RNA–Protein interactions for RNA: YGR049W

SCM4, Transcript of Mitochondrial outer membrane protein of unknown function, yeast

Gene SCM4, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCM4	YGR049W	HBN1	Q96VH4	193 aa		5.07	□□□□□ -1.6
SCM4	YGR049W	RPS13	P05756	151 aa	Known RBP	5.06	□□□□□ -1.6
SCM4	YGR049W	MSD1	P15179	658 aa	Known RBP	5.06	□□□□□ -1.6
SCM4	YGR049W	PRP9	P19736	530 aa	Known RBP	5.06	□□□□□ -1.6
SCM4	YGR049W	BET3	P36149	193 aa		5.06	□□□□□ -1.6
SCM4	YGR049W	ECM21	P38167	1117 aa	Known RBP	5.06	□□□□□ -1.6
SCM4	YGR049W	RSP5	P39940	809 aa	Known RBP	5.06	□□□□□ -1.6
SCM4	YGR049W	RTA1	P53047	317 aa		5.06	□□□□□ -1.6
SCM4	YGR049W	ERP6	P53198	216 aa		5.06	□□□□□ -1.6
SCM4	YGR049W	DUS4	Q06063	367 aa		5.06	□□□□□ -1.6
SCM4	YGR049W	SPO75	Q07798	868 aa		5.06	□□□□□ -1.6
SCM4	YGR049W	OSH2	Q12451	1283 aa		5.06	□□□□□ -1.6
SCM4	YGR049W	CDC6	P09119	513 aa		5.05	□□□□□ -1.6
SCM4	YGR049W	ENA1	P13587	1091 aa		5.05	□□□□□ -1.6
SCM4	YGR049W	HSP60	P19882	572 aa	Known RBP	5.05	□□□□□ -1.6
SCM4	YGR049W	FUN30	P31380	1131 aa		5.05	□□□□□ -1.6
SCM4	YGR049W	YER158C	P40095	573 aa		5.05	□□□□□ -1.6
SCM4	YGR049W	TOK1	P40310	691 aa		5.05	□□□□□ -1.6
SCM4	YGR049W	YJL049W	P47048	450 aa		5.05	□□□□□ -1.6
SCM4	YGR049W	GYP7	P48365	746 aa		5.05	□□□□□ -1.6
SCM4	YGR049W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.05	□□□□□ -1.6	RIP-Chip
SCM4	YGR049W	ENA2	Q01896	1091 aa		5.05	□□□□□ -1.6
SCM4	YGR049W	GCN5	Q03330	439 aa		5.05	□□□□□ -1.6
SCM4	YGR049W	TAF8	Q03750	510 aa		5.05	□□□□□ -1.6
SCM4	YGR049W	CDA1	Q06702	301 aa		5.05	□□□□□ -1.6
SCM4	YGR049W	ENA5	Q12691	1091 aa		5.05	□□□□□ -1.6
SCM4	YGR049W	SIT1	P39980	628 aa		5.04	□□□□□ -1.6
SCM4	YGR049W	ZRG8	P40021	1076 aa		5.04	□□□□□ -1.6
SCM4	YGR049W	MND2	P40577	368 aa		5.04	□□□□□ -1.6
SCM4	YGR049W	SPT20	P50875	604 aa		5.04	□□□□□ -1.6
SCM4	YGR049W	ENV11	P53246	860 aa		5.04	□□□□□ -1.6
SCM4	YGR049W	GSF2	Q04697	403 aa	Known RBP	5.04	□□□□□ -1.6
SCM4	YGR049W	PPM2	Q08282	695 aa		5.04	□□□□□ -1.6
SCM4	YGR049W	ERR1	P0CX10	437 aa		5.03	□□□□□ -1.6
SCM4	YGR049W	ERR2	P0CX11	437 aa		5.03	□□□□□ -1.6
SCM4	YGR049W	SRP40	P32583	406 aa	Predicted RBP	5.03	□□□□□ -1.6
SCM4	YGR049W	YKL091C	P33324	310 aa	Known RBP	5.03	□□□□□ -1.6
SCM4	YGR049W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
SCM4	YGR049W	TPO1	Q07824	586 aa		5.03	□□□□□ -1.6
SCM4	YGR049W	YLR358C	O13565	187 aa		5.02	□□□□□ -1.61
SCM4	YGR049W	ADE8	P04161	214 aa		5.02	□□□□□ -1.61
SCM4	YGR049W	CAN1	P04817	590 aa		5.02	□□□□□ -1.61
SCM4	YGR049W	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.02	□□□□□ -1.61	not detected
SCM4	YGR049W	EMC1	P25574	760 aa		5.02	□□□□□ -1.61
SCM4	YGR049W	CLU1	Q03690	1277 aa	Known RBP	5.02	□□□□□ -1.61
SCM4	YGR049W	YAP6	Q03935	383 aa		5.02	□□□□□ -1.61
SCM4	YGR049W	YPR196W	Q06595	470 aa		5.02	□□□□□ -1.61
SCM4	YGR049W	WHI4	Q07655	649 aa	Known RBP	5.02	□□□□□ -1.61
SCM4	YGR049W	YOR352W	Q08816	343 aa		5.02	□□□□□ -1.61
SCM4	YGR049W	GPB1	Q08886	897 aa		5.02	□□□□□ -1.61
SCM4	YGR049W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.01	□□□□□ -1.61	not detected
SCM4	YGR049W	CDC20	P26309	610 aa		5.01	□□□□□ -1.61
SCM4	YGR049W	PET10	P36139	283 aa		5.01	□□□□□ -1.61
SCM4	YGR049W	YKE2	P52553	114 aa		5.01	□□□□□ -1.61
SCM4	YGR049W	YGR012W	P53206	393 aa		5.01	□□□□□ -1.61
SCM4	YGR049W	LCD1	Q04377	747 aa		5.01	□□□□□ -1.61
SCM4	YGR049W	HMI1	Q12039	706 aa		5.01	□□□□□ -1.61
SCM4	YGR049W	CDC48	P25694	835 aa	Known RBP	5	□□□□□ -1.61
SCM4	YGR049W	TIM23	P32897	222 aa		5	□□□□□ -1.61
SCM4	YGR049W	SHM2	P37291	469 aa	Known RBP	5	□□□□□ -1.61
SCM4	YGR049W	BUD6	P41697	788 aa		5	□□□□□ -1.61
SCM4	YGR049W	VPS62	P53285	467 aa		5	□□□□□ -1.61
SCM4	YGR049W	GIS1	Q03833	894 aa		5	□□□□□ -1.61
SCM4	YGR049W	ADY3	Q07732	790 aa		5	□□□□□ -1.61
SCM4	YGR049W	NOT3	P06102	836 aa	Known RBP	4.99	□□□□□ -1.61
SCM4	YGR049W	RPD3	P32561	433 aa		4.99	□□□□□ -1.61
SCM4	YGR049W	YKR078W	P36158	585 aa	Known RBP	4.99	□□□□□ -1.61
SCM4	YGR049W	TPO2	P53283	614 aa		4.99	□□□□□ -1.61
SCM4	YGR049W	TOM70	P07213	617 aa	Known RBP	4.98	□□□□□ -1.61
SCM4	YGR049W	SPE1	P08432	466 aa		4.98	□□□□□ -1.61
SCM4	YGR049W	CIT2	P08679	460 aa		4.98	□□□□□ -1.61
SCM4	YGR049W	CDC11	P32458	415 aa		4.98	□□□□□ -1.61
SCM4	YGR049W	REC104	P33323	182 aa		4.98	□□□□□ -1.61
SCM4	YGR049W	POA1	P38218	177 aa		4.98	□□□□□ -1.61
SCM4	YGR049W	YBR238C	P38330	731 aa	Known RBP	4.98	□□□□□ -1.61
SCM4	YGR049W	HUL4	P40985	892 aa		4.98	□□□□□ -1.61
SCM4	YGR049W	UBP6	P43593	499 aa	Known RBP	4.98	□□□□□ -1.61
SCM4	YGR049W	RPN4	Q03465	531 aa		4.98	□□□□□ -1.61
SCM4	YGR049W	SSL1	Q04673	461 aa	Predicted RBP	4.98	□□□□□ -1.61
SCM4	YGR049W	RXT3	Q07458	294 aa		4.98	□□□□□ -1.61
SCM4	YGR049W	YDL124W	Q07551	312 aa	Known RBP	4.98	□□□□□ -1.61
SCM4	YGR049W	ACK1	Q07622	623 aa	Predicted RBP	4.98	□□□□□ -1.61
SCM4	YGR049W	YTA7	P40340	1379 aa		4.97	□□□□□ -1.61
SCM4	YGR049W	HSF1	P10961	833 aa		4.97	□□□□□ -1.61
SCM4	YGR049W	GYP8	P43570	497 aa		4.97	□□□□□ -1.61
SCM4	YGR049W	TMA10	Q06177	86 aa		4.97	□□□□□ -1.61
SCM4	YGR049W	ENV7	Q12003	364 aa		4.97	□□□□□ -1.61
SCM4	YGR049W	GAL11	P19659	1081 aa		4.96	□□□□□ -1.62
SCM4	YGR049W	CTS1	P29029	562 aa		4.96	□□□□□ -1.62
SCM4	YGR049W	LST4	P34239	828 aa		4.96	□□□□□ -1.62
SCM4	YGR049W	MET12	P46151	657 aa		4.96	□□□□□ -1.62
SCM4	YGR049W	CCM1	P48237	864 aa	Predicted RBP	4.96	□□□□□ -1.62
SCM4	YGR049W	RAI1	P53063	387 aa	Known RBP	4.96	□□□□□ -1.62
SCM4	YGR049W	PBP1	P53297	722 aa	Known RBP	4.96	□□□□□ -1.62
SCM4	YGR049W	YLR224W	Q05947	369 aa		4.96	□□□□□ -1.62
SCM4	YGR049W	YOR131C	Q12486	218 aa		4.96	□□□□□ -1.62
SCM4	YGR049W	TUB2	P02557	457 aa	Known RBP	4.95	□□□□□ -1.62
SCM4	YGR049W	DOM34	P33309	386 aa		4.95	□□□□□ -1.62
SCM4	YGR049W	STE13	P33894	931 aa		4.95	□□□□□ -1.62
SCM4	YGR049W	MAL11	P53048	616 aa		4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms