RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	KCNS2	Q9ULS6	477 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	PROCR	Q9UNN8	238 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	MRPS33	Q9Y291	106 aa	Known RBP	7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	RNF115	Q9Y4L5	304 aa		7.71	□□□□□ -1.18
NIF3L1-206	ENST00000416651	GRID2IP	A4D2P6	1211 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	CTAGE9	A4FU28	777 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	GLOD5	A6NK44	160 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SMTNL1	A8MU46	457 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	CDC7	O00311	574 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SAP18	O00422	153 aa	Known RBP	7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	TP53I11	O14683	189 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	EMC8	O43402	210 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SNX4	O95219	450 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	CCDC166	P0CW27	439 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	CD8B	P10966	210 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	CCND1	P24385	295 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	GABRB3	P28472	473 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	MAGEA1	P43355	309 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SERPINB4	P48594	390 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	CLDN20	P56880	219 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	RWDD2B	P57060	319 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	STXBP1	P61764	594 aa	Known RBP	7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	FAM166A	Q6J272	317 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	RNF111	Q6ZNA4	994 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	RFLNB	Q8N5W9	214 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ADIPOR1	Q96A54	375 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	S100PBP	Q96BU1	408 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	FBXL8	Q96CD0	374 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	CCDC42	Q96M95	316 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	PINK1	Q9BXM7	581 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	TRIM2	Q9C040	744 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	REXO4	Q9GZR2	422 aa	Known RBP	7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	NXF5	Q9H1B4	397 aa	Known RBP	7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ACBD3	Q9H3P7	528 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	TAS2R10	Q9NYW0	307 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	KLHL42	Q9P2K6	505 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SLC17A6	Q9P2U8	582 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	DLGAP4	Q9Y2H0	992 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SPACA6	W5XKT8	324 aa		7.7	□□□□□ -1.18
NIF3L1-206	ENST00000416651	IGHV4-61	A0A0C4DH41	118 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	IQANK1	A0A1B0GTG1	560 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ZCWPW2	A0A1B0GU75	182 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	C2orf92	A0A1B0GVN3	265 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	KRTAP9-7	A8MTY7	169 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SHISA9	B4DS77	424 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	TMPRSS2	O15393	492 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SEC14L5	O43304	696 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	LIAS	O43766	372 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	EED	O75530	441 aa	Known RBP	7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	CLDN9	O95484	217 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	FTCD	O95954	541 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	CRH	P06850	196 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	C8G	P07360	202 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	C1GALT1C1L	P0DN25	315 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	COL6A2	P12110	1019 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	CD22	P20273	847 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	CPN2	P22792	545 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	CHM	P24386	653 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ATP5A1	P25705	553 aa	Known RBP	7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	BUD31	P41223	144 aa	Predicted RBP	7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	NPY2R	P49146	381 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	HNRNPH2	P55795	449 aa	Known RBP	7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	IRF9	Q00978	393 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	BSPH1	Q075Z2	132 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	TBL3	Q12788	808 aa	Known RBP	7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SERTAD2	Q14140	314 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	GGTLC2	Q14390	218 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	EFTUD2	Q15029	972 aa	Known RBP eCLIP	7.69	□□□□□ -1.18	2e-11	■■■■■ 41.9
NIF3L1-206	ENST00000416651	CYP27C1	Q4G0S4	372 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	PRR31	Q5SQ13	230 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	C11orf71	Q6IPW1	123 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SLC29A4	Q7RTT9	530 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	DTX2	Q86UW9	622 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	IFNE	Q86WN2	208 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	GPSM1	Q86YR5	675 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	TBC1D19	Q8N5T2	526 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ACOT4	Q8N9L9	421 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	BBOF1	Q8ND07	529 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	CAVIN3	Q969G5	261 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ESAM	Q96AP7	390 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	REPS1	Q96D71	796 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	SFXN2	Q96NB2	322 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	METTL7A	Q9H8H3	244 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	RNF122	Q9H9V4	155 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	FOLH1B	Q9HBA9	442 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ABHD10	Q9NUJ1	306 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	INTS10	Q9NVR2	710 aa	Known RBP	7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	CISD1	Q9NZ45	108 aa	Known RBP	7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	EXO1	Q9UQ84	846 aa	Known RBP	7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	PCDHGB1	Q9Y5G3	927 aa		7.69	□□□□□ -1.18
NIF3L1-206	ENST00000416651	PLCE1	Q9P212	2302 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	TMEM89	A2RUT3	159 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	BTNL10	A8MVZ5	291 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	UGT2B11	O75310	529 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	AIFM1	O95831	613 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	TGFA	P01135	160 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	CD3E	P07766	207 aa		7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	ALOX15	P16050	662 aa	Predicted RBP	7.68	□□□□□ -1.18
NIF3L1-206	ENST00000416651	USF1	P22415	310 aa	Predicted RBP	7.68	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms