RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 BEST1O76090 585 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 IFNA1P01562 189 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 TAS2R50P59544 299 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 OR2B8PP59922 312 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 GHRHRQ02643 423 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 GNMTQ14749 295 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 ACSM3Q53FZ2 586 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 VASNQ6EMK4 673 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 CATSPERGQ6ZRH7 1159 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 GPC2Q8N158 579 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 CPA6Q8N4T0 437 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 OR7D4Q8NG98 312 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 OR6K2Q8NGY2 324 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 ELP5Q8TE02 316 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 SPRYD4Q8WW59 207 aaPredicted RBP9.8□□□□□ -0.84
LIN54-202ENST00000442461 WDR77Q9BQA1 342 aaPredicted RBP9.8□□□□□ -0.84
LIN54-202ENST00000442461 ALG8Q9BVK2 526 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 CNTNAP3Q9BZ76 1288 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 MKKSQ9NPJ1 570 aaPredicted RBP9.8□□□□□ -0.84
LIN54-202ENST00000442461 POMT2Q9UKY4 750 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 PUS1Q9Y606 427 aaKnown RBP eCLIP9.8□□□□□ -0.84
LIN54-202ENST00000442461 PDYNP01213 254 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 NDUFV2P19404 249 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 PTAFRP25105 342 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 GKP32189 559 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 RPS25P62851 125 aaKnown RBP9.8□□□□□ -0.84
LIN54-202ENST00000442461 PTPRRQ15256 657 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 TMEM41BQ5BJD5 291 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 MBOAT1Q6ZNC8 495 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 SH2D5Q6ZV89 423 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 SERPINA12Q8IW75 414 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 SKA3Q8IX90 412 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 CLECL1Q8IZS7 167 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 TP53I13Q8NBR0 393 aaPredicted RBP9.8□□□□□ -0.84
LIN54-202ENST00000442461 ACVR1CQ8NER5 493 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 FUBP1Q96AE4 644 aaKnown RBP9.8□□□□□ -0.84
LIN54-202ENST00000442461 MCHR1Q99705 422 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 IER2Q9BTL4 223 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 PITHD1Q9GZP4 211 aaPredicted RBP9.8□□□□□ -0.84
LIN54-202ENST00000442461 APMAPQ9HDC9 416 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 LRFN1Q9P244 771 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 FAM198AQ9UFP1 575 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 NDRG4Q9ULP0 352 aaKnown RBP9.8□□□□□ -0.84
LIN54-202ENST00000442461 PIK3C2BO00750 1634 aa9.8□□□□□ -0.84
LIN54-202ENST00000442461 IRAK2O43187 625 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 ATG13O75143 517 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 TSPAN12O95859 305 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 KLK1P06870 262 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 SLC6A6P31641 620 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 UBE2KP61086 200 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 EEF1A1P68104 462 aaKnown RBP9.79□□□□□ -0.84
LIN54-202ENST00000442461 CAP1Q01518 475 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 EEF1A2Q05639 463 aaKnown RBP9.79□□□□□ -0.84
LIN54-202ENST00000442461 SNTB1Q13884 538 aaKnown RBP9.79□□□□□ -0.84
LIN54-202ENST00000442461 PTPRCAPQ14761 206 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 CARD16Q5EG05 197 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 SOHLH1Q5JUK2 328 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 EEF1A1P5Q5VTE0 462 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 STEAP2Q8NFT2 490 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 OR56A3Q8NH54 315 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 C20orf85Q9H1P6 137 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 LDAHQ9H6V9 325 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 PLEKHA1Q9HB21 404 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 LUZP4Q9P127 313 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 A0A1W2PQH9 124 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 NPIPA7E9PJI5 369 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 NPIPA8P0DM63 369 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 HAPLN1P10915 354 aaPredicted RBP9.79□□□□□ -0.84
LIN54-202ENST00000442461 CPN1P15169 458 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 NME1P15531 152 aaKnown RBP9.79□□□□□ -0.84
LIN54-202ENST00000442461 SOX9P48436 509 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 MASP1P48740 699 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 INCA1Q0VD86 236 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 SLBPQ14493 270 aaKnown RBP eCLIP9.79□□□□□ -0.84
LIN54-202ENST00000442461 NFATC4Q14934 902 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 FAM182BQ5T319 152 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 HLA-DQA1Q5Y7H0 255 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 SLC6A19Q695T7 634 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 LETMD1Q6P1Q0 360 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 TPGS1Q6ZTW0 290 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 SLC9B2Q86UD5 537 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 RASGEF1AQ8N9B8 481 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 NAXEQ8NCW5 288 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 OR5W2Q8NH69 310 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 ZNF384Q8TF68 577 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 SFT2D1Q8WV19 159 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 RAB39BQ96DA2 213 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 MALSU1Q96EH3 234 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 PIGQQ9BRB3 760 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 WDR83Q9BRX9 315 aaKnown RBP9.79□□□□□ -0.84
LIN54-202ENST00000442461 PDZD7Q9H5P4 517 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 USP21Q9UK80 565 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 K7EPK0 472 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 ERVH48-1M5A8F1 160 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 TGOLN2O43493 480 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 RBMXL2O75526 392 aaKnown RBP9.79□□□□□ -0.84
LIN54-202ENST00000442461 LGALS2P05162 132 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 INHBBP09529 407 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 ARSAP15289 507 aa9.79□□□□□ -0.84
LIN54-202ENST00000442461 UQCRC2P22695 453 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms