RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAN1	YIR006C	HXT10	P43581	546 aa		4.96	□□□□□ -1.61
PAN1	YIR006C	RKM2	Q03942	479 aa		4.96	□□□□□ -1.61
PAN1	YIR006C	YMR018W	Q04364	514 aa		4.96	□□□□□ -1.61
PAN1	YIR006C	VIP1	Q06685	1146 aa	Known RBP	4.96	□□□□□ -1.61
PAN1	YIR006C	GRE2	Q12068	342 aa	Known RBP	4.96	□□□□□ -1.61
PAN1	YIR006C	SSE2	P32590	693 aa	Known RBP	4.96	□□□□□ -1.62
PAN1	YIR006C	TBS1	P38114	1094 aa		4.96	□□□□□ -1.62
PAN1	YIR006C	URB2	P47108	1174 aa		4.96	□□□□□ -1.62
PAN1	YIR006C	SHE4	P51534	789 aa		4.96	□□□□□ -1.62
PAN1	YIR006C	RGA2	Q06407	1009 aa		4.96	□□□□□ -1.62
PAN1	YIR006C	RAD61	Q99359	647 aa		4.96	□□□□□ -1.62
PAN1	YIR006C	CMD1	P06787	147 aa	Known RBP	4.96	□□□□□ -1.62
PAN1	YIR006C	SEC23	P15303	768 aa	Known RBP	4.96	□□□□□ -1.62
PAN1	YIR006C	PFK1	P16861	987 aa	Known RBP	4.96	□□□□□ -1.62
PAN1	YIR006C	YKR018C	P36114	725 aa		4.96	□□□□□ -1.62
PAN1	YIR006C	MCM6	P53091	1017 aa	Known RBP	4.96	□□□□□ -1.62
PAN1	YIR006C	YGR016W	P53209	190 aa		4.96	□□□□□ -1.62
PAN1	YIR006C	SMC5	Q08204	1093 aa		4.96	□□□□□ -1.62
PAN1	YIR006C	TAF10	Q12030	206 aa		4.96	□□□□□ -1.62
PAN1	YIR006C	REC107	P21651	314 aa		4.96	□□□□□ -1.62
PAN1	YIR006C	OAF3	P36023	863 aa		4.96	□□□□□ -1.62
PAN1	YIR006C	LAS1	P36146	502 aa	Predicted RBP	4.96	□□□□□ -1.62
PAN1	YIR006C	UBP9	P39967	754 aa		4.96	□□□□□ -1.62
PAN1	YIR006C	RLP7	P40693	322 aa	Known RBP	4.96	□□□□□ -1.62
PAN1	YIR006C	RRG1	Q12167	365 aa	Predicted RBP	4.96	□□□□□ -1.62
PAN1	YIR006C	GRX6	Q12438	231 aa		4.96	□□□□□ -1.62
PAN1	YIR006C	PDR1	P12383	1068 aa		4.95	□□□□□ -1.62
PAN1	YIR006C	KES1	P35844	434 aa	Known RBP	4.95	□□□□□ -1.62
PAN1	YIR006C	PCI8	P40512	444 aa		4.95	□□□□□ -1.62
PAN1	YIR006C	YAF9	P53930	226 aa		4.95	□□□□□ -1.62
PAN1	YIR006C	MSH6	Q03834	1242 aa		4.95	□□□□□ -1.62
PAN1	YIR006C	LAP2	Q10740	671 aa		4.95	□□□□□ -1.62
PAN1	YIR006C	YLL058W	Q12198	575 aa		4.95	□□□□□ -1.62
PAN1	YIR006C	MRPS28	P21771	286 aa		4.95	□□□□□ -1.62
PAN1	YIR006C	RPS5	P26783	225 aa	Known RBP	4.95	□□□□□ -1.62
PAN1	YIR006C	CST26	P38226	397 aa		4.95	□□□□□ -1.62
PAN1	YIR006C	GUP1	P53154	560 aa		4.95	□□□□□ -1.62
PAN1	YIR006C	SLU7	Q02775	382 aa	Known RBP	4.95	□□□□□ -1.62
PAN1	YIR006C	STE20	Q03497	939 aa	Known RBP	4.95	□□□□□ -1.62
PAN1	YIR006C	BUL2	Q03758	920 aa	Known RBP	4.95	□□□□□ -1.62
PAN1	YIR006C	SYF1	Q04048	859 aa	Predicted RBP	4.95	□□□□□ -1.62
PAN1	YIR006C	YSH1	Q06224	779 aa	Predicted RBP	4.95	□□□□□ -1.62
PAN1	YIR006C	DBP10	Q12389	995 aa	Known RBP	4.95	□□□□□ -1.62
PAN1	YIR006C	CAF20	P12962	161 aa	Known RBP	4.95	□□□□□ -1.62
PAN1	YIR006C	ILV6	P25605	309 aa	Known RBP	4.95	□□□□□ -1.62
PAN1	YIR006C	MCM4	P30665	933 aa	Known RBP	4.95	□□□□□ -1.62
PAN1	YIR006C	YME2	P32843	850 aa		4.95	□□□□□ -1.62
PAN1	YIR006C	SKG6	P32900	734 aa	Predicted RBP	4.95	□□□□□ -1.62
PAN1	YIR006C	VFA1	P40080	203 aa		4.95	□□□□□ -1.62
PAN1	YIR006C	ACK1	Q07622	623 aa	Predicted RBP	4.95	□□□□□ -1.62
PAN1	YIR006C	PMA1	P05030	918 aa	Known RBP	4.94	□□□□□ -1.62
PAN1	YIR006C	PIH1	P38768	344 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	SEC5	P89102	971 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	ADY4	Q05955	493 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	YOR059C	Q08448	450 aa	Known RBP	4.94	□□□□□ -1.62
PAN1	YIR006C	TUM1	Q08686	304 aa	Known RBP	4.94	□□□□□ -1.62
PAN1	YIR006C	DCS2	Q12123	353 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	PHO13	P19881	312 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	URA1	P28272	314 aa	Predicted RBP	4.94	□□□□□ -1.62
PAN1	YIR006C	BRF1	P29056	596 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	TRZ1	P36159	838 aa	Predicted RBP	4.94	□□□□□ -1.62
PAN1	YIR006C	RFT1	P38206	574 aa	Predicted RBP	4.94	□□□□□ -1.62
PAN1	YIR006C	ARB1	P40024	610 aa	Known RBP	4.94	□□□□□ -1.62
PAN1	YIR006C	FAR3	P46671	204 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	DRN1	P53255	507 aa	Known RBP	4.94	□□□□□ -1.62
PAN1	YIR006C	MDM1	Q01846	1127 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	YPR204W	Q08995	1032 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	SEC63	P14906	663 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	MSM1	P22438	575 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	CDC10	P25342	322 aa	Known RBP	4.94	□□□□□ -1.62
PAN1	YIR006C	SRO9	P25567	434 aa	Known RBP	4.94	□□□□□ -1.62
PAN1	YIR006C	MAK5	P38112	773 aa	Predicted RBP	4.94	□□□□□ -1.62
PAN1	YIR006C	FES1	P38260	290 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	TPS3	P38426	1054 aa	Known RBP	4.94	□□□□□ -1.62
PAN1	YIR006C	FET4	P40988	552 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	LSC2	P53312	427 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	RPN9	Q04062	393 aa	Known RBP	4.94	□□□□□ -1.62
PAN1	YIR006C	YLR455W	Q06188	304 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	TOS4	Q06266	489 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	FRA1	Q07825	749 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	SEC7	P11075	2009 aa	Known RBP	4.94	□□□□□ -1.62
PAN1	YIR006C	CDC6	P09119	513 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	NAM7	P30771	971 aa	Known RBP	4.94	□□□□□ -1.62
PAN1	YIR006C	NDI1	P32340	513 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	SUL1	P38359	859 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	SSZ1	P38788	538 aa	Known RBP	4.94	□□□□□ -1.62
PAN1	YIR006C	STT3	P39007	718 aa	Known RBP	4.94	□□□□□ -1.62
PAN1	YIR006C	FRT2	P39734	528 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	BUD16	P39988	312 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	EMW1	P42842	904 aa	Known RBP	4.94	□□□□□ -1.62
PAN1	YIR006C	TAN1	P53072	289 aa	Predicted RBP	4.94	□□□□□ -1.62
PAN1	YIR006C	YGR021W	P53212	290 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	ALR1	Q08269	859 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	IOC2	Q12072	812 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	HIF1	Q12373	385 aa		4.94	□□□□□ -1.62
PAN1	YIR006C	PMS1	P14242	873 aa		4.93	□□□□□ -1.62
PAN1	YIR006C	VAN1	P23642	535 aa		4.93	□□□□□ -1.62
PAN1	YIR006C	YME1	P32795	747 aa		4.93	□□□□□ -1.62
PAN1	YIR006C	TEL2	P53038	688 aa		4.93	□□□□□ -1.62
PAN1	YIR006C	DSL1	P53847	754 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms