RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C SIZ1Q04195 904 aa2.49□□□□□ -2.01
NIP100YPL174C SPE1P08432 466 aa2.49□□□□□ -2.01
NIP100YPL174C THI80P35202 319 aa2.49□□□□□ -2.01
NIP100YPL174C YAP1801P38856 637 aa2.49□□□□□ -2.01
NIP100YPL174C TIM54P47045 478 aa2.49□□□□□ -2.01
NIP100YPL174C SFB2P53953 876 aa2.49□□□□□ -2.01
NIP100YPL174C YDR132CQ03900 495 aa2.49□□□□□ -2.01
NIP100YPL174C AIM39Q08223 395 aa2.49□□□□□ -2.01
NIP100YPL174C PLB1P39105 664 aa2.48□□□□□ -2.01
NIP100YPL174C RIB2Q12362 591 aaKnown RBP2.48□□□□□ -2.01
NIP100YPL174C SED4P25365 1065 aa2.48□□□□□ -2.01
NIP100YPL174C CDC48P25694 835 aaKnown RBP2.48□□□□□ -2.01
NIP100YPL174C TRM2P33753 639 aa2.48□□□□□ -2.01
NIP100YPL174C YKL069WP36088 180 aa2.48□□□□□ -2.01
NIP100YPL174C GIC1P38785 314 aa2.48□□□□□ -2.01
NIP100YPL174C NOP12Q08208 459 aaKnown RBP2.48□□□□□ -2.01
NIP100YPL174C YLL058WQ12198 575 aa2.48□□□□□ -2.01
NIP100YPL174C NOT3P06102 836 aaKnown RBP2.47□□□□□ -2.01
NIP100YPL174C HIS5P07172 385 aa2.47□□□□□ -2.01
NIP100YPL174C PFK1P16861 987 aaKnown RBP2.47□□□□□ -2.01
NIP100YPL174C SRM1P21827 482 aa2.47□□□□□ -2.01
NIP100YPL174C RPC82P32349 654 aa2.47□□□□□ -2.01
NIP100YPL174C CDC12P32468 407 aaKnown RBP2.47□□□□□ -2.01
NIP100YPL174C SAP190P36123 1033 aa2.47□□□□□ -2.01
NIP100YPL174C YBR284WP38150 797 aa2.47□□□□□ -2.01
NIP100YPL174C YBR184WP38299 523 aa2.47□□□□□ -2.01
NIP100YPL174C IRR1P40541 1150 aa2.47□□□□□ -2.01
NIP100YPL174C AIM21P40563 679 aa2.47□□□□□ -2.01
NIP100YPL174C RAI1P53063 387 aaKnown RBP2.47□□□□□ -2.01
NIP100YPL174C SHE9Q04172 456 aa2.47□□□□□ -2.01
NIP100YPL174C EAF1Q06337 982 aa2.47□□□□□ -2.01
NIP100YPL174C YDL124WQ07551 312 aaKnown RBP2.47□□□□□ -2.01
NIP100YPL174C PNS1Q12412 539 aa2.47□□□□□ -2.01
NIP100YPL174C STE11P23561 717 aa2.47□□□□□ -2.01
NIP100YPL174C ECM21P38167 1117 aaKnown RBP2.47□□□□□ -2.01
NIP100YPL174C CEP3P40969 608 aa2.47□□□□□ -2.01
NIP100YPL174C NIT3P49954 291 aa2.47□□□□□ -2.01
NIP100YPL174C VPS62P53285 467 aa2.47□□□□□ -2.01
NIP100YPL174C DUS4Q06063 367 aa2.47□□□□□ -2.01
NIP100YPL174C UBX5Q06682 500 aa2.47□□□□□ -2.01
NIP100YPL174C HMI1Q12039 706 aa2.47□□□□□ -2.01
NIP100YPL174C YPR071WQ12346 211 aa2.47□□□□□ -2.01
NIP100YPL174C ERP6P53198 216 aa2.46□□□□□ -2.02
NIP100YPL174C TOM70P07213 617 aaKnown RBP2.46□□□□□ -2.02
NIP100YPL174C DOM34P33309 386 aa2.46□□□□□ -2.02
NIP100YPL174C SPF1P39986 1215 aaKnown RBP2.46□□□□□ -2.02
NIP100YPL174C HUL4P40985 892 aa2.46□□□□□ -2.02
NIP100YPL174C GUS1P46655 708 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
NIP100YPL174C CCM1P48237 864 aaPredicted RBP2.46□□□□□ -2.02
NIP100YPL174C YGR125WP53273 1036 aa2.46□□□□□ -2.02
NIP100YPL174C RAD4P14736 754 aa2.45□□□□□ -2.02
NIP100YPL174C HSP60P19882 572 aaKnown RBP2.45□□□□□ -2.02
NIP100YPL174C ATG19P35193 415 aa2.45□□□□□ -2.02
NIP100YPL174C YIL108WP40483 696 aaKnown RBP2.45□□□□□ -2.02
NIP100YPL174C GYP7P48365 746 aa2.45□□□□□ -2.02
NIP100YPL174C MSE1P48525 536 aa2.45□□□□□ -2.02
NIP100YPL174C NPC2Q12408 173 aa2.45□□□□□ -2.02
NIP100YPL174C YOR131CQ12486 218 aa2.45□□□□□ -2.02
NIP100YPL174C HRR25P29295 494 aaKnown RBP2.45□□□□□ -2.02
NIP100YPL174C MET12P46151 657 aa2.45□□□□□ -2.02
NIP100YPL174C JSN1P47135 1091 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
NIP100YPL174C UBA2P52488 636 aa2.45□□□□□ -2.02
NIP100YPL174C CDA1Q06702 301 aa2.45□□□□□ -2.02
NIP100YPL174C GRX1P25373 110 aaKnown RBP2.44□□□□□ -2.02
NIP100YPL174C YKL151CP36059 337 aa2.44□□□□□ -2.02
NIP100YPL174C PHO23P50947 330 aa2.44□□□□□ -2.02
NIP100YPL174C WHI4Q07655 649 aaKnown RBP2.44□□□□□ -2.02
NIP100YPL174C LST4P34239 828 aa2.44□□□□□ -2.02
NIP100YPL174C YKR078WP36158 585 aaKnown RBP2.44□□□□□ -2.02
NIP100YPL174C PAM1P37304 830 aaKnown RBP2.44□□□□□ -2.02
NIP100YPL174C LCD1Q04377 747 aa2.44□□□□□ -2.02
NIP100YPL174C ADY3Q07732 790 aa2.44□□□□□ -2.02
NIP100YPL174C SWM1Q12379 170 aa2.44□□□□□ -2.02
NIP100YPL174C REC104P33323 182 aa2.43□□□□□ -2.02
NIP100YPL174C SHR5P41912 237 aa2.43□□□□□ -2.02
NIP100YPL174C FMP25Q08023 583 aa2.43□□□□□ -2.02
NIP100YPL174C CDC53Q12018 815 aaKnown RBP2.43□□□□□ -2.02
NIP100YPL174C PRC1P00729 532 aa2.43□□□□□ -2.02
NIP100YPL174C GAL11P19659 1081 aa2.43□□□□□ -2.02
NIP100YPL174C PMI40P29952 429 aaKnown RBP2.43□□□□□ -2.02
NIP100YPL174C MTC3P53077 123 aa2.43□□□□□ -2.02
NIP100YPL174C CRR1Q05790 422 aa2.43□□□□□ -2.02
NIP100YPL174C NTO1Q12311 748 aa2.43□□□□□ -2.02
NIP100YPL174C TYE7P33122 291 aaPredicted RBP2.42□□□□□ -2.02
NIP100YPL174C TOK1P40310 691 aa2.42□□□□□ -2.02
NIP100YPL174C KCS1Q12494 1050 aa2.42□□□□□ -2.02
NIP100YPL174C CIT1P00890 479 aa2.42□□□□□ -2.02
NIP100YPL174C MET3P08536 511 aa2.42□□□□□ -2.02
NIP100YPL174C MPH2P0CD99 609 aa2.42□□□□□ -2.02
NIP100YPL174C NGG1P32494 702 aa2.42□□□□□ -2.02
NIP100YPL174C RPD3P32561 433 aa2.42□□□□□ -2.02
NIP100YPL174C ERT1P38140 529 aa2.42□□□□□ -2.02
NIP100YPL174C SUL1P38359 859 aa2.42□□□□□ -2.02
NIP100YPL174C TSL1P38427 1098 aaKnown RBP2.42□□□□□ -2.02
NIP100YPL174C SUN4P53616 420 aa2.42□□□□□ -2.02
NIP100YPL174C SSF2Q12153 453 aaPredicted RBP2.42□□□□□ -2.02
NIP100YPL174C NPP1P25353 742 aa2.41□□□□□ -2.02
NIP100YPL174C STE13P33894 931 aa2.41□□□□□ -2.02
NIP100YPL174C NPP2P39997 493 aa2.41□□□□□ -2.02
NIP100YPL174C PEX19Q07418 342 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms