RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TAGLNQ01995 201 aaKnown RBP16.84■□□□□ 0.29
NUP54-205ENST00000507257 ADAM15Q13444 863 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 IL18Q14116 193 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 FAM214AQ32MH5 1076 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 RTP2Q5QGT7 225 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 SERPINA13PQ6UXR4 307 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 GLCCI1Q86VQ1 547 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 ARIH2OSQ8N7S6 290 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 SYT14Q8NB59 555 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 NLGN2Q8NFZ4 835 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 OR4M2Q8NGB6 313 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 WFDC5Q8TCV5 224 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 NEURL3Q96EH8 262 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 ZNF354BQ96LW1 612 aa16.84■□□□□ 0.29
NUP54-205ENST00000507257 DOCK6Q96HP0 2047 aa16.83■□□□□ 0.28
NUP54-205ENST00000507257 A0A1W2PRQ8 180 aa16.83■□□□□ 0.28
NUP54-205ENST00000507257 CATP04040 527 aaKnown RBP16.83■□□□□ 0.28
NUP54-205ENST00000507257 PDGFAP04085 211 aa16.83■□□□□ 0.28
NUP54-205ENST00000507257 RB1P06400 928 aa16.83■□□□□ 0.28
NUP54-205ENST00000507257 IMPA1P29218 277 aa16.83■□□□□ 0.28
NUP54-205ENST00000507257 KCNJ5P48544 419 aa16.83■□□□□ 0.28
NUP54-205ENST00000507257 ATP12AP54707 1039 aa16.83■□□□□ 0.28
NUP54-205ENST00000507257 MINDY4Q4G0A6 757 aa16.83■□□□□ 0.28
NUP54-205ENST00000507257 TEX261Q6UWH6 196 aa16.83■□□□□ 0.28
NUP54-205ENST00000507257 APCDD1Q8J025 514 aa16.83■□□□□ 0.28
NUP54-205ENST00000507257 C2orf69Q8N8R5 385 aa16.83■□□□□ 0.28
NUP54-205ENST00000507257 UCN3Q969E3 161 aa16.83■□□□□ 0.28
NUP54-205ENST00000507257 PPP1R16AQ96I34 528 aa16.83■□□□□ 0.28
NUP54-205ENST00000507257 LRR1Q96L50 414 aa16.83■□□□□ 0.28
NUP54-205ENST00000507257 PRR14Q9BWN1 585 aa16.83■□□□□ 0.28
NUP54-205ENST00000507257 GALNT9Q9HCQ5 603 aa16.83■□□□□ 0.28
NUP54-205ENST00000507257 SEMA3GQ9NS98 782 aa16.83■□□□□ 0.28
NUP54-205ENST00000507257 YARS2Q9Y2Z4 477 aaKnown RBP16.83■□□□□ 0.28
NUP54-205ENST00000507257 U3KQ87 197 aa16.83■□□□□ 0.28
NUP54-205ENST00000507257 A8MX80 341 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 C5orf58C9J3I9 102 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 PLOD3O60568 738 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 KLHL18O94889 574 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 OPRD1P41143 372 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 BDKRB1P46663 353 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 GIPRP48546 466 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 INPP1P49441 399 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 DGKEP52429 567 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 RGS1Q08116 209 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 COL28A1Q2UY09 1125 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 ENTPD8Q5MY95 495 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 ANKRD54Q6NXT1 300 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 OTOP2Q7RTS6 562 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 BCDIN3DQ7Z5W3 292 aaKnown RBP16.82■□□□□ 0.28
NUP54-205ENST00000507257 FBXL6Q8N531 539 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 OR5AK3PQ8NH89 298 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 SLC7A13Q8TCU3 470 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 SLC38A5Q8WUX1 472 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 EFCAB11Q9BUY7 163 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 SLC28A3Q9HAS3 691 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 DMRT3Q9NQL9 472 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 TMEM161AQ9NX61 479 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 MAT2BQ9NZL9 334 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 STON1Q9Y6Q2 735 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 NPC1O15118 1278 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 BET1O15155 118 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 CHP2O43745 196 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 TBX19O60806 448 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 HLA-DPB1P04440 258 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 TPOP07202 933 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 NAT1P18440 290 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 SOAT1P35610 550 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 SMSP52788 366 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 SNRPD1P62314 119 aaKnown RBP16.82■□□□□ 0.28
NUP54-205ENST00000507257 MC1RQ01726 317 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 HSD17B12Q53GQ0 312 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 PLA1AQ53H76 456 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 HACD4Q5VWC8 232 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 SLC8B1Q6J4K2 584 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 SLC36A4Q6YBV0 504 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 FBXO15Q8NCQ5 510 aaPredicted RBP16.82■□□□□ 0.28
NUP54-205ENST00000507257 OR8H1Q8NGG4 311 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 MED8Q96G25 268 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 TRMT2BQ96GJ1 504 aaKnown RBP16.82■□□□□ 0.28
NUP54-205ENST00000507257 SPNS1Q9H2V7 528 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 ASB6Q9NWX5 421 aa16.82■□□□□ 0.28
NUP54-205ENST00000507257 LOC102723532A0A0G2JNH3 316 aa16.81■□□□□ 0.28
NUP54-205ENST00000507257 ISM1B1AKI9 464 aa16.81■□□□□ 0.28
NUP54-205ENST00000507257 GSTM3P21266 225 aa16.81■□□□□ 0.28
NUP54-205ENST00000507257 ATN1P54259 1190 aaPredicted RBP16.81■□□□□ 0.28
NUP54-205ENST00000507257 UBE3AQ05086 875 aa16.81■□□□□ 0.28
NUP54-205ENST00000507257 GINS1Q14691 196 aa16.81■□□□□ 0.28
NUP54-205ENST00000507257 Q6ZNB5 142 aa16.81■□□□□ 0.28
NUP54-205ENST00000507257 ZNF680Q8NEM1 530 aa16.81■□□□□ 0.28
NUP54-205ENST00000507257 LRRC20Q8TCA0 184 aa16.81■□□□□ 0.28
NUP54-205ENST00000507257 TIFAQ96CG3 184 aa16.81■□□□□ 0.28
NUP54-205ENST00000507257 RNFT2Q96EX2 444 aa16.81■□□□□ 0.28
NUP54-205ENST00000507257 SENP5Q96HI0 755 aaPredicted RBP16.81■□□□□ 0.28
NUP54-205ENST00000507257 NECTIN4Q96NY8 510 aa16.81■□□□□ 0.28
NUP54-205ENST00000507257 TM9SF2Q99805 663 aa16.81■□□□□ 0.28
NUP54-205ENST00000507257 SUV39H2Q9H5I1 410 aa16.81■□□□□ 0.28
NUP54-205ENST00000507257 CBLCQ9ULV8 474 aa16.81■□□□□ 0.28
NUP54-205ENST00000507257 NCKAP1Q9Y2A7 1128 aa16.81■□□□□ 0.28
NUP54-205ENST00000507257 KDM4EB2RXH2 506 aaPredicted RBP16.8■□□□□ 0.28
NUP54-205ENST00000507257 CDK2AP1O14519 115 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms