RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	FAM98A	Q8NCA5	519 aa	Known RBP	11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	C16orf78	Q8WTQ4	265 aa		11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	GFM2	Q969S9	779 aa	Known RBP	11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	LRFN1	Q9P244	771 aa		11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	ERVK-11	Q9UQG0	969 aa		11.79	□□□□□ -0.52
FDPS-204	ENST00000461507	APC	P25054	2843 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	ATP6AP2	A0A1C7CYW4	349 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	TMEM114	B3SHH9	223 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	PRSS44	E7EML9	344 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	CCL21	O00585	134 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	ITM2A	O43736	263 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	ITGA10	O75578	1167 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	ATP6AP2	O75787	350 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	SLC35E2	P0CK97	266 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	CPM	P14384	443 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	POR	P16435	677 aa	Predicted RBP	11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	SLC1A6	P48664	564 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	CYB561	P49447	251 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	ALDH6A1	Q02252	535 aa	Known RBP	11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	SRSF11	Q05519	484 aa	Known RBP	11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	BIK	Q13323	160 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	MPP2	Q14168	576 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	C3AR1	Q16581	482 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	AGBL2	Q5U5Z8	902 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	HLA-DQA1	Q5Y7H0	255 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	NOXRED1	Q6NXP6	359 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	C16orf47	Q6ZP98	133 aa	Predicted RBP	11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	DGAT2L6	Q6ZPD8	337 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	SLC29A4	Q7RTT9	530 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	TRIM46	Q7Z4K8	759 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	POGLUT1	Q8NBL1	392 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	OR5L2	Q8NGL0	311 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	CLHC1	Q8NHS4	586 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	ASB15	Q8WXK1	588 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	MARVELD3	Q96A59	401 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	TMEM125	Q96AQ2	219 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	ARL8A	Q96BM9	186 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	SENP5	Q96HI0	755 aa	Predicted RBP	11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	C1orf109	Q9NX04	203 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	BCAP29	Q9UHQ4	241 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	ZDHHC2	Q9UIJ5	367 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	ZNF223	Q9UK11	482 aa	Predicted RBP	11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	DNAJC15	Q9Y5T4	150 aa		11.78	□□□□□ -0.52
FDPS-204	ENST00000461507	SERTM1	A2A2V5	107 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507		A8MVJ9	347 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	HRK	O00198	91 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	AKAP10	O43572	662 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	PRKN	O60260	465 aa	Predicted RBP	11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	PEX11A	O75192	247 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	OR2J2	O76002	312 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	LRAT	O95237	230 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	ZNF24	P17028	368 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	CSNK2A2	P19784	350 aa	Predicted RBP	11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	GRK2	P25098	689 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	SSR4	P51571	173 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	CASP6	P55212	293 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	IGLV3-21	P80748	117 aa	Predicted RBP	11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	ADORA2A-AS1	P86434	159 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	MAPKAPK3	Q16644	382 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	ZNF630	Q2M218	657 aa	Predicted RBP	11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	ATP6AP1L	Q52LC2	224 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	TNFAIP8L3	Q5GJ75	292 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	RNFT1	Q5M7Z0	435 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	MRGPRG	Q86SM5	289 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	SPPL2C	Q8IUH8	684 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	CYP4Z2P	Q8N1L4	340 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	LRRC25	Q8N386	305 aa	Predicted RBP	11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	ZNF781	Q8N8C0	355 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	ADCY4	Q8NFM4	1077 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	OR2T11	Q8NH01	316 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	ZNF721	Q8TF20	911 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	DYDC1	Q8WWB3	177 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	TLCD1	Q96CP7	247 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	TUBGCP3	Q96CW5	907 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	FBXL20	Q96IG2	436 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	MAGED4	Q96JG8	741 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	TSSK3	Q96PN8	268 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	BBS4	Q96RK4	519 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	C1orf50	Q9BV19	199 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	ACBD3	Q9H3P7	528 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	TUBB1	Q9H4B7	451 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	HPF1	Q9NWY4	346 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	HEY2	Q9UBP5	337 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	GIMAP2	Q9UG22	337 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	CSMD1	Q96PZ7	3565 aa		11.77	□□□□□ -0.53
FDPS-204	ENST00000461507	NPIPA5	E9PKD4	350 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	ASNA1	O43681	348 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	DHRS4L1	P0CG22	281 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	PRF1	P14222	555 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	DRD2	P14416	443 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	H2AFX	P16104	143 aa	Predicted RBP	11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	MAPK1	P28482	360 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	GRN	P28799	593 aa	Known RBP	11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	NTS	P30990	170 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	SSTR4	P31391	388 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	ARRB2	P32121	409 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	GSTM5	P46439	218 aa		11.76	□□□□□ -0.53
FDPS-204	ENST00000461507	HK2	P52789	917 aa		11.76	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms