RNA–Protein interactions for RNA: YKL085W

MDH1, Transcript of Mitochondrial malate dehydrogenase, yeastyeast

Gene MDH1, Length 1,005 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH1YKL085W APE1P14904 514 aa7.38□□□□□ -1.23
MDH1YKL085W HCA4P20448 770 aaKnown RBP7.38□□□□□ -1.23
MDH1YKL085W CHL1P22516 861 aaPredicted RBP7.38□□□□□ -1.23
MDH1YKL085W PRP22P24384 1145 aaKnown RBP7.38□□□□□ -1.23
MDH1YKL085W SEC21P32074 935 aaKnown RBP7.38□□□□□ -1.23
MDH1YKL085W FBP26P32604 452 aa7.38□□□□□ -1.23
MDH1YKL085W TMT1P32643 299 aa7.38□□□□□ -1.23
MDH1YKL085W CSE2P33308 149 aa7.38□□□□□ -1.23
MDH1YKL085W ORC6P38826 435 aa7.38□□□□□ -1.23
MDH1YKL085W HXT13P39924 564 aa7.38□□□□□ -1.23
MDH1YKL085W AIM9P40053 627 aaKnown RBP7.38□□□□□ -1.23
MDH1YKL085W MMF1P40185 145 aaKnown RBP7.38□□□□□ -1.23
MDH1YKL085W MOB1P40484 314 aa7.38□□□□□ -1.23
MDH1YKL085W VID28P40547 921 aa7.38□□□□□ -1.23
MDH1YKL085W MAF1P41910 395 aa7.38□□□□□ -1.23
MDH1YKL085W EPL1P43572 832 aa7.38□□□□□ -1.23
MDH1YKL085W JJJ3P47138 172 aa7.38□□□□□ -1.23
MDH1YKL085W RET3P53600 189 aa7.38□□□□□ -1.23
MDH1YKL085W GCR2Q01722 534 aa7.38□□□□□ -1.23
MDH1YKL085W MFM1Q02783 413 aa7.38□□□□□ -1.23
MDH1YKL085W DOT1Q04089 582 aaKnown RBP7.38□□□□□ -1.23
MDH1YKL085W YOR022CQ12204 715 aa7.38□□□□□ -1.23
MDH1YKL085W ADE4P04046 510 aaKnown RBP7.37□□□□□ -1.23
MDH1YKL085W BIO2P32451 375 aa7.37□□□□□ -1.23
MDH1YKL085W SAS3P34218 831 aa7.37□□□□□ -1.23
MDH1YKL085W BMH2P34730 273 aaKnown RBP7.37□□□□□ -1.23
MDH1YKL085W SPO22P40511 975 aa7.37□□□□□ -1.23
MDH1YKL085W ALT2P52892 507 aa7.37□□□□□ -1.23
MDH1YKL085W DSE4P53753 1117 aa7.37□□□□□ -1.23
MDH1YKL085W SMC5Q08204 1093 aa7.37□□□□□ -1.23
MDH1YKL085W BEM2P39960 2167 aaKnown RBP7.37□□□□□ -1.23
MDH1YKL085W COX4P04037 155 aa7.36□□□□□ -1.23
MDH1YKL085W GLN3P18494 730 aa7.36□□□□□ -1.23
MDH1YKL085W PEX1P24004 1043 aa7.36□□□□□ -1.23
MDH1YKL085W SAP30P38429 201 aa7.36□□□□□ -1.23
MDH1YKL085W ARP1P38696 384 aa7.36□□□□□ -1.23
MDH1YKL085W PEX28P38848 579 aa7.36□□□□□ -1.23
MDH1YKL085W YDR344CQ05510 147 aa7.36□□□□□ -1.23
MDH1YKL085W YOL036WQ08206 761 aa7.36□□□□□ -1.23
MDH1YKL085W MRN1Q08925 612 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23 RIP-Chip
MDH1YKL085W RRD2Q12461 358 aa7.36□□□□□ -1.23
MDH1YKL085W CAN1P04817 590 aa7.35□□□□□ -1.23
MDH1YKL085W PEX2P32800 271 aa7.35□□□□□ -1.23
MDH1YKL085W CCL1P37366 393 aa7.35□□□□□ -1.23
MDH1YKL085W XDJ1P39102 459 aa7.35□□□□□ -1.23
MDH1YKL085W SLX8P40072 274 aa7.35□□□□□ -1.23
MDH1YKL085W ATG32P40458 529 aa7.35□□□□□ -1.23
MDH1YKL085W TFG1P41895 735 aaPredicted RBP7.35□□□□□ -1.23
MDH1YKL085W LAM5P43560 674 aa7.35□□□□□ -1.23
MDH1YKL085W TPO2P53283 614 aa7.35□□□□□ -1.23
MDH1YKL085W CSM3Q04659 317 aa7.35□□□□□ -1.23
MDH1YKL085W HCR1Q05775 265 aaKnown RBP7.35□□□□□ -1.23
MDH1YKL085W YLR257WQ06146 321 aaKnown RBP7.35□□□□□ -1.23
MDH1YKL085W MRI1Q06489 411 aaKnown RBP7.35□□□□□ -1.23
MDH1YKL085W VPS1P21576 704 aaKnown RBP7.34□□□□□ -1.23
MDH1YKL085W RSA4P25382 515 aaKnown RBP7.34□□□□□ -1.23
MDH1YKL085W RPT1P33299 467 aaKnown RBP7.34□□□□□ -1.23
MDH1YKL085W STS1P38637 319 aa7.34□□□□□ -1.23
MDH1YKL085W RIM4P38741 713 aa7.34□□□□□ -1.23
MDH1YKL085W RPN10P38886 268 aaKnown RBP7.34□□□□□ -1.23
MDH1YKL085W RGA1P39083 1007 aa7.34□□□□□ -1.23
MDH1YKL085W ULP2P40537 1034 aaPredicted RBP7.34□□□□□ -1.23
MDH1YKL085W AVT1P47082 602 aa7.34□□□□□ -1.23
MDH1YKL085W MNP1P53163 194 aaPredicted RBP7.34□□□□□ -1.23
MDH1YKL085W BIO5P53744 561 aaKnown RBP7.34□□□□□ -1.23
MDH1YKL085W SRD1P09007 221 aa7.33□□□□□ -1.24
MDH1YKL085W CDC6P09119 513 aa7.33□□□□□ -1.24
MDH1YKL085W MATALPHA2P0CY08 210 aa7.33□□□□□ -1.24
MDH1YKL085W HMLALPHA2P0CY09 210 aa7.33□□□□□ -1.24
MDH1YKL085W GSY1P23337 708 aa7.33□□□□□ -1.24
MDH1YKL085W PUP3P25451 205 aaKnown RBP7.33□□□□□ -1.24
MDH1YKL085W SIS2P36024 562 aa7.33□□□□□ -1.24
MDH1YKL085W OPY1P38271 328 aa7.33□□□□□ -1.24
MDH1YKL085W YEL023CP39992 682 aa7.33□□□□□ -1.24
MDH1YKL085W YMR1P47147 688 aaKnown RBP RIP-Chip data7.33□□□□□ -1.24not detected
MDH1YKL085W NAF1P53919 492 aaKnown RBP7.33□□□□□ -1.24
MDH1YKL085W PML39Q03760 334 aa7.33□□□□□ -1.24
MDH1YKL085W NOC3Q07896 663 aaPredicted RBP7.33□□□□□ -1.24
MDH1YKL085W MNL2Q12205 849 aa7.33□□□□□ -1.24
MDH1YKL085W PKH2Q12236 1081 aaKnown RBP7.33□□□□□ -1.24
MDH1YKL085W SCP160P06105 1222 aaKnown RBP RIP-Chip data7.32□□□□□ -1.24not detected
MDH1YKL085W THR4P16120 514 aaKnown RBP7.32□□□□□ -1.24
MDH1YKL085W DPH2P32461 534 aa7.32□□□□□ -1.24
MDH1YKL085W HXT5P38695 592 aa7.32□□□□□ -1.24
MDH1YKL085W STT3P39007 718 aaKnown RBP7.32□□□□□ -1.24
MDH1YKL085W TRS120Q04183 1289 aa7.32□□□□□ -1.24
MDH1YKL085W IES4Q08561 116 aa7.32□□□□□ -1.24
MDH1YKL085W SLK19Q08581 821 aaKnown RBP7.32□□□□□ -1.24
MDH1YKL085W AIM44Q99299 758 aa7.32□□□□□ -1.24
MDH1YKL085W TOM70P07213 617 aaKnown RBP7.31□□□□□ -1.24
MDH1YKL085W TRL1P09880 827 aaKnown RBP7.31□□□□□ -1.24
MDH1YKL085W MRX3P38172 270 aa7.31□□□□□ -1.24
MDH1YKL085W ERC1P38767 581 aa7.31□□□□□ -1.24
MDH1YKL085W YGL081WP53156 320 aa7.31□□□□□ -1.24
MDH1YKL085W PGA2P53903 129 aa7.31□□□□□ -1.24
MDH1YKL085W YNL146WP53906 100 aa7.31□□□□□ -1.24
MDH1YKL085W FUS2Q05670 677 aa7.31□□□□□ -1.24
MDH1YKL085W YLR407WQ06070 228 aa7.31□□□□□ -1.24
MDH1YKL085W SPE1P08432 466 aa7.3□□□□□ -1.24
MDH1YKL085W TCP1P12612 559 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms