RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 TIMP4Q99727 224 aa9.69□□□□□ -0.86
NELFE-213ENST00000494956 ENKD1Q9H0I2 346 aa9.69□□□□□ -0.86
NELFE-213ENST00000494956 GLIPR2Q9H4G4 154 aa9.69□□□□□ -0.86
NELFE-213ENST00000494956 PPCSQ9HAB8 311 aa9.69□□□□□ -0.86
NELFE-213ENST00000494956 MYNNQ9NPC7 610 aa9.69□□□□□ -0.86
NELFE-213ENST00000494956 SERHLQ9NQF3 203 aa9.69□□□□□ -0.86
NELFE-213ENST00000494956 RRAGDQ9NQL2 400 aaPredicted RBP9.69□□□□□ -0.86
NELFE-213ENST00000494956 GIMAP4Q9NUV9 329 aa9.69□□□□□ -0.86
NELFE-213ENST00000494956 QPCTLQ9NXS2 382 aa9.69□□□□□ -0.86
NELFE-213ENST00000494956 KLRF1Q9NZS2 232 aa9.69□□□□□ -0.86
NELFE-213ENST00000494956 SENP1Q9P0U3 644 aa9.69□□□□□ -0.86
NELFE-213ENST00000494956 B4GALT7Q9UBV7 327 aa9.69□□□□□ -0.86
NELFE-213ENST00000494956 PRODH2Q9UF12 536 aa9.69□□□□□ -0.86
NELFE-213ENST00000494956 BAIAP2L1Q9UHR4 511 aa9.69□□□□□ -0.86
NELFE-213ENST00000494956 CFL2Q9Y281 166 aa9.69□□□□□ -0.86
NELFE-213ENST00000494956 DNAJC15Q9Y5T4 150 aa9.69□□□□□ -0.86
NELFE-213ENST00000494956 APCP25054 2843 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 PRAMEF25A6NGN4 478 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 UPK1AO00322 258 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 TO15178 435 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 TSPAN2O60636 221 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 WDR1O75083 606 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 SNX4O95219 450 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 HPNP05981 417 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 BMP7P18075 431 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 ZFP36L2P47974 494 aaKnown RBP9.68□□□□□ -0.86
NELFE-213ENST00000494956 RPL38P63173 70 aaKnown RBP9.68□□□□□ -0.86
NELFE-213ENST00000494956 PSG6Q00889 435 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 IFFO1Q0D2I5 559 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 ZNF155Q12901 538 aaPredicted RBP9.68□□□□□ -0.86
NELFE-213ENST00000494956 ERCC6LQ2NKX8 1250 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 UGT3A2Q3SY77 523 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 GALNTL6Q49A17 601 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 RFTN2Q52LD8 501 aaPredicted RBP9.68□□□□□ -0.86
NELFE-213ENST00000494956 ARL13AQ5H913 290 aaPredicted RBP9.68□□□□□ -0.86
NELFE-213ENST00000494956 CES4AQ5XG92 561 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 KANK2Q63ZY3 851 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 TIGD3Q6B0B8 471 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 ACAD11Q709F0 780 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 GDF7Q7Z4P5 450 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 ACBD4Q8NC06 268 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 TNIP2Q8NFZ5 429 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.68□□□□□ -0.86
NELFE-213ENST00000494956 COL21A1Q96P44 957 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 TSSK3Q96PN8 268 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 BTBD9Q96Q07 612 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 SECISBP2Q96T21 854 aaKnown RBP9.68□□□□□ -0.86
NELFE-213ENST00000494956 UGT2B28Q9BY64 529 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 RTN4RQ9BZR6 473 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 IQCGQ9H095 443 aaKnown RBP9.68□□□□□ -0.86
NELFE-213ENST00000494956 LRTM1Q9HBL6 345 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 MIEF1Q9NQG6 463 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 C1orf109Q9NX04 203 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 LGALS13Q9UHV8 139 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 FBXL2Q9UKC9 423 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 CAMK2AQ9UQM7 478 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 DCHS2Q6V1P9 2916 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 ABCA12Q86UK0 2595 aa9.68□□□□□ -0.86
NELFE-213ENST00000494956 LRBAP50851 2863 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 DOCK7Q96N67 2140 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 SLC28A1O00337 649 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 PIP5K1BO14986 540 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 LSM1O15116 133 aaKnown RBP9.67□□□□□ -0.86
NELFE-213ENST00000494956 ACOX3O15254 700 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 SCO2O43819 266 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 PLOD3O60568 738 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 SLU7O95391 586 aaKnown RBP9.67□□□□□ -0.86
NELFE-213ENST00000494956 CYP4B1P13584 511 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 NAGAP17050 411 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 SDC1P18827 310 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 MPIP34949 423 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 PTGER4P35408 488 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 RFX3P48380 749 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 STARP49675 285 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 AGFG1P52594 562 aaKnown RBP9.67□□□□□ -0.86
NELFE-213ENST00000494956 DLX5P56178 289 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 DCAF7P61962 342 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 RPP38P78345 283 aaKnown RBP9.67□□□□□ -0.86
NELFE-213ENST00000494956 HSPB3Q12988 150 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 ACSF3Q4G176 576 aaPredicted RBP9.67□□□□□ -0.86
NELFE-213ENST00000494956 VASNQ6EMK4 673 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 SLC30A6Q6NXT4 461 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 LARP4Q71RC2 724 aaKnown RBP eCLIP9.67□□□□□ -0.86
NELFE-213ENST00000494956 GALNT10Q86SR1 603 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 FBXO30Q8TB52 745 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 TWIST2Q8WVJ9 160 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 PKNOX2Q96KN3 472 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 LURAP1Q96LR2 239 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 C3orf30Q96M34 536 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 AMDHD1Q96NU7 426 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 PARD6BQ9BYG5 372 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 ZNF395Q9H8N7 513 aaPredicted RBP9.67□□□□□ -0.86
NELFE-213ENST00000494956 KCNJ16Q9NPI9 418 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 EQTNQ9NQ60 294 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 MKS1Q9NXB0 559 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 PDZD2O15018 2839 aa9.67□□□□□ -0.86
NELFE-213ENST00000494956 CREBBPQ92793 2442 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 GXYLT2A0PJZ3 443 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 OR6C70A6NIJ9 312 aa9.66□□□□□ -0.86
NELFE-213ENST00000494956 NPIPB8E9PQR5 432 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms