RNA–Protein interactions for RNA: YOL142W

RRP40, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP40, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP40YOL142W HRQ1Q05549 1077 aa6.94□□□□□ -1.3
RRP40YOL142W CDA2Q06703 312 aa6.94□□□□□ -1.3
RRP40YOL142W RIB2Q12362 591 aaKnown RBP6.94□□□□□ -1.3
RRP40YOL142W PBY1P38254 753 aa6.93□□□□□ -1.3
RRP40YOL142W NIT1P40447 199 aa6.93□□□□□ -1.3
RRP40YOL142W IRR1P40541 1150 aa6.93□□□□□ -1.3
RRP40YOL142W YTA7P40340 1379 aa6.93□□□□□ -1.3
RRP40YOL142W TSC11P40061 1430 aa6.93□□□□□ -1.3
RRP40YOL142W CYC1P00044 109 aaPredicted RBP6.92□□□□□ -1.3
RRP40YOL142W KIN2P13186 1147 aaKnown RBP6.92□□□□□ -1.3
RRP40YOL142W APL1P27351 700 aa6.92□□□□□ -1.3
RRP40YOL142W YBR184WP38299 523 aa6.92□□□□□ -1.3
RRP40YOL142W TAT2P38967 592 aa6.92□□□□□ -1.3
RRP40YOL142W MTC3P53077 123 aa6.92□□□□□ -1.3
RRP40YOL142W PRP43P53131 767 aaKnown RBP6.92□□□□□ -1.3
RRP40YOL142W SNQ2P32568 1501 aaKnown RBP6.91□□□□□ -1.3
RRP40YOL142W ULS1Q08562 1619 aa6.91□□□□□ -1.3
RRP40YOL142W HFM1P51979 1187 aa6.91□□□□□ -1.3
RRP40YOL142W TRM732Q03496 1420 aa6.91□□□□□ -1.3
RRP40YOL142W CMP2P14747 604 aa6.9□□□□□ -1.3
RRP40YOL142W SAH1P39954 449 aaKnown RBP6.9□□□□□ -1.3
RRP40YOL142W GUS1P46655 708 aaKnown RBP RIP-Chip data6.9□□□□□ -1.3not detected
RRP40YOL142W NAN1Q02931 896 aaKnown RBP6.9□□□□□ -1.3
RRP40YOL142W DUS3Q06053 668 aaKnown RBP6.9□□□□□ -1.3
RRP40YOL142W MDM38Q08179 573 aa6.9□□□□□ -1.3
RRP40YOL142W YLL058WQ12198 575 aa6.9□□□□□ -1.3
RRP40YOL142W SRM1P21827 482 aa6.89□□□□□ -1.31
RRP40YOL142W CDC12P32468 407 aaKnown RBP6.89□□□□□ -1.31
RRP40YOL142W SIZ1Q04195 904 aa6.89□□□□□ -1.31
RRP40YOL142W SGD1Q06132 899 aa6.89□□□□□ -1.31
RRP40YOL142W GAL10P04397 699 aa6.88□□□□□ -1.31
RRP40YOL142W AIM3P38266 947 aaKnown RBP6.88□□□□□ -1.31
RRP40YOL142W IRC24P40580 263 aa6.88□□□□□ -1.31
RRP40YOL142W PFD1P46988 109 aa6.88□□□□□ -1.31
RRP40YOL142W SRP1Q02821 542 aaKnown RBP6.88□□□□□ -1.31
RRP40YOL142W YDR306CQ06640 478 aa6.88□□□□□ -1.31
RRP40YOL142W FMP25Q08023 583 aa6.88□□□□□ -1.31
RRP40YOL142W YOR352WQ08816 343 aa6.88□□□□□ -1.31
RRP40YOL142W NUP159P40477 1460 aa6.87□□□□□ -1.31
RRP40YOL142W RAD4P14736 754 aa6.87□□□□□ -1.31
RRP40YOL142W MSC2Q03455 724 aa6.87□□□□□ -1.31
RRP40YOL142W XYL2Q07993 356 aa6.87□□□□□ -1.31
RRP40YOL142W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.87□□□□□ -1.31not detected
RRP40YOL142W GIC1P38785 314 aa6.86□□□□□ -1.31
RRP40YOL142W LAM1P38851 1228 aa6.86□□□□□ -1.31
RRP40YOL142W YJL049WP47048 450 aa6.86□□□□□ -1.31
RRP40YOL142W SRT1Q03175 343 aa6.86□□□□□ -1.31
RRP40YOL142W PLB2Q03674 706 aa6.86□□□□□ -1.31
RRP40YOL142W ROT1Q03691 256 aa6.86□□□□□ -1.31
RRP40YOL142W OSW2Q12202 724 aa6.86□□□□□ -1.31
RRP40YOL142W BNI1P41832 1953 aa6.86□□□□□ -1.31
RRP40YOL142W PRP9P19736 530 aaKnown RBP6.85□□□□□ -1.31
RRP40YOL142W MEF2P39677 819 aa6.85□□□□□ -1.31
RRP40YOL142W NNF1P47149 201 aa6.85□□□□□ -1.31
RRP40YOL142W SPO75Q07798 868 aa6.85□□□□□ -1.31
RRP40YOL142W YPL277CQ08989 487 aa6.85□□□□□ -1.31
RRP40YOL142W SNT2P53127 1403 aa6.84□□□□□ -1.31
RRP40YOL142W RPS13P05756 151 aaKnown RBP6.84□□□□□ -1.31
RRP40YOL142W PRP6P19735 899 aaPredicted RBP6.84□□□□□ -1.31
RRP40YOL142W RPL8BP29453 256 aaKnown RBP6.84□□□□□ -1.31
RRP40YOL142W FUN30P31380 1131 aa6.84□□□□□ -1.31
RRP40YOL142W PPH3P32345 308 aa6.84□□□□□ -1.31
RRP40YOL142W AAR2P32357 355 aaPredicted RBP6.84□□□□□ -1.31
RRP40YOL142W YAP1801P38856 637 aa6.84□□□□□ -1.31
RRP40YOL142W NPP2P39997 493 aa6.84□□□□□ -1.31
RRP40YOL142W RIM8P53179 542 aa6.84□□□□□ -1.31
RRP40YOL142W YDR132CQ03900 495 aa6.84□□□□□ -1.31
RRP40YOL142W PDR15Q04182 1529 aaKnown RBP6.84□□□□□ -1.31
RRP40YOL142W SOD2P00447 233 aa6.83□□□□□ -1.32
RRP40YOL142W HBS1P32769 611 aaKnown RBP6.83□□□□□ -1.32
RRP40YOL142W ALR2P43553 858 aa6.83□□□□□ -1.32
RRP40YOL142W UTP8P53276 713 aaKnown RBP6.83□□□□□ -1.32
RRP40YOL142W GCN5Q03330 439 aa6.83□□□□□ -1.32
RRP40YOL142W SPO14P36126 1683 aa6.83□□□□□ -1.32
RRP40YOL142W LTE1P07866 1435 aa6.83□□□□□ -1.32
RRP40YOL142W IRC20Q06554 1556 aa6.82□□□□□ -1.32
RRP40YOL142W VPS15P22219 1454 aa6.82□□□□□ -1.32
RRP40YOL142W THI80P35202 319 aa6.82□□□□□ -1.32
RRP40YOL142W UBP5P39944 805 aa6.82□□□□□ -1.32
RRP40YOL142W TIM54P47045 478 aa6.82□□□□□ -1.32
RRP40YOL142W TPO2P53283 614 aa6.82□□□□□ -1.32
RRP40YOL142W EAF1Q06337 982 aa6.82□□□□□ -1.32
RRP40YOL142W SIT1P39980 628 aa6.81□□□□□ -1.32
RRP40YOL142W GYP7P48365 746 aa6.81□□□□□ -1.32
RRP40YOL142W ERP6P53198 216 aa6.81□□□□□ -1.32
RRP40YOL142W SFB2P53953 876 aa6.81□□□□□ -1.32
RRP40YOL142W DUS4Q06063 367 aa6.81□□□□□ -1.32
RRP40YOL142W UBX5Q06682 500 aa6.81□□□□□ -1.32
RRP40YOL142W OSH2Q12451 1283 aa6.81□□□□□ -1.32
RRP40YOL142W ADE8P04161 214 aa6.8□□□□□ -1.32
RRP40YOL142W NPP1P25353 742 aa6.8□□□□□ -1.32
RRP40YOL142W AFR1P33304 620 aa6.8□□□□□ -1.32
RRP40YOL142W ECM21P38167 1117 aaKnown RBP6.8□□□□□ -1.32
RRP40YOL142W ARE1P25628 610 aa6.79□□□□□ -1.32
RRP40YOL142W TOD6P34219 525 aa6.79□□□□□ -1.32
RRP40YOL142W YRO2P38079 344 aa6.79□□□□□ -1.32
RRP40YOL142W TSL1P38427 1098 aaKnown RBP6.79□□□□□ -1.32
RRP40YOL142W CCC2P38995 1004 aa6.79□□□□□ -1.32
RRP40YOL142W ZRG8P40021 1076 aa6.79□□□□□ -1.32
RRP40YOL142W YER158CP40095 573 aa6.79□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 129.1 ms