RNA–Protein interactions for RNA: YPR134W

MSS18, Transcript of Nuclear encoded protein needed for splicing of mitochondrial intron, yeast

Gene MSS18, Length 807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSS18	YPR134W	URM1	P40554	99 aa	Predicted RBP	4.17	□□□□□ -1.74
MSS18	YPR134W	SVF1	Q05515	481 aa		4.17	□□□□□ -1.74
MSS18	YPR134W	HRQ1	Q05549	1077 aa		4.17	□□□□□ -1.74
MSS18	YPR134W	SRP101	P32916	621 aa		4.16	□□□□□ -1.74
MSS18	YPR134W	GIC1	P38785	314 aa		4.16	□□□□□ -1.74
MSS18	YPR134W	CHS7	P38843	316 aa		4.16	□□□□□ -1.74
MSS18	YPR134W	SLI1	P53304	468 aa		4.16	□□□□□ -1.74
MSS18	YPR134W	KCS1	Q12494	1050 aa		4.16	□□□□□ -1.74
MSS18	YPR134W	RAD53	P22216	821 aa		4.15	□□□□□ -1.75
MSS18	YPR134W	AGP1	P25376	633 aa		4.15	□□□□□ -1.75
MSS18	YPR134W	HRR25	P29295	494 aa	Known RBP	4.15	□□□□□ -1.75
MSS18	YPR134W	YKL151C	P36059	337 aa		4.15	□□□□□ -1.75
MSS18	YPR134W	YKR078W	P36158	585 aa	Known RBP	4.15	□□□□□ -1.75
MSS18	YPR134W	KIN4	Q01919	800 aa		4.15	□□□□□ -1.75
MSS18	YPR134W	GDE1	Q02979	1223 aa		4.15	□□□□□ -1.75
MSS18	YPR134W	NPC2	Q12408	173 aa		4.15	□□□□□ -1.75
MSS18	YPR134W	CDC12	P32468	407 aa	Known RBP	4.14	□□□□□ -1.75
MSS18	YPR134W	MAD1	P40957	749 aa		4.14	□□□□□ -1.75
MSS18	YPR134W	NCS6	P53088	359 aa		4.14	□□□□□ -1.75
MSS18	YPR134W	TPO2	P53283	614 aa		4.14	□□□□□ -1.75
MSS18	YPR134W	FAL1	Q12099	399 aa	Known RBP	4.14	□□□□□ -1.75
MSS18	YPR134W	OAR1	P35731	278 aa		4.13	□□□□□ -1.75
MSS18	YPR134W	FAA4	P47912	694 aa	Known RBP	4.13	□□□□□ -1.75
MSS18	YPR134W	GYP7	P48365	746 aa		4.13	□□□□□ -1.75
MSS18	YPR134W	CWC24	P53769	259 aa		4.13	□□□□□ -1.75
MSS18	YPR134W	SHE9	Q04172	456 aa		4.13	□□□□□ -1.75
MSS18	YPR134W	YPR196W	Q06595	470 aa		4.13	□□□□□ -1.75
MSS18	YPR134W	ABD1	P32783	436 aa	Predicted RBP	4.12	□□□□□ -1.75
MSS18	YPR134W	YER158C	P40095	573 aa		4.12	□□□□□ -1.75
MSS18	YPR134W	DUS3	Q06053	668 aa	Known RBP	4.12	□□□□□ -1.75
MSS18	YPR134W	PIN2	Q12057	282 aa		4.12	□□□□□ -1.75
MSS18	YPR134W	CDC48	P25694	835 aa	Known RBP	4.11	□□□□□ -1.75
MSS18	YPR134W	EFT1	P32324	842 aa	Known RBP	4.11	□□□□□ -1.75
MSS18	YPR134W	KTR4	P38131	464 aa		4.11	□□□□□ -1.75
MSS18	YPR134W	UBA2	P52488	636 aa		4.11	□□□□□ -1.75
MSS18	YPR134W	RAI1	P53063	387 aa	Known RBP	4.11	□□□□□ -1.75
MSS18	YPR134W	VPS30	Q02948	557 aa		4.11	□□□□□ -1.75
MSS18	YPR134W	PPM2	Q08282	695 aa		4.11	□□□□□ -1.75
MSS18	YPR134W	ADE8	P04161	214 aa		4.1	□□□□□ -1.75
MSS18	YPR134W	SED4	P25365	1065 aa		4.1	□□□□□ -1.75
MSS18	YPR134W	KAR4	P25583	335 aa		4.1	□□□□□ -1.75
MSS18	YPR134W	PPH3	P32345	308 aa		4.1	□□□□□ -1.75
MSS18	YPR134W	MOH1	P38191	138 aa		4.1	□□□□□ -1.75
MSS18	YPR134W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
MSS18	YPR134W	CAD1	P24813	409 aa	Known RBP	4.09	□□□□□ -1.75
MSS18	YPR134W	MRP8	P35719	219 aa		4.09	□□□□□ -1.75
MSS18	YPR134W	TIM44	Q01852	431 aa		4.09	□□□□□ -1.75
MSS18	YPR134W	VPS16	Q03308	798 aa		4.09	□□□□□ -1.75
MSS18	YPR134W	ESC2	Q06340	456 aa		4.09	□□□□□ -1.75
MSS18	YPR134W	TRP4	P07285	380 aa	Predicted RBP	4.08	□□□□□ -1.76
MSS18	YPR134W	YPT53	P36019	220 aa		4.08	□□□□□ -1.76
MSS18	YPR134W	VBA5	P36172	582 aa		4.08	□□□□□ -1.76
MSS18	YPR134W	YBR238C	P38330	731 aa	Known RBP	4.08	□□□□□ -1.76
MSS18	YPR134W	MBP1	P39678	833 aa		4.08	□□□□□ -1.76
MSS18	YPR134W	SFB2	P53953	876 aa		4.08	□□□□□ -1.76
MSS18	YPR134W	UPC2	Q12151	913 aa		4.08	□□□□□ -1.76
MSS18	YPR134W	PBY1	P38254	753 aa		4.07	□□□□□ -1.76
MSS18	YPR134W	SUL1	P38359	859 aa		4.07	□□□□□ -1.76
MSS18	YPR134W	TSL1	P38427	1098 aa	Known RBP	4.07	□□□□□ -1.76
MSS18	YPR134W	SIT1	P39980	628 aa		4.07	□□□□□ -1.76
MSS18	YPR134W	YDR306C	Q06640	478 aa		4.07	□□□□□ -1.76
MSS18	YPR134W	OMS1	Q06668	471 aa		4.07	□□□□□ -1.76
MSS18	YPR134W	OPI10	Q08202	246 aa		4.07	□□□□□ -1.76
MSS18	YPR134W	YOL073C	Q08232	322 aa		4.07	□□□□□ -1.76
MSS18	YPR134W	NOT3	P06102	836 aa	Known RBP	4.06	□□□□□ -1.76
MSS18	YPR134W	PRP9	P19736	530 aa	Known RBP	4.06	□□□□□ -1.76
MSS18	YPR134W	AAR2	P32357	355 aa	Predicted RBP	4.06	□□□□□ -1.76
MSS18	YPR134W	NPP2	P39997	493 aa		4.06	□□□□□ -1.76
MSS18	YPR134W	IRR1	P40541	1150 aa		4.06	□□□□□ -1.76
MSS18	YPR134W	STU2	P46675	888 aa		4.06	□□□□□ -1.76
MSS18	YPR134W	CCM1	P48237	864 aa	Predicted RBP	4.06	□□□□□ -1.76
MSS18	YPR134W	RNT1	Q02555	471 aa		4.06	□□□□□ -1.76
MSS18	YPR134W	WHI4	Q07655	649 aa	Known RBP	4.06	□□□□□ -1.76
MSS18	YPR134W	ACF2	Q12168	779 aa		4.06	□□□□□ -1.76
MSS18	YPR134W	ERG4	P25340	473 aa		4.05	□□□□□ -1.76
MSS18	YPR134W	YKE2	P52553	114 aa		4.05	□□□□□ -1.76
MSS18	YPR134W	YLR040C	Q07988	224 aa		4.05	□□□□□ -1.76
MSS18	YPR134W	MCH5	Q08777	521 aa		4.05	□□□□□ -1.76
MSS18	YPR134W	LAS17	Q12446	633 aa		4.05	□□□□□ -1.76
MSS18	YPR134W	STE13	P33894	931 aa		4.04	□□□□□ -1.76
MSS18	YPR134W	JIP5	Q06214	492 aa	Predicted RBP	4.04	□□□□□ -1.76
MSS18	YPR134W	RFA1	P22336	621 aa	Known RBP	4.03	□□□□□ -1.76
MSS18	YPR134W	CDC11	P32458	415 aa		4.03	□□□□□ -1.76
MSS18	YPR134W	STE14	P32584	239 aa		4.03	□□□□□ -1.76
MSS18	YPR134W	YRO2	P38079	344 aa		4.03	□□□□□ -1.76
MSS18	YPR134W	BUL1	P48524	976 aa		4.03	□□□□□ -1.76
MSS18	YPR134W	TYE7	P33122	291 aa	Predicted RBP	4.02	□□□□□ -1.77
MSS18	YPR134W	SDP1	P40479	209 aa		4.02	□□□□□ -1.77
MSS18	YPR134W	LCD1	Q04377	747 aa		4.02	□□□□□ -1.77
MSS18	YPR134W	PEX19	Q07418	342 aa		4.02	□□□□□ -1.77
MSS18	YPR134W	SWM1	Q12379	170 aa		4.02	□□□□□ -1.77
MSS18	YPR134W	PPR1	P07272	904 aa	Predicted RBP	4.01	□□□□□ -1.77
MSS18	YPR134W	MET3	P08536	511 aa		4.01	□□□□□ -1.77
MSS18	YPR134W	FBP1	P09201	348 aa		4.01	□□□□□ -1.77
MSS18	YPR134W	DAS1	P47005	663 aa		4.01	□□□□□ -1.77
MSS18	YPR134W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
MSS18	YPR134W	SNU71	P53207	620 aa	Known RBP	4.01	□□□□□ -1.77
MSS18	YPR134W	TRM11	Q12463	433 aa		4.01	□□□□□ -1.77
MSS18	YPR134W	PRI2	P20457	528 aa		4	□□□□□ -1.77
MSS18	YPR134W	NPP1	P25353	742 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms