RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeastyeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PML39YML107C MRPL22P53881 309 aa5.57□□□□□ -1.52
PML39YML107C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
PML39YML107C ENA1P13587 1091 aa5.56□□□□□ -1.52
PML39YML107C DOM34P33309 386 aa5.56□□□□□ -1.52
PML39YML107C YKR078WP36158 585 aaKnown RBP5.56□□□□□ -1.52
PML39YML107C YAP1801P38856 637 aa5.56□□□□□ -1.52
PML39YML107C TAF1P46677 1066 aa5.56□□□□□ -1.52
PML39YML107C GYP7P48365 746 aa5.56□□□□□ -1.52
PML39YML107C ENA2Q01896 1091 aa5.56□□□□□ -1.52
PML39YML107C YDL177CQ12257 170 aa5.56□□□□□ -1.52
PML39YML107C ENA5Q12691 1091 aa5.56□□□□□ -1.52
PML39YML107C MSD1P15179 658 aaKnown RBP5.55□□□□□ -1.52
PML39YML107C CDC48P25694 835 aaKnown RBP5.55□□□□□ -1.52
PML39YML107C REC104P33323 182 aa5.55□□□□□ -1.52
PML39YML107C GIP4P39732 760 aa5.55□□□□□ -1.52
PML39YML107C ORC1P54784 914 aaPredicted RBP5.55□□□□□ -1.52
PML39YML107C MSC2Q03455 724 aa5.55□□□□□ -1.52
PML39YML107C SGD1Q06132 899 aa5.55□□□□□ -1.52
PML39YML107C XYL2Q07993 356 aa5.55□□□□□ -1.52
PML39YML107C RIB2Q12362 591 aaKnown RBP5.55□□□□□ -1.52
PML39YML107C AIM44Q99299 758 aa5.55□□□□□ -1.52
PML39YML107C GAL10P04397 699 aa5.54□□□□□ -1.52
PML39YML107C NPP1P25353 742 aa5.54□□□□□ -1.52
PML39YML107C RPC82P32349 654 aa5.54□□□□□ -1.52
PML39YML107C PPG1P32838 368 aa5.54□□□□□ -1.52
PML39YML107C TIM23P32897 222 aa5.54□□□□□ -1.52
PML39YML107C PET10P36139 283 aa5.54□□□□□ -1.52
PML39YML107C ECM21P38167 1117 aaKnown RBP5.54□□□□□ -1.52
PML39YML107C TSL1P38427 1098 aaKnown RBP5.54□□□□□ -1.52
PML39YML107C ZRG8P40021 1076 aa5.54□□□□□ -1.52
PML39YML107C NUP82P40368 713 aa5.54□□□□□ -1.52
PML39YML107C PBP1P53297 722 aaKnown RBP5.54□□□□□ -1.52
PML39YML107C SFB2P53953 876 aa5.54□□□□□ -1.52
PML39YML107C ROT1Q03691 256 aa5.54□□□□□ -1.52
PML39YML107C SIZ1Q04195 904 aa5.54□□□□□ -1.52
PML39YML107C TOP3P13099 656 aa5.53□□□□□ -1.52
PML39YML107C RFA1P22336 621 aaKnown RBP5.53□□□□□ -1.52
PML39YML107C SRP101P32916 621 aa5.53□□□□□ -1.52
PML39YML107C THI80P35202 319 aa5.53□□□□□ -1.52
PML39YML107C TOK1P40310 691 aa5.53□□□□□ -1.52
PML39YML107C BUD6P41697 788 aa5.53□□□□□ -1.52
PML39YML107C UBP6P43593 499 aaKnown RBP5.53□□□□□ -1.52
PML39YML107C YLR125WQ12138 136 aa5.53□□□□□ -1.52
PML39YML107C CIT2P08679 460 aa5.52□□□□□ -1.53
PML39YML107C PHO8P11491 566 aa5.52□□□□□ -1.53
PML39YML107C BET3P36149 193 aa5.52□□□□□ -1.53
PML39YML107C ERT1P38140 529 aa5.52□□□□□ -1.53
PML39YML107C LAM1P38851 1228 aa5.52□□□□□ -1.53
PML39YML107C NPP2P39997 493 aa5.52□□□□□ -1.53
PML39YML107C PSP2P50109 593 aaKnown RBP5.52□□□□□ -1.53
PML39YML107C RTA1P53047 317 aa5.52□□□□□ -1.53
PML39YML107C YGR012WP53206 393 aa5.52□□□□□ -1.53
PML39YML107C GTF1P53260 183 aaPredicted RBP5.52□□□□□ -1.53
PML39YML107C ERR1P0CX10 437 aa5.51□□□□□ -1.53
PML39YML107C ERR2P0CX11 437 aa5.51□□□□□ -1.53
PML39YML107C HSF1P10961 833 aa5.51□□□□□ -1.53
PML39YML107C PRP6P19735 899 aaPredicted RBP5.51□□□□□ -1.53
PML39YML107C AFR1P33304 620 aa5.51□□□□□ -1.53
PML39YML107C AIM3P38266 947 aaKnown RBP5.51□□□□□ -1.53
PML39YML107C NIT3P49954 291 aa5.51□□□□□ -1.53
PML39YML107C VPS30Q02948 557 aa5.51□□□□□ -1.53
PML39YML107C PPM2Q08282 695 aa5.51□□□□□ -1.53
PML39YML107C MET6P05694 767 aaKnown RBP5.5□□□□□ -1.53
PML39YML107C SRM1P21827 482 aa5.5□□□□□ -1.53
PML39YML107C POA1P38218 177 aa5.5□□□□□ -1.53
PML39YML107C RNH70P53331 553 aa5.5□□□□□ -1.53
PML39YML107C BUL2Q03758 920 aaKnown RBP5.5□□□□□ -1.53
PML39YML107C PHR1P05066 565 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
PML39YML107C RPS13P05756 151 aaKnown RBP5.49□□□□□ -1.53
PML39YML107C NOT3P06102 836 aaKnown RBP5.49□□□□□ -1.53
PML39YML107C THI4P32318 326 aa5.49□□□□□ -1.53
PML39YML107C MEF2P39677 819 aa5.49□□□□□ -1.53
PML39YML107C ALG2P43636 503 aa5.49□□□□□ -1.53
PML39YML107C HSV2P50079 448 aaPredicted RBP5.49□□□□□ -1.53
PML39YML107C RAI1P53063 387 aaKnown RBP5.49□□□□□ -1.53
PML39YML107C RPP2AP05319 106 aaKnown RBP5.48□□□□□ -1.53
PML39YML107C MND2P40577 368 aa5.48□□□□□ -1.53
PML39YML107C SPT20P50875 604 aa5.48□□□□□ -1.53
PML39YML107C PLB2Q03674 706 aa5.48□□□□□ -1.53
PML39YML107C RXT3Q07458 294 aa5.48□□□□□ -1.53
PML39YML107C RPS9AO13516 197 aaKnown RBP5.47□□□□□ -1.53
PML39YML107C FLR1P38124 548 aa5.47□□□□□ -1.53
PML39YML107C CEP3P40969 608 aa5.47□□□□□ -1.53
PML39YML107C GCV2P49095 1034 aa5.47□□□□□ -1.53
PML39YML107C YKE2P52553 114 aa5.47□□□□□ -1.53
PML39YML107C GCN5Q03330 439 aa5.47□□□□□ -1.53
PML39YML107C CDA1Q06702 301 aa5.47□□□□□ -1.53
PML39YML107C GPB1Q08886 897 aa5.47□□□□□ -1.53
PML39YML107C MPH2P0CD99 609 aa5.46□□□□□ -1.54
PML39YML107C YBR238CP38330 731 aaKnown RBP5.46□□□□□ -1.54
PML39YML107C NMD2P38798 1089 aaKnown RBP5.46□□□□□ -1.54
PML39YML107C GDH3P39708 457 aa5.46□□□□□ -1.54
PML39YML107C DAM1P53267 343 aa5.46□□□□□ -1.54
PML39YML107C POB3Q04636 552 aaKnown RBP5.46□□□□□ -1.54
PML39YML107C SOD2P00447 233 aa5.45□□□□□ -1.54
PML39YML107C ATG19P35193 415 aa5.45□□□□□ -1.54
PML39YML107C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
PML39YML107C RIM8P53179 542 aa5.45□□□□□ -1.54
PML39YML107C TPO1Q07824 586 aa5.45□□□□□ -1.54
PML39YML107C YPL277CQ08989 487 aa5.45□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms