RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	RNF4	P78317	190 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	BST1	Q10588	318 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	LTB4R	Q15722	352 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	SP5	Q6BEB4	398 aa	Predicted RBP	11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	XKRX	Q6PP77	449 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	IL20RB	Q6UXL0	311 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	TRIM42	Q8IWZ5	723 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	HOMEZ	Q8IX15	550 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	CCDC116	Q8IYX3	515 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	GHDC	Q8N2G8	530 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	VWA5B2	Q8N398	1253 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	FNDC5	Q8NAU1	212 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	PHF10	Q8WUB8	498 aa	Known RBP	11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	ATP6V1G3	Q96LB4	118 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	PPP3R2	Q96LZ3	170 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	MARCO	Q9UEW3	520 aa	Predicted RBP	11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	TINAG	Q9UJW2	476 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	NPIPA1	Q9UND3	350 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	KLF13	Q9Y2Y9	288 aa	Predicted RBP	11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	RAP2C	Q9Y3L5	183 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	TMEM200C	A6NKL6	621 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	ENO4	A6NNW6	628 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	LSM1	O15116	133 aa	Known RBP	11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	FGF4	P08620	206 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	CT62	P0C5K7	136 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	KIT	P10721	976 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	DDC	P20711	480 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	PTGER4	P35408	488 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	NCBP2	P52298	156 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	WDR4	P57081	412 aa	Known RBP	11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	EXOSC7	Q15024	291 aa	Known RBP	11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	NNAT	Q16517	81 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	SPRED3	Q2MJR0	410 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	TTMP	Q5BVD1	217 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	CES4A	Q5XG92	561 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	ATG16L1	Q676U5	607 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	ANKRD26P1	Q6NSI1	321 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	GALNT18	Q6P9A2	607 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	FAM111B	Q6SJ93	734 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507		Q6ZSR9	355 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	SZRD1	Q7Z422	152 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	FGD2	Q7Z6J4	655 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	C9orf40	Q8IXQ3	194 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	GPALPP1	Q8IXQ4	340 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	FAM9C	Q8IZT9	166 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	CPSF7	Q8N684	471 aa	Known RBP	11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	ZFP62	Q8NB50	900 aa	Predicted RBP	11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	OR9A2	Q8NGT5	310 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	C16orf52	Q8NHV5	167 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	FAM76A	Q8TAV0	307 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	SLC22A8	Q8TCC7	542 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	CXorf21	Q9HAI6	301 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	MYNN	Q9NPC7	610 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	CHST11	Q9NPF2	352 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	SLC35C2	Q9NQQ7	365 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	PLSCR2	Q9NRY7	297 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	SH3BP4	Q9P0V3	963 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	MYOT	Q9UBF9	498 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	BAIAP2L1	Q9UHR4	511 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	YARS2	Q9Y2Z4	477 aa	Known RBP	11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	MEMO1	Q9Y316	297 aa		11.75	□□□□□ -0.53
FDPS-204	ENST00000461507	ZNF407	Q9C0G0	2248 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	UQCRHL	A0A096LP55	91 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	C2orf92	A0A1B0GVN3	265 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	ADAM10	O14672	748 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	OR6B1	O95007	311 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	JUN	P05412	331 aa	Known RBP	11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	SDC1	P18827	310 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	TACR1	P25103	407 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	GPC1	P35052	558 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	HPCAL1	P37235	193 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	SOX3	P41225	446 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	MEOX1	P50221	254 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	RPL14	P50914	215 aa	Known RBP	11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	SMS	P52788	366 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	MRPS35	P82673	323 aa	Known RBP	11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	DUSP2	Q05923	314 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	RFTN2	Q52LD8	501 aa	Predicted RBP	11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	IKBIP	Q70UQ0	350 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	SAMD14	Q8IZD0	417 aa	Predicted RBP	11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	LIX1	Q8N485	282 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	ACBD4	Q8NC06	268 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	OR5M3	Q8NGP4	307 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	KAT2A	Q92830	837 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	PPCDC	Q96CD2	204 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	CNRIP1	Q96F85	164 aa	Predicted RBP	11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	EGLN2	Q96KS0	407 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	C3orf30	Q96M34	536 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	RASL10B	Q96S79	203 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	DMRTA2	Q96SC8	542 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	CCT7	Q99832	543 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	NUF2	Q9BZD4	464 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	WWTR1	Q9GZV5	400 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	OR10A5	Q9H207	317 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	RUBCNL	Q9H714	662 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	MANSC1	Q9H8J5	431 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	SH3BGRL2	Q9UJC5	107 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	CES1P1	Q9UKY3	287 aa		11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms