RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C RPB2P08518 1224 aaKnown RBP5.9□□□□□ -1.47
VPS1YKR001C PGS1P25578 521 aa5.9□□□□□ -1.47
VPS1YKR001C CDC60P26637 1090 aaKnown RBP5.9□□□□□ -1.47
VPS1YKR001C DPB3P27344 201 aa5.9□□□□□ -1.47
VPS1YKR001C ITR1P30605 584 aa5.9□□□□□ -1.47
VPS1YKR001C TPD3P31383 635 aa5.9□□□□□ -1.47
VPS1YKR001C SMY2P32909 740 aaKnown RBP5.9□□□□□ -1.47
VPS1YKR001C STO1P34160 861 aaKnown RBP5.9□□□□□ -1.47
VPS1YKR001C NUP120P35729 1037 aa5.9□□□□□ -1.47
VPS1YKR001C OCT1P35999 772 aa5.9□□□□□ -1.47
VPS1YKR001C YBL028CP38202 106 aa5.9□□□□□ -1.47
VPS1YKR001C RTS1P38903 757 aa5.9□□□□□ -1.47
VPS1YKR001C GCD14P46959 383 aaPredicted RBP5.9□□□□□ -1.47
VPS1YKR001C IML2P47031 731 aa5.9□□□□□ -1.47
VPS1YKR001C VTC4P47075 721 aa5.9□□□□□ -1.47
VPS1YKR001C RIM21P48565 533 aa5.9□□□□□ -1.47
VPS1YKR001C SHE10P53075 577 aa5.9□□□□□ -1.47
VPS1YKR001C FMP30Q02883 468 aa5.9□□□□□ -1.47
VPS1YKR001C ECM30Q06673 1274 aa5.9□□□□□ -1.47
VPS1YKR001C NOB1Q08444 459 aaKnown RBP5.9□□□□□ -1.47
VPS1YKR001C GNT1Q12096 491 aa5.9□□□□□ -1.47
VPS1YKR001C PMA1P05030 918 aaKnown RBP5.89□□□□□ -1.47
VPS1YKR001C SPS1P08458 490 aa5.89□□□□□ -1.47
VPS1YKR001C SEC14P24280 304 aaKnown RBP5.89□□□□□ -1.47
VPS1YKR001C OCA4P25366 362 aa5.89□□□□□ -1.47
VPS1YKR001C RPT3P33298 428 aaKnown RBP5.89□□□□□ -1.47
VPS1YKR001C CSE1P33307 960 aa5.89□□□□□ -1.47
VPS1YKR001C PXA2P34230 853 aa5.89□□□□□ -1.47
VPS1YKR001C WHI3P34761 661 aaKnown RBP5.89□□□□□ -1.47
VPS1YKR001C CCL1P37366 393 aa5.89□□□□□ -1.47
VPS1YKR001C OSH3P38713 996 aaKnown RBP5.89□□□□□ -1.47
VPS1YKR001C SAP1P39955 897 aaKnown RBP5.89□□□□□ -1.47
VPS1YKR001C FIR1P40020 876 aa5.89□□□□□ -1.47
VPS1YKR001C HEF3P53978 1044 aaKnown RBP5.89□□□□□ -1.47
VPS1YKR001C YMR102CQ03177 834 aa5.89□□□□□ -1.47
VPS1YKR001C VIP1Q06685 1146 aaKnown RBP5.89□□□□□ -1.47
VPS1YKR001C BRX1Q08235 291 aaKnown RBP5.89□□□□□ -1.47
VPS1YKR001C YOL098CQ12496 1037 aa5.89□□□□□ -1.47
VPS1YKR001C MEF1P25039 761 aa5.89□□□□□ -1.47
VPS1YKR001C ADP1P25371 1049 aa5.89□□□□□ -1.47
VPS1YKR001C ECM32P32644 1121 aaKnown RBP5.89□□□□□ -1.47
VPS1YKR001C BMH2P34730 273 aaKnown RBP5.89□□□□□ -1.47
VPS1YKR001C YIR014WP40570 242 aa5.89□□□□□ -1.47
VPS1YKR001C YGL140CP53120 1219 aa5.89□□□□□ -1.47
VPS1YKR001C ALG12P53730 551 aa5.89□□□□□ -1.47
VPS1YKR001C YMR018WQ04364 514 aa5.89□□□□□ -1.47
VPS1YKR001C DAL80P26343 269 aa5.88□□□□□ -1.47
VPS1YKR001C SLA1P32790 1244 aa5.88□□□□□ -1.47
VPS1YKR001C PTH2P34222 208 aa5.88□□□□□ -1.47
VPS1YKR001C MCD4P36051 919 aa5.88□□□□□ -1.47
VPS1YKR001C HSM3P38348 480 aa5.88□□□□□ -1.47
VPS1YKR001C YAP1801P38856 637 aa5.88□□□□□ -1.47
VPS1YKR001C RSM25P40496 264 aa5.88□□□□□ -1.47
VPS1YKR001C VTC2P43585 828 aa5.88□□□□□ -1.47
VPS1YKR001C YGR153WP48238 217 aa5.88□□□□□ -1.47
VPS1YKR001C LAP3Q01532 483 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
VPS1YKR001C ADE13Q05911 482 aaKnown RBP5.88□□□□□ -1.47
VPS1YKR001C YLR352WQ06479 807 aa5.88□□□□□ -1.47
VPS1YKR001C ICL2Q12031 575 aa5.88□□□□□ -1.47
VPS1YKR001C MCM3P24279 971 aaKnown RBP5.87□□□□□ -1.47
VPS1YKR001C PET112P33893 541 aa5.87□□□□□ -1.47
VPS1YKR001C VPS35P34110 944 aa5.87□□□□□ -1.47
VPS1YKR001C SET3P36124 751 aa5.87□□□□□ -1.47
VPS1YKR001C RRF1P38771 230 aa5.87□□□□□ -1.47
VPS1YKR001C ACA1P39970 489 aa5.87□□□□□ -1.47
VPS1YKR001C HXT10P43581 546 aa5.87□□□□□ -1.47
VPS1YKR001C MET12P46151 657 aa5.87□□□□□ -1.47
VPS1YKR001C YGR122WP53272 402 aa5.87□□□□□ -1.47
VPS1YKR001C SNF3P10870 884 aa5.87□□□□□ -1.47
VPS1YKR001C TRM1P15565 570 aaKnown RBP5.87□□□□□ -1.47
VPS1YKR001C YDJ1P25491 409 aaKnown RBP5.87□□□□□ -1.47
VPS1YKR001C URA1P28272 314 aaPredicted RBP5.87□□□□□ -1.47
VPS1YKR001C SFA1P32771 386 aa5.87□□□□□ -1.47
VPS1YKR001C ESL1P40456 1118 aa5.87□□□□□ -1.47
VPS1YKR001C YFL040WP43562 540 aa5.87□□□□□ -1.47
VPS1YKR001C ALF1P53904 254 aa5.87□□□□□ -1.47
VPS1YKR001C TFB3Q03290 321 aa5.87□□□□□ -1.47
VPS1YKR001C INP2Q03824 705 aa5.87□□□□□ -1.47
VPS1YKR001C KRE28Q04431 385 aa5.87□□□□□ -1.47
VPS1YKR001C YMR084WA2P2R3 262 aa5.86□□□□□ -1.47
VPS1YKR001C MPH2P0CD99 609 aa5.86□□□□□ -1.47
VPS1YKR001C KNS1P32350 737 aaPredicted RBP5.86□□□□□ -1.47
VPS1YKR001C YME2P32843 850 aa5.86□□□□□ -1.47
VPS1YKR001C LHS1P36016 881 aa5.86□□□□□ -1.47
VPS1YKR001C TIF5P38431 405 aaKnown RBP5.86□□□□□ -1.47
VPS1YKR001C GUA1P38625 525 aaKnown RBP5.86□□□□□ -1.47
VPS1YKR001C CCT3P39077 534 aaKnown RBP5.86□□□□□ -1.47
VPS1YKR001C VAB2P40003 282 aa5.86□□□□□ -1.47
VPS1YKR001C VID27P40157 782 aa5.86□□□□□ -1.47
VPS1YKR001C YJL070CP40361 888 aa5.86□□□□□ -1.47
VPS1YKR001C LYS14P40971 790 aa5.86□□□□□ -1.47
VPS1YKR001C ATP22P50273 684 aaPredicted RBP5.86□□□□□ -1.47
VPS1YKR001C SDA1P53313 767 aaKnown RBP5.86□□□□□ -1.47
VPS1YKR001C SPO1P53541 631 aa5.86□□□□□ -1.47
VPS1YKR001C STE20Q03497 939 aaKnown RBP5.86□□□□□ -1.47
VPS1YKR001C MCD1Q12158 566 aa5.86□□□□□ -1.47
VPS1YKR001C TAF3Q12297 353 aa5.86□□□□□ -1.47
VPS1YKR001C GAL1P04385 528 aa5.86□□□□□ -1.47
VPS1YKR001C STE6P12866 1290 aa5.86□□□□□ -1.47
VPS1YKR001C EUG1P32474 517 aa5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 66.7 ms