RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 DFFBO76075 338 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 ASGR1P07306 291 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 DHPSP49366 369 aaPredicted RBP8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 PPP3R1P63098 170 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 FOXO1Q12778 655 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 GAMTQ14353 236 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 OR2A14Q96R47 310 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 PKP4Q99569 1192 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 PITX2Q99697 317 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 NTPCRQ9BSD7 190 aaKnown RBP8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 LHX5Q9H2C1 402 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 TMPRSS4Q9NRS4 437 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 TAS2R10Q9NYW0 307 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 APOC4-APOC2K7ER74 178 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 FZD9O00144 591 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 IMPA2O14732 288 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 ARPC1BO15143 372 aaKnown RBP8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 APOC2P02655 101 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 ADRB2P07550 413 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 STAG3L3P0CL85 134 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 ADRB3P13945 408 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 CAMK2GQ13555 558 aaPredicted RBP8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 PCGF3Q3KNV8 242 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 ARSJQ5FYB0 599 aaPredicted RBP8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 KLHL24Q6TFL4 600 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 OR4M1Q8NGD0 313 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 PTTG3PQ9NZH4 202 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 FZD6O60353 706 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 PTPN3P26045 913 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 SRP9P49458 86 aaKnown RBP8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 SNTB2Q13425 540 aaKnown RBP8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 ACOT1Q86TX2 421 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 BEST3Q8N1M1 668 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 FAM24BQ8N5W8 94 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 TSSK3Q96PN8 268 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 CYP2S1Q96SQ9 504 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 SLC25A32Q9H2D1 315 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 AGPAT4Q9NRZ5 378 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 TREM2Q9NZC2 230 aa8.59□□□□□ -1.03
GTF2A1-203ENST00000553612 A0A1W2PPH5 198 aa8.59□□□□□ -1.04
GTF2A1-203ENST00000553612 ERVV-1B6SEH8 477 aa8.59□□□□□ -1.04
GTF2A1-203ENST00000553612 TNFRSF11BO00300 401 aa8.59□□□□□ -1.04
GTF2A1-203ENST00000553612 JUNP05412 331 aaKnown RBP8.59□□□□□ -1.04
GTF2A1-203ENST00000553612 CD1EP15812 388 aa8.59□□□□□ -1.04
GTF2A1-203ENST00000553612 ZNF84P51523 738 aa8.59□□□□□ -1.04
GTF2A1-203ENST00000553612 RBP5P82980 135 aa8.59□□□□□ -1.04
GTF2A1-203ENST00000553612 EXOSC6Q5RKV6 272 aaKnown RBP8.59□□□□□ -1.04
GTF2A1-203ENST00000553612 HIST2H3PS2Q5TEC6 136 aa8.59□□□□□ -1.04
GTF2A1-203ENST00000553612 TBPL2Q6SJ96 375 aa8.59□□□□□ -1.04
GTF2A1-203ENST00000553612 ROPN1LQ96C74 230 aa8.59□□□□□ -1.04
GTF2A1-203ENST00000553612 DNAJC19Q96DA6 116 aa8.59□□□□□ -1.04
GTF2A1-203ENST00000553612 ECHDC3Q96DC8 303 aa8.59□□□□□ -1.04
GTF2A1-203ENST00000553612 DDA1Q9BW61 102 aa8.59□□□□□ -1.04
GTF2A1-203ENST00000553612 CISHQ9NSE2 258 aa8.59□□□□□ -1.04
GTF2A1-203ENST00000553612 FOXJ2Q9P0K8 574 aa8.59□□□□□ -1.04
GTF2A1-203ENST00000553612 NOP16Q9Y3C1 178 aaKnown RBP8.59□□□□□ -1.04
GTF2A1-203ENST00000553612 MYH9P35579 1960 aaKnown RBP8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 CXCR6O00574 342 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 AZIN1O14977 448 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 KHNYNO15037 678 aaKnown RBP8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 MBTPS2O43462 519 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 CREBL2O60519 120 aaPredicted RBP8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 APBB3O95704 486 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 CD3GP09693 182 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 HCCSP53701 268 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 TRA2AQ13595 282 aaKnown RBP eCLIP8.58□□□□□ -1.046e-7■□□□□ 9.2
GTF2A1-203ENST00000553612 DUOXA2Q1HG44 320 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 ANKRD39Q53RE8 183 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 SLC51AQ86UW1 340 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 ARMC10Q8N2F6 343 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 ADPRHL1Q8NDY3 354 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 FAM216AQ8WUB2 273 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 HHIPL1Q96JK4 782 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 ZBTB45Q96K62 511 aaPredicted RBP8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 KREMEN1Q96MU8 473 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 CPPED1Q9BRF8 314 aaPredicted RBP8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 USP22Q9UPT9 525 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 CRB1P82279 1406 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 CNTN5O94779 1100 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 FABP3P05413 133 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 UBBP0CG47 229 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 GABRB3P28472 473 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 ZNF763Q0D2J5 394 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 GALNT2Q10471 571 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 C10orf120Q5SQS8 335 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 OR2T2Q6IF00 324 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 CXXC5Q7LFL8 322 aaKnown RBP8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 OR4E2Q8NGC2 313 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 SVIPQ8NHG7 77 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 MAGEB5Q9BZ81 275 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 NCDNQ9UBB6 729 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 A2ML1A8K2U0 1454 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 ELOVL7A1L3X0 281 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 BBIP1A8MTZ0 92 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 ACOT7O00154 380 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 MAFKO60675 156 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 SLC43A1O75387 559 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 LIPCP11150 499 aa8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 JUNBP17275 347 aaPredicted RBP8.58□□□□□ -1.04
GTF2A1-203ENST00000553612 CTSCP53634 463 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms