RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SQS1	YNL224C	PIH1	P38768	344 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	ERP5	P38819	212 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	CRP1	P38845	465 aa	Known RBP	3.55	□□□□□ -1.84
SQS1	YNL224C	YIL166C	P40445	542 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	APS3	P47064	194 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	PEX14	P53112	341 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	ERV25	P54837	211 aa	Known RBP	3.55	□□□□□ -1.84
SQS1	YNL224C	YMR102C	Q03177	834 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	PML39	Q03760	334 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	LCD1	Q04377	747 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	REH1	Q06709	432 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	SMC6	Q12749	1114 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	YBL113C	Q7M4S9	792 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	SRN2	Q99176	213 aa		3.55	□□□□□ -1.84
SQS1	YNL224C	MET6	P05694	767 aa	Known RBP	3.54	□□□□□ -1.84
SQS1	YNL224C	STI1	P15705	589 aa	Known RBP RIP-Chip data	3.54	□□□□□ -1.84	not detected
SQS1	YNL224C	RPC31	P17890	251 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	PRP6	P19735	899 aa	Predicted RBP	3.54	□□□□□ -1.84
SQS1	YNL224C	MCM3	P24279	971 aa	Known RBP	3.54	□□□□□ -1.84
SQS1	YNL224C	NAM7	P30771	971 aa	Known RBP	3.54	□□□□□ -1.84
SQS1	YNL224C	IMP2'	P32351	346 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	CBF2	P32504	956 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	SCT1	P32784	759 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	UBC6	P33296	250 aa	Predicted RBP	3.54	□□□□□ -1.84
SQS1	YNL224C	PTC3	P34221	468 aa	Known RBP	3.54	□□□□□ -1.84
SQS1	YNL224C	CCZ1	P38273	704 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	AIM10	P39965	576 aa	Known RBP	3.54	□□□□□ -1.84
SQS1	YNL224C	ISM1	P48526	1002 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	YGR250C	P53316	781 aa	Known RBP	3.54	□□□□□ -1.84
SQS1	YNL224C	YPL062W	Q02781	134 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	FMP30	Q02883	468 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	YDL144C	Q07589	356 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	NOP6	Q07623	225 aa	Known RBP	3.54	□□□□□ -1.84
SQS1	YNL224C	CUE5	Q08412	411 aa	Known RBP	3.54	□□□□□ -1.84
SQS1	YNL224C	AVL9	Q12500	764 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	ADE8	P04161	214 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	ENA1	P13587	1091 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	NCP1	P16603	691 aa	Known RBP	3.54	□□□□□ -1.84
SQS1	YNL224C	PRP9	P19736	530 aa	Known RBP	3.54	□□□□□ -1.84
SQS1	YNL224C	RRP43	P25359	394 aa	Predicted RBP	3.54	□□□□□ -1.84
SQS1	YNL224C	SPS22	P25380	463 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	RSM22	P36056	628 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	MRPL40	P36534	297 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	YHL050C	P38721	697 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	PET100	P38958	111 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	3.54	□□□□□ -1.84	not detected
SQS1	YNL224C	TMA108	P40462	946 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	GYP8	P43570	497 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	AIP1	P46680	615 aa	Known RBP	3.54	□□□□□ -1.84
SQS1	YNL224C	JJJ2	P46997	583 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	SNX4	P47057	423 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	YJR098C	P47139	656 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	UBX4	P54730	416 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	ENA2	Q01896	1091 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	RPM2	Q02773	1202 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	VPS36	Q06696	566 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	ABP140	Q08641	628 aa	Known RBP	3.54	□□□□□ -1.84
SQS1	YNL224C	TMA17	Q12513	150 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	ENA5	Q12691	1091 aa		3.54	□□□□□ -1.84
SQS1	YNL224C	HSF1	P10961	833 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	MET8	P15807	274 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	KGD2	P19262	463 aa	Predicted RBP	3.53	□□□□□ -1.84
SQS1	YNL224C	LCB1	P25045	558 aa	Known RBP	3.53	□□□□□ -1.84
SQS1	YNL224C	RAM2	P29703	316 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	RPT5	P33297	434 aa	Known RBP	3.53	□□□□□ -1.84
SQS1	YNL224C	CHK1	P38147	527 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	SMF2	P38778	549 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	VPS8	P39702	1274 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	GEM1	P39722	662 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	ZRG8	P40021	1076 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	YER137C	P40083	148 aa	Known RBP	3.53	□□□□□ -1.84
SQS1	YNL224C	GPD2	P41911	440 aa	Known RBP	3.53	□□□□□ -1.84
SQS1	YNL224C	SGM1	P47166	707 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	LYS4	P49367	693 aa	Predicted RBP	3.53	□□□□□ -1.84
SQS1	YNL224C	YGL140C	P53120	1219 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	SPC105	P53148	917 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	DSE4	P53753	1117 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	YML131W	Q03102	365 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	VPS16	Q03308	798 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	PRP42	Q03776	544 aa	Known RBP	3.53	□□□□□ -1.84
SQS1	YNL224C	ECM7	Q06200	448 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	GMC2	Q06201	188 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	CRN1	Q06440	651 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	RSC3	Q06639	885 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	TYW1	Q08960	810 aa	Known RBP	3.53	□□□□□ -1.84
SQS1	YNL224C	ACF2	Q12168	779 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	ENT1	Q12518	454 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	CTT1	P06115	562 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	NTG1	P31378	399 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	SSH4	P32343	579 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	MCM10	P32354	571 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	MGM101	P32787	269 aa	Known RBP	3.53	□□□□□ -1.84
SQS1	YNL224C	SEC66	P33754	206 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	DHR2	P36009	735 aa	Predicted RBP	3.53	□□□□□ -1.84
SQS1	YNL224C	PSY4	P38193	441 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	MSG5	P38590	489 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	RIM4	P38741	713 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	NUP82	P40368	713 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	MDJ2	P42834	146 aa		3.53	□□□□□ -1.84
SQS1	YNL224C	GIM3	P53900	129 aa		3.53	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms