RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CST9	YLR394W	RXT3	Q07458	294 aa		4.76	□□□□□ -1.65
CST9	YLR394W	ACK1	Q07622	623 aa	Predicted RBP	4.76	□□□□□ -1.65
CST9	YLR394W	NTO1	Q12311	748 aa		4.76	□□□□□ -1.65
CST9	YLR394W	CDC6	P09119	513 aa		4.75	□□□□□ -1.65
CST9	YLR394W	PMI40	P29952	429 aa	Known RBP	4.75	□□□□□ -1.65
CST9	YLR394W	CDC12	P32468	407 aa	Known RBP	4.75	□□□□□ -1.65
CST9	YLR394W	LST4	P34239	828 aa		4.75	□□□□□ -1.65
CST9	YLR394W	ERT1	P38140	529 aa		4.75	□□□□□ -1.65
CST9	YLR394W	MCM6	P53091	1017 aa	Known RBP	4.75	□□□□□ -1.65
CST9	YLR394W	CTF4	Q01454	927 aa		4.75	□□□□□ -1.65
CST9	YLR394W	TAF8	Q03750	510 aa		4.75	□□□□□ -1.65
CST9	YLR394W	YDR306C	Q06640	478 aa		4.75	□□□□□ -1.65
CST9	YLR394W	SPO75	Q07798	868 aa		4.75	□□□□□ -1.65
CST9	YLR394W	SVS1	Q12254	260 aa		4.75	□□□□□ -1.65
CST9	YLR394W	CAN1	P04817	590 aa		4.74	□□□□□ -1.65
CST9	YLR394W	TOP3	P13099	656 aa		4.74	□□□□□ -1.65
CST9	YLR394W	HSP60	P19882	572 aa	Known RBP	4.74	□□□□□ -1.65
CST9	YLR394W	NPP1	P25353	742 aa		4.74	□□□□□ -1.65
CST9	YLR394W	BET3	P36149	193 aa		4.74	□□□□□ -1.65
CST9	YLR394W	ERP6	P53198	216 aa		4.74	□□□□□ -1.65
CST9	YLR394W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
CST9	YLR394W	DUS3	Q06053	668 aa	Known RBP	4.74	□□□□□ -1.65
CST9	YLR394W	TMA10	Q06177	86 aa		4.74	□□□□□ -1.65
CST9	YLR394W	HBN1	Q96VH4	193 aa		4.74	□□□□□ -1.65
CST9	YLR394W	ERR1	P0CX10	437 aa		4.73	□□□□□ -1.65
CST9	YLR394W	ERR2	P0CX11	437 aa		4.73	□□□□□ -1.65
CST9	YLR394W	ARE1	P25628	610 aa		4.73	□□□□□ -1.65
CST9	YLR394W	YBR284W	P38150	797 aa		4.73	□□□□□ -1.65
CST9	YLR394W	SNF7	P39929	240 aa	Known RBP	4.73	□□□□□ -1.65
CST9	YLR394W	BUL2	Q03758	920 aa	Known RBP	4.73	□□□□□ -1.65
CST9	YLR394W	SIZ1	Q04195	904 aa		4.73	□□□□□ -1.65
CST9	YLR394W	ATG13	Q06628	738 aa		4.73	□□□□□ -1.65
CST9	YLR394W	GPB1	Q08886	897 aa		4.73	□□□□□ -1.65
CST9	YLR394W	OSH2	Q12451	1283 aa		4.73	□□□□□ -1.65
CST9	YLR394W	TIM23	P32897	222 aa		4.72	□□□□□ -1.65
CST9	YLR394W	AIM21	P40563	679 aa		4.72	□□□□□ -1.65
CST9	YLR394W	HFM1	P51979	1187 aa		4.72	□□□□□ -1.65
CST9	YLR394W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
CST9	YLR394W	XYL2	Q07993	356 aa		4.72	□□□□□ -1.65
CST9	YLR394W	MDM38	Q08179	573 aa		4.72	□□□□□ -1.65
CST9	YLR394W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
CST9	YLR394W	PRP9	P19736	530 aa	Known RBP	4.72	□□□□□ -1.65
CST9	YLR394W	ACE2	P21192	770 aa		4.72	□□□□□ -1.65
CST9	YLR394W	RAD53	P22216	821 aa		4.72	□□□□□ -1.65
CST9	YLR394W	GIC1	P38785	314 aa		4.72	□□□□□ -1.65
CST9	YLR394W	CCC2	P38995	1004 aa		4.72	□□□□□ -1.65
CST9	YLR394W	SAH1	P39954	449 aa	Known RBP	4.72	□□□□□ -1.65
CST9	YLR394W	NUP82	P40368	713 aa		4.72	□□□□□ -1.65
CST9	YLR394W	PBP1	P53297	722 aa	Known RBP	4.72	□□□□□ -1.65
CST9	YLR394W	FPR4	Q06205	392 aa	Predicted RBP	4.72	□□□□□ -1.65
CST9	YLR394W	YOR131C	Q12486	218 aa		4.72	□□□□□ -1.65
CST9	YLR394W	KIN2	P13186	1147 aa	Known RBP	4.71	□□□□□ -1.66
CST9	YLR394W	APL1	P27351	700 aa		4.71	□□□□□ -1.66
CST9	YLR394W	AAR2	P32357	355 aa	Predicted RBP	4.71	□□□□□ -1.66
CST9	YLR394W	CHS7	P38843	316 aa		4.71	□□□□□ -1.66
CST9	YLR394W	SIT1	P39980	628 aa		4.71	□□□□□ -1.66
CST9	YLR394W	RNH70	P53331	553 aa		4.71	□□□□□ -1.66
CST9	YLR394W	YML122C	Q03207	126 aa		4.71	□□□□□ -1.66
CST9	YLR394W	YPR071W	Q12346	211 aa		4.71	□□□□□ -1.66
CST9	YLR394W	MSD1	P15179	658 aa	Known RBP	4.7	□□□□□ -1.66
CST9	YLR394W	YRO2	P38079	344 aa		4.7	□□□□□ -1.66
CST9	YLR394W	TSL1	P38427	1098 aa	Known RBP	4.7	□□□□□ -1.66
CST9	YLR394W	PHO23	P50947	330 aa		4.7	□□□□□ -1.66
CST9	YLR394W	VPS62	P53285	467 aa		4.7	□□□□□ -1.66
CST9	YLR394W	SFB2	P53953	876 aa		4.7	□□□□□ -1.66
CST9	YLR394W	SRT1	Q03175	343 aa		4.7	□□□□□ -1.66
CST9	YLR394W	MSC2	Q03455	724 aa		4.7	□□□□□ -1.66
CST9	YLR394W	GTF1	P53260	183 aa	Predicted RBP	4.69	□□□□□ -1.66
CST9	YLR394W	SRP1	Q02821	542 aa	Known RBP	4.69	□□□□□ -1.66
CST9	YLR394W	YAP6	Q03935	383 aa		4.69	□□□□□ -1.66
CST9	YLR394W	YLL058W	Q12198	575 aa		4.69	□□□□□ -1.66
CST9	YLR394W	THS1	P04801	734 aa	Known RBP	4.68	□□□□□ -1.66
CST9	YLR394W	PMA1	P05030	918 aa	Known RBP	4.68	□□□□□ -1.66
CST9	YLR394W	GAL11	P19659	1081 aa		4.68	□□□□□ -1.66
CST9	YLR394W	PPH3	P32345	308 aa		4.68	□□□□□ -1.66
CST9	YLR394W	PET10	P36139	283 aa		4.68	□□□□□ -1.66
CST9	YLR394W	CHZ1	P40019	153 aa	Predicted RBP	4.68	□□□□□ -1.66
CST9	YLR394W	TOK1	P40310	691 aa		4.68	□□□□□ -1.66
CST9	YLR394W	RRT14	P40470	206 aa		4.68	□□□□□ -1.66
CST9	YLR394W	GYP7	P48365	746 aa		4.68	□□□□□ -1.66
CST9	YLR394W	MAL11	P53048	616 aa		4.68	□□□□□ -1.66
CST9	YLR394W	HMI1	Q12039	706 aa		4.68	□□□□□ -1.66
CST9	YLR394W	DCG1	P32460	244 aa		4.67	□□□□□ -1.66
CST9	YLR394W	GGA2	P38817	585 aa	Known RBP	4.67	□□□□□ -1.66
CST9	YLR394W	HUL4	P40985	892 aa		4.67	□□□□□ -1.66
CST9	YLR394W	GCV2	P49095	1034 aa		4.67	□□□□□ -1.66
CST9	YLR394W	ADE8	P04161	214 aa		4.66	□□□□□ -1.66
CST9	YLR394W	EMC1	P25574	760 aa		4.66	□□□□□ -1.66
CST9	YLR394W	YAP1801	P38856	637 aa		4.66	□□□□□ -1.66
CST9	YLR394W	UBP6	P43593	499 aa	Known RBP	4.66	□□□□□ -1.66
CST9	YLR394W	YKE2	P52553	114 aa		4.66	□□□□□ -1.66
CST9	YLR394W	ALG12	P53730	551 aa		4.66	□□□□□ -1.66
CST9	YLR394W	YLR224W	Q05947	369 aa		4.66	□□□□□ -1.66
CST9	YLR394W	YDL124W	Q07551	312 aa	Known RBP	4.66	□□□□□ -1.66
CST9	YLR394W	PHO8	P11491	566 aa		4.65	□□□□□ -1.66
CST9	YLR394W	FUN30	P31380	1131 aa		4.65	□□□□□ -1.66
CST9	YLR394W	DEF1	P35732	738 aa	Known RBP	4.65	□□□□□ -1.66
CST9	YLR394W	LCD1	Q04377	747 aa		4.65	□□□□□ -1.66
CST9	YLR394W	CDC11	P32458	415 aa		4.64	□□□□□ -1.67
CST9	YLR394W	ECM21	P38167	1117 aa	Known RBP	4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms