RNA–Protein interactions for RNA: YGR213C

RTA1, Transcript of Protein involved in 7-aminocholesterol resistance, yeastyeast

Gene RTA1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTA1YGR213C YBR238CP38330 731 aaKnown RBP5.4□□□□□ -1.54
RTA1YGR213C HUL4P40985 892 aa5.4□□□□□ -1.54
RTA1YGR213C YKE2P52553 114 aa5.4□□□□□ -1.54
RTA1YGR213C LCD1Q04377 747 aa5.4□□□□□ -1.54
RTA1YGR213C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.4□□□□□ -1.54not detected
RTA1YGR213C GAL11P19659 1081 aa5.39□□□□□ -1.55
RTA1YGR213C GAS1P22146 559 aaKnown RBP5.39□□□□□ -1.55
RTA1YGR213C YBR284WP38150 797 aa5.39□□□□□ -1.55
RTA1YGR213C PBP2P38151 413 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
RTA1YGR213C LAM1P38851 1228 aa5.39□□□□□ -1.55
RTA1YGR213C YER158CP40095 573 aa5.39□□□□□ -1.55
RTA1YGR213C NIT1P40447 199 aa5.39□□□□□ -1.55
RTA1YGR213C AVT1P47082 602 aa5.39□□□□□ -1.55
RTA1YGR213C SFB2P53953 876 aa5.39□□□□□ -1.55
RTA1YGR213C PLB2Q03674 706 aa5.39□□□□□ -1.55
RTA1YGR213C FPR4Q06205 392 aaPredicted RBP5.39□□□□□ -1.55
RTA1YGR213C YDL124WQ07551 312 aaKnown RBP5.39□□□□□ -1.55
RTA1YGR213C YPR071WQ12346 211 aa5.39□□□□□ -1.55
RTA1YGR213C TOP3P13099 656 aa5.38□□□□□ -1.55
RTA1YGR213C MSD1P15179 658 aaKnown RBP5.38□□□□□ -1.55
RTA1YGR213C PET10P36139 283 aa5.38□□□□□ -1.55
RTA1YGR213C BET3P36149 193 aa5.38□□□□□ -1.55
RTA1YGR213C ERT1P38140 529 aa5.38□□□□□ -1.55
RTA1YGR213C CHZ1P40019 153 aaPredicted RBP5.38□□□□□ -1.55
RTA1YGR213C TOK1P40310 691 aa5.38□□□□□ -1.55
RTA1YGR213C RTA1P53047 317 aa5.38□□□□□ -1.55
RTA1YGR213C YDR132CQ03900 495 aa5.38□□□□□ -1.55
RTA1YGR213C YOR352WQ08816 343 aa5.38□□□□□ -1.55
RTA1YGR213C CDC48P25694 835 aaKnown RBP5.37□□□□□ -1.55
RTA1YGR213C MEF2P39677 819 aa5.37□□□□□ -1.55
RTA1YGR213C CCM1P48237 864 aaPredicted RBP5.37□□□□□ -1.55
RTA1YGR213C PRP43P53131 767 aaKnown RBP5.37□□□□□ -1.55
RTA1YGR213C ROT1Q03691 256 aa5.37□□□□□ -1.55
RTA1YGR213C RNQ1P25367 405 aa5.36□□□□□ -1.55
RTA1YGR213C DOM34P33309 386 aa5.36□□□□□ -1.55
RTA1YGR213C REC104P33323 182 aa5.36□□□□□ -1.55
RTA1YGR213C AIM3P38266 947 aaKnown RBP5.36□□□□□ -1.55
RTA1YGR213C ZRG8P40021 1076 aa5.36□□□□□ -1.55
RTA1YGR213C MND2P40577 368 aa5.36□□□□□ -1.55
RTA1YGR213C UBP6P43593 499 aaKnown RBP5.36□□□□□ -1.55
RTA1YGR213C DUS4Q06063 367 aa5.36□□□□□ -1.55
RTA1YGR213C CDA1Q06702 301 aa5.36□□□□□ -1.55
RTA1YGR213C SOD2P00447 233 aa5.35□□□□□ -1.55
RTA1YGR213C CIT2P08679 460 aa5.35□□□□□ -1.55
RTA1YGR213C YRB30P53107 440 aaPredicted RBP5.35□□□□□ -1.55
RTA1YGR213C YGR012WP53206 393 aa5.35□□□□□ -1.55
RTA1YGR213C PBP1P53297 722 aaKnown RBP5.35□□□□□ -1.55
RTA1YGR213C GCN5Q03330 439 aa5.35□□□□□ -1.55
RTA1YGR213C YPR196WQ06595 470 aa5.35□□□□□ -1.55
RTA1YGR213C YPL277CQ08989 487 aa5.35□□□□□ -1.55
RTA1YGR213C RPS13P05756 151 aaKnown RBP5.34□□□□□ -1.55
RTA1YGR213C CDC6P09119 513 aa5.34□□□□□ -1.55
RTA1YGR213C HSF1P10961 833 aa5.34□□□□□ -1.55
RTA1YGR213C PRP6P19735 899 aaPredicted RBP5.34□□□□□ -1.55
RTA1YGR213C TIM23P32897 222 aa5.34□□□□□ -1.55
RTA1YGR213C SRP101P32916 621 aa5.34□□□□□ -1.55
RTA1YGR213C RIM8P53179 542 aa5.34□□□□□ -1.55
RTA1YGR213C TOM70P07213 617 aaKnown RBP5.33□□□□□ -1.56
RTA1YGR213C ERR1P0CX10 437 aa5.33□□□□□ -1.56
RTA1YGR213C ERR2P0CX11 437 aa5.33□□□□□ -1.56
RTA1YGR213C ENA1P13587 1091 aa5.33□□□□□ -1.56
RTA1YGR213C THI80P35202 319 aa5.33□□□□□ -1.56
RTA1YGR213C NUP82P40368 713 aa5.33□□□□□ -1.56
RTA1YGR213C OSW7P43611 510 aa5.33□□□□□ -1.56
RTA1YGR213C ENA2Q01896 1091 aa5.33□□□□□ -1.56
RTA1YGR213C ADY3Q07732 790 aa5.33□□□□□ -1.56
RTA1YGR213C TPO1Q07824 586 aa5.33□□□□□ -1.56
RTA1YGR213C ENA5Q12691 1091 aa5.33□□□□□ -1.56
RTA1YGR213C NOP2P40991 618 aaKnown RBP5.32□□□□□ -1.56
RTA1YGR213C GTF1P53260 183 aaPredicted RBP5.32□□□□□ -1.56
RTA1YGR213C VPS62P53285 467 aa5.32□□□□□ -1.56
RTA1YGR213C RXT3Q07458 294 aa5.32□□□□□ -1.56
RTA1YGR213C GPB1Q08886 897 aa5.32□□□□□ -1.56
RTA1YGR213C ENV7Q12003 364 aa5.32□□□□□ -1.56
RTA1YGR213C NOT3P06102 836 aaKnown RBP5.31□□□□□ -1.56
RTA1YGR213C CDC20P26309 610 aa5.31□□□□□ -1.56
RTA1YGR213C POA1P38218 177 aa5.31□□□□□ -1.56
RTA1YGR213C SPT20P50875 604 aa5.31□□□□□ -1.56
RTA1YGR213C RAI1P53063 387 aaKnown RBP5.31□□□□□ -1.56
RTA1YGR213C HMI1Q12039 706 aa5.31□□□□□ -1.56
RTA1YGR213C SPE1P08432 466 aa5.3□□□□□ -1.56
RTA1YGR213C PHO8P11491 566 aa5.3□□□□□ -1.56
RTA1YGR213C EMC1P25574 760 aa5.3□□□□□ -1.56
RTA1YGR213C GDH3P39708 457 aa5.3□□□□□ -1.56
RTA1YGR213C IRC24P40580 263 aa5.3□□□□□ -1.56
RTA1YGR213C ALG2P43636 503 aa5.3□□□□□ -1.56
RTA1YGR213C MET12P46151 657 aa5.3□□□□□ -1.56
RTA1YGR213C GCV2P49095 1034 aa5.3□□□□□ -1.56
RTA1YGR213C PSP2P50109 593 aaKnown RBP5.3□□□□□ -1.56
RTA1YGR213C ACK1Q07622 623 aaPredicted RBP5.3□□□□□ -1.56
RTA1YGR213C YLR125WQ12138 136 aa5.3□□□□□ -1.56
RTA1YGR213C STE13P33894 931 aa5.29□□□□□ -1.56
RTA1YGR213C TOD6P34219 525 aa5.29□□□□□ -1.56
RTA1YGR213C EMC3P36039 253 aa5.29□□□□□ -1.56
RTA1YGR213C YGR283CP53336 341 aaPredicted RBP5.29□□□□□ -1.56
RTA1YGR213C RPP2AP05319 106 aaKnown RBP5.28□□□□□ -1.56
RTA1YGR213C HIS5P07172 385 aa5.28□□□□□ -1.56
RTA1YGR213C MPH2P0CD99 609 aa5.28□□□□□ -1.56
RTA1YGR213C PRE10P21242 288 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
RTA1YGR213C ATG19P35193 415 aa5.28□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms