872 aa16.11■□□□□ 0.17
SHKBP1-227ENST00000602011 OR9A2Q8NGT5 310 aa16.11■□□□□ 0.17
SHKBP1-227ENST00000602011 C16orf78Q8WTQ4 265 aa16.11■□□□□ 0.17
SHKBP1-227ENST00000602011 PGM2Q96G03 612 aa16.11■□□□□ 0.17
SHKBP1-227ENST00000602011 BBS4Q96RK4 519 aa16.11■□□□□ 0.17
SHKBP1-227ENST00000602011 FOLH1BQ9HBA9 442 aa16.11■□□□□ 0.17
SHKBP1-227ENST00000602011 FANCFQ9NPI8 374 aa16.11■□□□□ 0.17
SHKBP1-227ENST00000602011 FBN3Q75N90 2809 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms