RNA–Protein interactions for RNA: YPR129W

SCD6, Transcript of Repressor of translation initiation, yeast

Gene SCD6, Length 1,050 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCD6	YPR129W	INO1	P11986	533 aa		4.98	□□□□□ -1.61
SCD6	YPR129W	FUN30	P31380	1131 aa		4.98	□□□□□ -1.61
SCD6	YPR129W	FYV10	P40492	516 aa		4.98	□□□□□ -1.61
SCD6	YPR129W	POL32	P47110	350 aa		4.98	□□□□□ -1.61
SCD6	YPR129W	HRQ1	Q05549	1077 aa		4.98	□□□□□ -1.61
SCD6	YPR129W	GIC1	P38785	314 aa		4.97	□□□□□ -1.61
SCD6	YPR129W	NOP2	P40991	618 aa	Known RBP	4.97	□□□□□ -1.61
SCD6	YPR129W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
SCD6	YPR129W	ERG4	P25340	473 aa		4.96	□□□□□ -1.62
SCD6	YPR129W	YKL107W	P34251	309 aa		4.96	□□□□□ -1.62
SCD6	YPR129W	MOT2	P34909	587 aa	Known RBP	4.96	□□□□□ -1.62
SCD6	YPR129W	STB4	P50104	949 aa		4.96	□□□□□ -1.62
SCD6	YPR129W	WHI4	Q07655	649 aa	Known RBP	4.96	□□□□□ -1.62
SCD6	YPR129W	IRC10	Q08118	586 aa		4.96	□□□□□ -1.62
SCD6	YPR129W	ACF2	Q12168	779 aa		4.96	□□□□□ -1.62
SCD6	YPR129W	CAD1	P24813	409 aa	Known RBP	4.95	□□□□□ -1.62
SCD6	YPR129W	DUT1	P33317	147 aa		4.95	□□□□□ -1.62
SCD6	YPR129W	YGL176C	P46945	554 aa		4.95	□□□□□ -1.62
SCD6	YPR129W	TYW3	P53177	273 aa		4.95	□□□□□ -1.62
SCD6	YPR129W	TIM44	Q01852	431 aa		4.95	□□□□□ -1.62
SCD6	YPR129W	TRP4	P07285	380 aa	Predicted RBP	4.94	□□□□□ -1.62
SCD6	YPR129W	ATE1	P16639	503 aa		4.94	□□□□□ -1.62
SCD6	YPR129W	SNM1	P40993	198 aa		4.94	□□□□□ -1.62
SCD6	YPR129W	YFR016C	P43597	1233 aa	Known RBP	4.94	□□□□□ -1.62
SCD6	YPR129W	EEB1	Q02891	456 aa		4.94	□□□□□ -1.62
SCD6	YPR129W	RMD1	Q03441	430 aa		4.94	□□□□□ -1.62
SCD6	YPR129W	CUE2	P36075	443 aa	Known RBP	4.93	□□□□□ -1.62
SCD6	YPR129W	LGE1	Q02796	332 aa	Known RBP	4.93	□□□□□ -1.62
SCD6	YPR129W	NAP1	P25293	417 aa	Known RBP	4.92	□□□□□ -1.62
SCD6	YPR129W	RPC82	P32349	654 aa		4.92	□□□□□ -1.62
SCD6	YPR129W	SNF7	P39929	240 aa	Known RBP	4.92	□□□□□ -1.62
SCD6	YPR129W	RNT1	Q02555	471 aa		4.92	□□□□□ -1.62
SCD6	YPR129W	UPC2	Q12151	913 aa		4.92	□□□□□ -1.62
SCD6	YPR129W	RPS0B	P46654	252 aa	Known RBP	4.91	□□□□□ -1.62
SCD6	YPR129W	YMR206W	Q03695	313 aa		4.91	□□□□□ -1.62
SCD6	YPR129W	CDC34	P14682	295 aa		4.9	□□□□□ -1.63
SCD6	YPR129W	SAH1	P39954	449 aa	Known RBP	4.9	□□□□□ -1.63
SCD6	YPR129W	RRP15	Q06511	250 aa	Predicted RBP	4.9	□□□□□ -1.63
SCD6	YPR129W	PPR1	P07272	904 aa	Predicted RBP	4.89	□□□□□ -1.63
SCD6	YPR129W	MTH1	P35198	433 aa		4.89	□□□□□ -1.63
SCD6	YPR129W	MET10	P39692	1035 aa		4.89	□□□□□ -1.63
SCD6	YPR129W	NPP2	P39997	493 aa		4.89	□□□□□ -1.63
SCD6	YPR129W	SPO20	Q04359	397 aa		4.89	□□□□□ -1.63
SCD6	YPR129W	SED4	P25365	1065 aa		4.88	□□□□□ -1.63
SCD6	YPR129W	STE14	P32584	239 aa		4.88	□□□□□ -1.63
SCD6	YPR129W	SFB2	P53953	876 aa		4.88	□□□□□ -1.63
SCD6	YPR129W	MUK1	Q02866	612 aa		4.88	□□□□□ -1.63
SCD6	YPR129W	YLR225C	Q05948	407 aa	Known RBP	4.88	□□□□□ -1.63
SCD6	YPR129W	AIM44	Q99299	758 aa		4.88	□□□□□ -1.63
SCD6	YPR129W	ALG7	P07286	448 aa		4.87	□□□□□ -1.63
SCD6	YPR129W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
SCD6	YPR129W	SRP1	Q02821	542 aa	Known RBP	4.87	□□□□□ -1.63
SCD6	YPR129W	CDC12	P32468	407 aa	Known RBP	4.86	□□□□□ -1.63
SCD6	YPR129W	PET112	P33893	541 aa		4.86	□□□□□ -1.63
SCD6	YPR129W	GND2	P53319	492 aa		4.86	□□□□□ -1.63
SCD6	YPR129W	SPC42	P36094	363 aa		4.85	□□□□□ -1.63
SCD6	YPR129W	RAI1	P53063	387 aa	Known RBP	4.85	□□□□□ -1.63
SCD6	YPR129W	SLU7	Q02775	382 aa	Known RBP	4.85	□□□□□ -1.63
SCD6	YPR129W	NDJ1	Q12366	352 aa		4.85	□□□□□ -1.63
SCD6	YPR129W	TRM13	Q12383	476 aa		4.85	□□□□□ -1.63
SCD6	YPR129W	KRI1	P42846	591 aa	Known RBP	4.84	□□□□□ -1.63
SCD6	YPR129W	GYP7	P48365	746 aa		4.84	□□□□□ -1.63
SCD6	YPR129W	ERG5	P54781	538 aa		4.84	□□□□□ -1.63
SCD6	YPR129W	MNN4	P36044	1178 aa		4.83	□□□□□ -1.64
SCD6	YPR129W	YPR196W	Q06595	470 aa		4.83	□□□□□ -1.64
SCD6	YPR129W	HBT1	Q07653	1046 aa	Known RBP	4.83	□□□□□ -1.64
SCD6	YPR129W	YKR078W	P36158	585 aa	Known RBP	4.82	□□□□□ -1.64
SCD6	YPR129W	YER158C	P40095	573 aa		4.82	□□□□□ -1.64
SCD6	YPR129W	SDS3	P40505	327 aa		4.82	□□□□□ -1.64
SCD6	YPR129W	MNR2	P35724	969 aa		4.81	□□□□□ -1.64
SCD6	YPR129W	ESC2	Q06340	456 aa		4.81	□□□□□ -1.64
SCD6	YPR129W	YGR053C	P53234	283 aa		4.8	□□□□□ -1.64
SCD6	YPR129W	IOC4	Q04213	475 aa		4.8	□□□□□ -1.64
SCD6	YPR129W	PEX19	Q07418	342 aa		4.8	□□□□□ -1.64
SCD6	YPR129W	SEC21	P32074	935 aa	Known RBP	4.79	□□□□□ -1.64
SCD6	YPR129W	DAS1	P47005	663 aa		4.79	□□□□□ -1.64
SCD6	YPR129W	DUS3	Q06053	668 aa	Known RBP	4.79	□□□□□ -1.64
SCD6	YPR129W	FRE5	Q08908	694 aa		4.79	□□□□□ -1.64
SCD6	YPR129W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
SCD6	YPR129W	ABD1	P32783	436 aa	Predicted RBP	4.78	□□□□□ -1.64
SCD6	YPR129W	CTF13	P35203	478 aa		4.78	□□□□□ -1.64
SCD6	YPR129W	TSL1	P38427	1098 aa	Known RBP	4.78	□□□□□ -1.64
SCD6	YPR129W	YHL017W	P38745	532 aa		4.78	□□□□□ -1.64
SCD6	YPR129W	NOT3	P06102	836 aa	Known RBP	4.77	□□□□□ -1.65
SCD6	YPR129W	MET3	P08536	511 aa		4.77	□□□□□ -1.65
SCD6	YPR129W	FBP1	P09201	348 aa		4.77	□□□□□ -1.65
SCD6	YPR129W	CDC48	P25694	835 aa	Known RBP	4.77	□□□□□ -1.65
SCD6	YPR129W	PPS1	P38148	807 aa		4.77	□□□□□ -1.65
SCD6	YPR129W	YBR238C	P38330	731 aa	Known RBP	4.77	□□□□□ -1.65
SCD6	YPR129W	YKE2	P52553	114 aa		4.77	□□□□□ -1.65
SCD6	YPR129W	OYE2	Q03558	400 aa	Known RBP	4.77	□□□□□ -1.65
SCD6	YPR129W	MRH1	Q12117	320 aa	Predicted RBP	4.77	□□□□□ -1.65
SCD6	YPR129W	HEM3	P28789	327 aa		4.76	□□□□□ -1.65
SCD6	YPR129W	ASF1	P32447	279 aa		4.76	□□□□□ -1.65
SCD6	YPR129W	STE13	P33894	931 aa		4.76	□□□□□ -1.65
SCD6	YPR129W	MBP1	P39678	833 aa		4.76	□□□□□ -1.65
SCD6	YPR129W	ELO3	P40319	345 aa		4.76	□□□□□ -1.65
SCD6	YPR129W	SDP1	P40479	209 aa		4.76	□□□□□ -1.65
SCD6	YPR129W	DLT1	Q04216	342 aa		4.76	□□□□□ -1.65
SCD6	YPR129W	SSL1	Q04673	461 aa	Predicted RBP	4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 135.4 ms