RNA–Protein interactions for RNA: YGL238W

CSE1, Transcript of Nuclear envelope protein that mediates the nuclear export of Srp1p, yeastyeast

Gene CSE1, Length 2,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSE1YGL238W UBS1P38290 277 aa1.13□□□□□ -2.23
CSE1YGL238W YBR238CP38330 731 aaKnown RBP1.13□□□□□ -2.23
CSE1YGL238W RNT1Q02555 471 aa1.13□□□□□ -2.23
CSE1YGL238W COQ11Q05892 277 aa1.13□□□□□ -2.23
CSE1YGL238W GNT1Q12096 491 aa1.13□□□□□ -2.23
CSE1YGL238W TUB3P09734 445 aaKnown RBP1.12□□□□□ -2.23
CSE1YGL238W TMT1P32643 299 aa1.12□□□□□ -2.23
CSE1YGL238W SEC8P32855 1065 aa1.12□□□□□ -2.23
CSE1YGL238W RPT1P33299 467 aaKnown RBP1.12□□□□□ -2.23
CSE1YGL238W YGR012WP53206 393 aa1.12□□□□□ -2.23
CSE1YGL238W HRQ1Q05549 1077 aa1.12□□□□□ -2.23
CSE1YGL238W MCD1Q12158 566 aa1.12□□□□□ -2.23
CSE1YGL238W PPR1P07272 904 aaPredicted RBP1.12□□□□□ -2.23
CSE1YGL238W ALG7P07286 448 aa1.12□□□□□ -2.23
CSE1YGL238W SPE1P08432 466 aa1.12□□□□□ -2.23
CSE1YGL238W MET10P39692 1035 aa1.12□□□□□ -2.23
CSE1YGL238W SRT1Q03175 343 aa1.12□□□□□ -2.23
CSE1YGL238W SPP382Q06411 708 aaPredicted RBP1.12□□□□□ -2.23
CSE1YGL238W WHI4Q07655 649 aaKnown RBP1.12□□□□□ -2.23
CSE1YGL238W MDM38Q08179 573 aa1.12□□□□□ -2.23
CSE1YGL238W OSW2Q12202 724 aa1.12□□□□□ -2.23
CSE1YGL238W GPR1Q12361 961 aa1.12□□□□□ -2.23
CSE1YGL238W ATG19P35193 415 aa1.11□□□□□ -2.23
CSE1YGL238W IPL1P38991 367 aa1.11□□□□□ -2.23
CSE1YGL238W FYV10P40492 516 aa1.11□□□□□ -2.23
CSE1YGL238W SDS3P40505 327 aa1.11□□□□□ -2.23
CSE1YGL238W IMO32P53219 342 aa1.11□□□□□ -2.23
CSE1YGL238W YGR053CP53234 283 aa1.11□□□□□ -2.23
CSE1YGL238W MRPS35P53292 345 aa1.11□□□□□ -2.23
CSE1YGL238W YNL162W-AQ3E7A8 72 aa1.11□□□□□ -2.23
CSE1YGL238W PRP4P20053 465 aaKnown RBP1.11□□□□□ -2.23
CSE1YGL238W CAD1P24813 409 aaKnown RBP1.11□□□□□ -2.23
CSE1YGL238W BNR1P40450 1375 aa1.11□□□□□ -2.23
CSE1YGL238W TRP2P00899 507 aaKnown RBP1.1□□□□□ -2.23
CSE1YGL238W TUB1P09733 447 aaKnown RBP1.1□□□□□ -2.23
CSE1YGL238W HSF1P10961 833 aa1.1□□□□□ -2.23
CSE1YGL238W CCC2P38995 1004 aa1.1□□□□□ -2.23
CSE1YGL238W MRPS18P42847 217 aa1.1□□□□□ -2.23
CSE1YGL238W PSP2P50109 593 aaKnown RBP1.1□□□□□ -2.23
CSE1YGL238W SEC5P89102 971 aa1.1□□□□□ -2.23
CSE1YGL238W HBT1Q07653 1046 aaKnown RBP1.1□□□□□ -2.23
CSE1YGL238W MRH1Q12117 320 aaPredicted RBP1.1□□□□□ -2.23
CSE1YGL238W ILV6P25605 309 aaKnown RBP1.1□□□□□ -2.23
CSE1YGL238W CDC12P32468 407 aaKnown RBP1.1□□□□□ -2.23
CSE1YGL238W PPZ2P33329 710 aa1.1□□□□□ -2.23
CSE1YGL238W RIX1P38883 763 aaPredicted RBP1.1□□□□□ -2.23
CSE1YGL238W GLO1P50107 326 aa1.1□□□□□ -2.23
CSE1YGL238W SPR28Q04921 423 aa1.1□□□□□ -2.23
CSE1YGL238W FUN30P31380 1131 aa1.1□□□□□ -2.23
CSE1YGL238W GFA1P14742 717 aaKnown RBP1.09□□□□□ -2.23
CSE1YGL238W SRP101P32916 621 aa1.09□□□□□ -2.23
CSE1YGL238W CTF13P35203 478 aa1.09□□□□□ -2.23
CSE1YGL238W YBR053CP38235 358 aa1.09□□□□□ -2.23
CSE1YGL238W TSL1P38427 1098 aaKnown RBP1.09□□□□□ -2.23
CSE1YGL238W RPS26AP39938 119 aaKnown RBP1.09□□□□□ -2.23
CSE1YGL238W RPS26BP39939 119 aaKnown RBP1.09□□□□□ -2.23
CSE1YGL238W ESC2Q06340 456 aa1.09□□□□□ -2.23
CSE1YGL238W SPA2P23201 1466 aaKnown RBP1.09□□□□□ -2.24
CSE1YGL238W CDC34P14682 295 aa1.09□□□□□ -2.24
CSE1YGL238W NPP1P25353 742 aa1.09□□□□□ -2.24
CSE1YGL238W SEC21P32074 935 aaKnown RBP1.09□□□□□ -2.24
CSE1YGL238W PPS1P38148 807 aa1.09□□□□□ -2.24
CSE1YGL238W TDP1P38319 544 aa1.09□□□□□ -2.24
CSE1YGL238W YHL017WP38745 532 aa1.09□□□□□ -2.24
CSE1YGL238W GGA2P38817 585 aaKnown RBP1.09□□□□□ -2.24
CSE1YGL238W STM1P39015 273 aaKnown RBP1.09□□□□□ -2.24
CSE1YGL238W TAH11P47112 604 aa1.09□□□□□ -2.24
CSE1YGL238W NAB6Q03735 1134 aaKnown RBP RIP-Chip data1.09□□□□□ -2.24not detected
CSE1YGL238W THI7Q05998 598 aa1.09□□□□□ -2.24
CSE1YGL238W MCM7P38132 845 aa1.08□□□□□ -2.24
CSE1YGL238W DAS1P47005 663 aa1.08□□□□□ -2.24
CSE1YGL238W MRL1Q06815 381 aa1.08□□□□□ -2.24
CSE1YGL238W RTT10Q08924 1013 aa1.08□□□□□ -2.24
CSE1YGL238W HCA4P20448 770 aaKnown RBP1.08□□□□□ -2.24
CSE1YGL238W YUR1P26725 428 aa1.08□□□□□ -2.24
CSE1YGL238W MCM2P29469 868 aa1.08□□□□□ -2.24
CSE1YGL238W VPS73P53142 486 aaKnown RBP1.08□□□□□ -2.24
CSE1YGL238W SFB2P53953 876 aa1.08□□□□□ -2.24
CSE1YGL238W ARO10Q06408 635 aa1.08□□□□□ -2.24
CSE1YGL238W FRE5Q08908 694 aa1.08□□□□□ -2.24
CSE1YGL238W SED4P25365 1065 aa1.07□□□□□ -2.24
CSE1YGL238W LYP1P32487 611 aa1.07□□□□□ -2.24
CSE1YGL238W CTF8P38877 133 aa1.07□□□□□ -2.24
CSE1YGL238W RKM4Q12504 494 aa1.07□□□□□ -2.24
CSE1YGL238W EMP70P32802 667 aa1.07□□□□□ -2.24
CSE1YGL238W YKR078WP36158 585 aaKnown RBP1.07□□□□□ -2.24
CSE1YGL238W GUS1P46655 708 aaKnown RBP RIP-Chip data1.07□□□□□ -2.24not detected
CSE1YGL238W GYP7P48365 746 aa1.07□□□□□ -2.24
CSE1YGL238W SCS3P53012 380 aa1.07□□□□□ -2.24
CSE1YGL238W ADY4Q05955 493 aa1.07□□□□□ -2.24
CSE1YGL238W CIR2Q08822 631 aa1.07□□□□□ -2.24
CSE1YGL238W CDC43P18898 376 aa1.06□□□□□ -2.24
CSE1YGL238W RAD27P26793 382 aa1.06□□□□□ -2.24
CSE1YGL238W SIT1P39980 628 aa1.06□□□□□ -2.24
CSE1YGL238W YIL166CP40445 542 aa1.06□□□□□ -2.24
CSE1YGL238W TYW3P53177 273 aa1.06□□□□□ -2.24
CSE1YGL238W SSL1Q04673 461 aaPredicted RBP1.06□□□□□ -2.24
CSE1YGL238W NOP8Q08287 484 aaPredicted RBP1.06□□□□□ -2.24
CSE1YGL238W GEP3Q08622 556 aa1.06□□□□□ -2.24
CSE1YGL238W TAF3Q12297 353 aa1.06□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 51.4 ms