RNA–Protein interactions for RNA: YLR223C

IFH1, Transcript of Coactivator, regulates transcription of ribosomal protein (RP) genes, yeastyeast

Gene IFH1, Length 3,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IFH1YLR223C PHO23P50947 330 aa2.12□□□□□ -2.07
IFH1YLR223C SFB2P53953 876 aa2.12□□□□□ -2.07
IFH1YLR223C NOP12Q08208 459 aaKnown RBP2.12□□□□□ -2.07
IFH1YLR223C HIS5P07172 385 aa2.12□□□□□ -2.07
IFH1YLR223C STE11P23561 717 aa2.12□□□□□ -2.07
IFH1YLR223C CDC11P32458 415 aa2.12□□□□□ -2.07
IFH1YLR223C MRP8P35719 219 aa2.12□□□□□ -2.07
IFH1YLR223C SAP190P36123 1033 aa2.12□□□□□ -2.07
IFH1YLR223C DUS4Q06063 367 aa2.12□□□□□ -2.07
IFH1YLR223C OSH2Q12451 1283 aa2.12□□□□□ -2.07
IFH1YLR223C SRM1P21827 482 aa2.11□□□□□ -2.07
IFH1YLR223C VBA5P36172 582 aa2.11□□□□□ -2.07
IFH1YLR223C YAP1801P38856 637 aa2.11□□□□□ -2.07
IFH1YLR223C SRT1Q03175 343 aa2.11□□□□□ -2.07
IFH1YLR223C SIZ1Q04195 904 aa2.11□□□□□ -2.07
IFH1YLR223C YPL066WQ12194 479 aa2.11□□□□□ -2.07
IFH1YLR223C PRP9P19736 530 aaKnown RBP2.11□□□□□ -2.07
IFH1YLR223C GRX1P25373 110 aaKnown RBP2.11□□□□□ -2.07
IFH1YLR223C CEP3P40969 608 aa2.11□□□□□ -2.07
IFH1YLR223C ALR2P43553 858 aa2.11□□□□□ -2.07
IFH1YLR223C TIM54P47045 478 aa2.11□□□□□ -2.07
IFH1YLR223C VPS62P53285 467 aa2.11□□□□□ -2.07
IFH1YLR223C HMI1Q12039 706 aa2.11□□□□□ -2.07
IFH1YLR223C NOT3P06102 836 aaKnown RBP2.11□□□□□ -2.07
IFH1YLR223C AGP1P25376 633 aa2.11□□□□□ -2.07
IFH1YLR223C ARE1P25628 610 aa2.11□□□□□ -2.07
IFH1YLR223C SIP5P40210 489 aaKnown RBP2.11□□□□□ -2.07
IFH1YLR223C RAI1P53063 387 aaKnown RBP2.11□□□□□ -2.07
IFH1YLR223C YGR053CP53234 283 aa2.11□□□□□ -2.07
IFH1YLR223C RIB2Q12362 591 aaKnown RBP2.11□□□□□ -2.07
IFH1YLR223C RAD4P14736 754 aa2.1□□□□□ -2.07
IFH1YLR223C SUL1P38359 859 aa2.1□□□□□ -2.07
IFH1YLR223C YIL108WP40483 696 aaKnown RBP2.1□□□□□ -2.07
IFH1YLR223C SUN4P53616 420 aa2.1□□□□□ -2.07
IFH1YLR223C YMR206WQ03695 313 aa2.1□□□□□ -2.07
IFH1YLR223C CRR1Q05790 422 aa2.1□□□□□ -2.07
IFH1YLR223C SPO75Q07798 868 aa2.1□□□□□ -2.07
IFH1YLR223C LST4P34239 828 aa2.1□□□□□ -2.07
IFH1YLR223C ECM21P38167 1117 aaKnown RBP2.1□□□□□ -2.07
IFH1YLR223C YBR184WP38299 523 aa2.1□□□□□ -2.07
IFH1YLR223C NAN1Q02931 896 aaKnown RBP2.1□□□□□ -2.07
IFH1YLR223C CDC53Q12018 815 aaKnown RBP2.1□□□□□ -2.07
IFH1YLR223C NTO1Q12311 748 aa2.1□□□□□ -2.07
IFH1YLR223C NPC2Q12408 173 aa2.1□□□□□ -2.07
IFH1YLR223C CDC48P25694 835 aaKnown RBP2.09□□□□□ -2.07
IFH1YLR223C SRP40P32583 406 aaPredicted RBP2.09□□□□□ -2.07
IFH1YLR223C DOM34P33309 386 aa2.09□□□□□ -2.07
IFH1YLR223C YBR284WP38150 797 aa2.09□□□□□ -2.07
IFH1YLR223C PBY1P38254 753 aa2.09□□□□□ -2.07
IFH1YLR223C GIC1P38785 314 aa2.09□□□□□ -2.07
IFH1YLR223C WHI4Q07655 649 aaKnown RBP2.09□□□□□ -2.07
IFH1YLR223C PUS9Q12069 462 aa2.09□□□□□ -2.07
IFH1YLR223C YPR071WQ12346 211 aa2.09□□□□□ -2.07
IFH1YLR223C SWM1Q12379 170 aa2.09□□□□□ -2.07
IFH1YLR223C PMI40P29952 429 aaKnown RBP2.09□□□□□ -2.07
IFH1YLR223C SPF1P39986 1215 aaKnown RBP2.09□□□□□ -2.07
IFH1YLR223C STU2P46675 888 aa2.09□□□□□ -2.07
IFH1YLR223C NNF1P47149 201 aa2.09□□□□□ -2.07
IFH1YLR223C UBX5Q06682 500 aa2.09□□□□□ -2.07
IFH1YLR223C SSF2Q12153 453 aaPredicted RBP2.09□□□□□ -2.07
IFH1YLR223C RPC82P32349 654 aa2.09□□□□□ -2.08
IFH1YLR223C MET12P46151 657 aa2.09□□□□□ -2.08
IFH1YLR223C NIT3P49954 291 aa2.09□□□□□ -2.08
IFH1YLR223C YLL058WQ12198 575 aa2.09□□□□□ -2.08
IFH1YLR223C YOR131CQ12486 218 aa2.09□□□□□ -2.08
IFH1YLR223C ATG19P35193 415 aa2.08□□□□□ -2.08
IFH1YLR223C YGR125WP53273 1036 aa2.08□□□□□ -2.08
IFH1YLR223C EAF1Q06337 982 aa2.08□□□□□ -2.08
IFH1YLR223C YKL091CP33324 310 aaKnown RBP2.08□□□□□ -2.08
IFH1YLR223C TIM44Q01852 431 aa2.08□□□□□ -2.08
IFH1YLR223C CDA1Q06702 301 aa2.08□□□□□ -2.08
IFH1YLR223C YDL124WQ07551 312 aaKnown RBP2.08□□□□□ -2.08
IFH1YLR223C TOM70P07213 617 aaKnown RBP2.08□□□□□ -2.08
IFH1YLR223C MET3P08536 511 aa2.08□□□□□ -2.08
IFH1YLR223C CDC12P32468 407 aaKnown RBP2.08□□□□□ -2.08
IFH1YLR223C CCM1P48237 864 aaPredicted RBP2.08□□□□□ -2.08
IFH1YLR223C GYP7P48365 746 aa2.08□□□□□ -2.08
IFH1YLR223C HUL5P53119 910 aa2.08□□□□□ -2.08
IFH1YLR223C ADY3Q07732 790 aa2.08□□□□□ -2.08
IFH1YLR223C STE5P32917 917 aa2.07□□□□□ -2.08
IFH1YLR223C JSN1P47135 1091 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
IFH1YLR223C PEX19Q07418 342 aa2.07□□□□□ -2.08
IFH1YLR223C KCS1Q12494 1050 aa2.07□□□□□ -2.08
IFH1YLR223C YKL151CP36059 337 aa2.07□□□□□ -2.08
IFH1YLR223C IRR1P40541 1150 aa2.07□□□□□ -2.08
IFH1YLR223C HUL4P40985 892 aa2.07□□□□□ -2.08
IFH1YLR223C SHR5P41912 237 aa2.07□□□□□ -2.08
IFH1YLR223C FMP25Q08023 583 aa2.07□□□□□ -2.08
IFH1YLR223C PRC1P00729 532 aa2.06□□□□□ -2.08
IFH1YLR223C NGG1P32494 702 aa2.06□□□□□ -2.08
IFH1YLR223C SHE9Q04172 456 aa2.06□□□□□ -2.08
IFH1YLR223C HSP60P19882 572 aaKnown RBP2.06□□□□□ -2.08
IFH1YLR223C EFT1P32324 842 aaKnown RBP2.06□□□□□ -2.08
IFH1YLR223C RPD3P32561 433 aa2.06□□□□□ -2.08
IFH1YLR223C MSS4P38994 779 aa2.06□□□□□ -2.08
IFH1YLR223C GUS1P46655 708 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
IFH1YLR223C ERP6P53198 216 aa2.06□□□□□ -2.08
IFH1YLR223C YOL098CQ12496 1037 aa2.06□□□□□ -2.08
IFH1YLR223C PMA1P05030 918 aaKnown RBP2.06□□□□□ -2.08
IFH1YLR223C TYE7P33122 291 aaPredicted RBP2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms