RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 TRNT1Q96Q11 434 aaKnown RBP19.37■□□□□ 0.69
PNKP-203ENST00000593946 STACQ99469 402 aa19.37■□□□□ 0.69
PNKP-203ENST00000593946 PIGUQ9H490 435 aa19.37■□□□□ 0.69
PNKP-203ENST00000593946 IL1RAPQ9NPH3 570 aa19.37■□□□□ 0.69
PNKP-203ENST00000593946 EXD2Q9NVH0 621 aa19.37■□□□□ 0.69
PNKP-203ENST00000593946 FAM149AA5PLN7 773 aa19.37■□□□□ 0.69
PNKP-203ENST00000593946 SYNDIG1LA6NDD5 238 aa19.37■□□□□ 0.69
PNKP-203ENST00000593946 C17orf105B2RV13 164 aa19.37■□□□□ 0.69
PNKP-203ENST00000593946 ITIH1P19827 911 aa19.37■□□□□ 0.69
PNKP-203ENST00000593946 PGDP52209 483 aa19.37■□□□□ 0.69
PNKP-203ENST00000593946 KCNJ10P78508 379 aa19.37■□□□□ 0.69
PNKP-203ENST00000593946 ELAVL1Q15717 326 aaKnown RBP19.37■□□□□ 0.69
PNKP-203ENST00000593946 NSDHLQ15738 373 aa19.37■□□□□ 0.69
PNKP-203ENST00000593946 C16orf62Q7Z3J2 963 aa19.37■□□□□ 0.69
PNKP-203ENST00000593946 LZICQ8WZA0 190 aa19.37■□□□□ 0.69
PNKP-203ENST00000593946 FKBP10Q96AY3 582 aa19.37■□□□□ 0.69
PNKP-203ENST00000593946 ZNF607Q96SK3 696 aa19.37■□□□□ 0.69
PNKP-203ENST00000593946 TACO1Q9BSH4 297 aaKnown RBP19.37■□□□□ 0.69
PNKP-203ENST00000593946 CNPPD1Q9BV87 410 aa19.37■□□□□ 0.69
PNKP-203ENST00000593946 SLC26A1Q9H2B4 701 aa19.37■□□□□ 0.69
PNKP-203ENST00000593946 PNO1Q9NRX1 252 aaKnown RBP19.37■□□□□ 0.69
PNKP-203ENST00000593946 ERVK-19Q9WJR5 959 aa19.37■□□□□ 0.69
PNKP-203ENST00000593946 PCDHGA8Q9Y5G5 932 aa19.37■□□□□ 0.69
PNKP-203ENST00000593946 GPC6Q9Y625 555 aaPredicted RBP19.37■□□□□ 0.69
PNKP-203ENST00000593946 VSTM2BA6NLU5 285 aa19.36■□□□□ 0.69
PNKP-203ENST00000593946 A8MVJ9 347 aa19.36■□□□□ 0.69
PNKP-203ENST00000593946 PRAMEF2O60811 474 aa19.36■□□□□ 0.69
PNKP-203ENST00000593946 MFN2O95140 757 aa19.36■□□□□ 0.69
PNKP-203ENST00000593946 H6PDO95479 791 aa19.36■□□□□ 0.69
PNKP-203ENST00000593946 LDLRP01130 860 aa19.36■□□□□ 0.69
PNKP-203ENST00000593946 ALOX5P09917 674 aa19.36■□□□□ 0.69
PNKP-203ENST00000593946 ETS2P15036 469 aa19.36■□□□□ 0.69
PNKP-203ENST00000593946 CLDN6P56747 220 aa19.36■□□□□ 0.69
PNKP-203ENST00000593946 RAB15P59190 212 aa19.36■□□□□ 0.69
PNKP-203ENST00000593946 LRRC36Q1X8D7 754 aa19.36■□□□□ 0.69
PNKP-203ENST00000593946 GPAT3Q53EU6 434 aa19.36■□□□□ 0.69
PNKP-203ENST00000593946 LCN10Q6JVE6 187 aa19.36■□□□□ 0.69
PNKP-203ENST00000593946 FKBP9P1Q75LS8 142 aa19.36■□□□□ 0.69
PNKP-203ENST00000593946 ZDHHC21Q8IVQ6 265 aa19.36■□□□□ 0.69
PNKP-203ENST00000593946 BTBD2Q9BX70 525 aa19.36■□□□□ 0.69
PNKP-203ENST00000593946 SLC38A1Q9H2H9 487 aa19.36■□□□□ 0.69
PNKP-203ENST00000593946 VCX3BQ9H321 246 aa19.36■□□□□ 0.69
PNKP-203ENST00000593946 CALML5Q9NZT1 146 aa19.36■□□□□ 0.69
PNKP-203ENST00000593946 IFT80Q9P2H3 777 aaPredicted RBP19.36■□□□□ 0.69
PNKP-203ENST00000593946 HEMK1Q9Y5R4 338 aaPredicted RBP19.36■□□□□ 0.69
PNKP-203ENST00000593946 DSPPQ9NZW4 1301 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 A0A0G2JPF8 293 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 HNRNPCL2B2RXH8 293 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 HNRNPCL3B7ZW38 293 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 CLOCKO15516 846 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 PEX1O43933 1283 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 CSO75390 466 aaKnown RBP19.35■□□□□ 0.69
PNKP-203ENST00000593946 DEAF1O75398 565 aaPredicted RBP19.35■□□□□ 0.69
PNKP-203ENST00000593946 PRSS23O95084 383 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 MT-CO3P00414 261 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 ALBP02768 609 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 CLPSP04118 112 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 HNRNPCL4P0DMR1 293 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 TNNI3P19429 210 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 ETV5P41161 510 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 ZNF155Q12901 538 aaPredicted RBP19.35■□□□□ 0.69
PNKP-203ENST00000593946 ARHGAP11BQ3KRB8 267 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 RAB11FIP2Q7L804 512 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 OLIG3Q7RTU3 272 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 KRT73Q86Y46 540 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 TMEM151BQ8IW70 566 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 WDFY3Q8IZQ1 3526 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 ZNF615Q8N8J6 731 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 SMYD1Q8NB12 490 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 CHDHQ8NE62 594 aaPredicted RBP19.35■□□□□ 0.69
PNKP-203ENST00000593946 FBXL20Q96IG2 436 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 VSTM2LQ96N03 204 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 LMF2Q9BU23 707 aaKnown RBP19.35■□□□□ 0.69
PNKP-203ENST00000593946 ULBP3Q9BZM4 244 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 KLHL4Q9C0H6 718 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 FOLH1BQ9HBA9 442 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 SATB2Q9UPW6 733 aa19.35■□□□□ 0.69
PNKP-203ENST00000593946 ZFHX2Q9C0A1 2572 aaPredicted RBP19.35■□□□□ 0.69
PNKP-203ENST00000593946 CNOT3O75175 753 aaKnown RBP19.34■□□□□ 0.69
PNKP-203ENST00000593946 SOX30O94993 753 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 NKX2-2O95096 273 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 CD247P20963 164 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 AGXTP21549 392 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 VLDLRP98155 873 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 DUSP7Q16829 419 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 MLIPQ5VWP3 458 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 MRPL14Q6P1L8 145 aaKnown RBP19.34■□□□□ 0.69
PNKP-203ENST00000593946 DHRS13Q6UX07 377 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 SHISA6Q6ZSJ9 500 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 ARMC8Q8IUR7 673 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 KBTBD2Q8IY47 623 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 OR7G1Q8NGA0 311 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 SENP5Q96HI0 755 aaPredicted RBP19.34■□□□□ 0.69
PNKP-203ENST00000593946 C7orf34Q96L11 122 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 COL21A1Q96P44 957 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 RSPO3Q9BXY4 272 aaPredicted RBP19.34■□□□□ 0.69
PNKP-203ENST00000593946 OR10A5Q9H207 317 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 AKIRIN1Q9H9L7 192 aaPredicted RBP19.34■□□□□ 0.69
PNKP-203ENST00000593946 PCDHGB3Q9Y5G1 929 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 B3GALT1Q9Y5Z6 326 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms