RNA–Protein interactions for RNA: YGL029W

CGR1, Protein involved in nucleolar integrity and processing of pre-rRNA, yeast

Gene CGR1, Length 363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CGR1	YGL029W	PEA2	P40091	420 aa		4.2	□□□□□ -1.74
CGR1	YGL029W	ATG16	Q03818	150 aa		4.2	□□□□□ -1.74
CGR1	YGL029W	MTQ2	Q03920	221 aa	Predicted RBP	4.2	□□□□□ -1.74
CGR1	YGL029W	SRD1	P09007	221 aa		4.19	□□□□□ -1.74
CGR1	YGL029W	SST2	P11972	698 aa	Known RBP	4.19	□□□□□ -1.74
CGR1	YGL029W	RAD53	P22216	821 aa		4.19	□□□□□ -1.74
CGR1	YGL029W	GSY1	P23337	708 aa		4.19	□□□□□ -1.74
CGR1	YGL029W	PCL2	P25693	308 aa		4.19	□□□□□ -1.74
CGR1	YGL029W	DOM34	P33309	386 aa		4.19	□□□□□ -1.74
CGR1	YGL029W	SPC29	P33419	253 aa		4.19	□□□□□ -1.74
CGR1	YGL029W	YEL1	P34225	687 aa		4.19	□□□□□ -1.74
CGR1	YGL029W	TRZ1	P36159	838 aa	Predicted RBP	4.19	□□□□□ -1.74
CGR1	YGL029W	TYS1	P36421	394 aa	Known RBP	4.19	□□□□□ -1.74
CGR1	YGL029W	ALG3	P38179	458 aa		4.19	□□□□□ -1.74
CGR1	YGL029W	ALG2	P43636	503 aa		4.19	□□□□□ -1.74
CGR1	YGL029W	TY4A-J	P47023	414 aa		4.19	□□□□□ -1.74
CGR1	YGL029W	PEX14	P53112	341 aa		4.19	□□□□□ -1.74
CGR1	YGL029W	GUP1	P53154	560 aa		4.19	□□□□□ -1.74
CGR1	YGL029W	YGR021W	P53212	290 aa		4.19	□□□□□ -1.74
CGR1	YGL029W	UBX4	P54730	416 aa		4.19	□□□□□ -1.74
CGR1	YGL029W	VMS1	Q04311	632 aa	Known RBP	4.19	□□□□□ -1.74
CGR1	YGL029W	YDR306C	Q06640	478 aa		4.19	□□□□□ -1.74
CGR1	YGL029W	PGI1	P12709	554 aa	Known RBP	4.18	□□□□□ -1.74
CGR1	YGL029W	RPA135	P22138	1203 aa	Known RBP	4.18	□□□□□ -1.74
CGR1	YGL029W	DPB3	P27344	201 aa		4.18	□□□□□ -1.74
CGR1	YGL029W	MLS1	P30952	554 aa		4.18	□□□□□ -1.74
CGR1	YGL029W	CDC12	P32468	407 aa	Known RBP	4.18	□□□□□ -1.74
CGR1	YGL029W	ERT1	P38140	529 aa		4.18	□□□□□ -1.74
CGR1	YGL029W	PNT1	P38969	423 aa		4.18	□□□□□ -1.74
CGR1	YGL029W	YJR096W	P47137	282 aa		4.18	□□□□□ -1.74
CGR1	YGL029W	MET13	P53128	600 aa		4.18	□□□□□ -1.74
CGR1	YGL029W	HFD1	Q04458	532 aa		4.18	□□□□□ -1.74
CGR1	YGL029W	URN1	Q06525	465 aa	Known RBP	4.18	□□□□□ -1.74
CGR1	YGL029W	TRE2	Q08693	809 aa		4.18	□□□□□ -1.74
CGR1	YGL029W	MPD2	Q99316	277 aa		4.18	□□□□□ -1.74
CGR1	YGL029W	TFC4	P33339	1025 aa		4.17	□□□□□ -1.74
CGR1	YGL029W	FLR1	P38124	548 aa		4.17	□□□□□ -1.74
CGR1	YGL029W	RRP8	P38961	392 aa	Known RBP	4.17	□□□□□ -1.74
CGR1	YGL029W	LEM3	P42838	414 aa		4.17	□□□□□ -1.74
CGR1	YGL029W	DAS1	P47005	663 aa		4.17	□□□□□ -1.74
CGR1	YGL029W	DUS3	Q06053	668 aa	Known RBP	4.17	□□□□□ -1.74
CGR1	YGL029W	ELG1	Q12050	791 aa		4.17	□□□□□ -1.74
CGR1	YGL029W	YPR071W	Q12346	211 aa		4.17	□□□□□ -1.74
CGR1	YGL029W	YEF3	P16521	1044 aa	Known RBP	4.16	□□□□□ -1.74
CGR1	YGL029W	ERS1	P17261	260 aa		4.16	□□□□□ -1.74
CGR1	YGL029W	AAR2	P32357	355 aa	Predicted RBP	4.16	□□□□□ -1.74
CGR1	YGL029W	HSP78	P33416	811 aa		4.16	□□□□□ -1.74
CGR1	YGL029W	MTC2	P34246	357 aa		4.16	□□□□□ -1.74
CGR1	YGL029W	TOK1	P40310	691 aa		4.16	□□□□□ -1.74
CGR1	YGL029W	GYP8	P43570	497 aa		4.16	□□□□□ -1.74
CGR1	YGL029W	DUG1	P43616	481 aa	Known RBP	4.16	□□□□□ -1.74
CGR1	YGL029W	NIT2	P47016	307 aa		4.16	□□□□□ -1.74
CGR1	YGL029W	GCV1	P48015	400 aa		4.16	□□□□□ -1.74
CGR1	YGL029W	PIP2	P52960	996 aa		4.16	□□□□□ -1.74
CGR1	YGL029W	KIP3	P53086	805 aa	Known RBP	4.16	□□□□□ -1.74
CGR1	YGL029W	MET14	Q02196	202 aa		4.16	□□□□□ -1.74
CGR1	YGL029W	MEC3	Q02574	474 aa		4.16	□□□□□ -1.74
CGR1	YGL029W	LCD1	Q04377	747 aa		4.16	□□□□□ -1.74
CGR1	YGL029W	BRE1	Q07457	700 aa	Known RBP	4.16	□□□□□ -1.74
CGR1	YGL029W	NYV1	Q12255	253 aa		4.16	□□□□□ -1.74
CGR1	YGL029W	YER152C	P10356	443 aa		4.15	□□□□□ -1.75
CGR1	YGL029W	RAD18	P10862	487 aa		4.15	□□□□□ -1.75
CGR1	YGL029W	SFL1	P20134	766 aa		4.15	□□□□□ -1.75
CGR1	YGL029W	RET1	P22276	1149 aa	Known RBP	4.15	□□□□□ -1.75
CGR1	YGL029W	DBP2	P24783	546 aa	Known RBP	4.15	□□□□□ -1.75
CGR1	YGL029W	NPP1	P25353	742 aa		4.15	□□□□□ -1.75
CGR1	YGL029W	SCT1	P32784	759 aa		4.15	□□□□□ -1.75
CGR1	YGL029W	PCM1	P38628	557 aa	Known RBP	4.15	□□□□□ -1.75
CGR1	YGL029W	SAH1	P39954	449 aa	Known RBP	4.15	□□□□□ -1.75
CGR1	YGL029W	NEO1	P40527	1151 aa		4.15	□□□□□ -1.75
CGR1	YGL029W	SPC105	P53148	917 aa		4.15	□□□□□ -1.75
CGR1	YGL029W	YGR283C	P53336	341 aa	Predicted RBP	4.15	□□□□□ -1.75
CGR1	YGL029W	ATP25	Q03153	612 aa		4.15	□□□□□ -1.75
CGR1	YGL029W	PTC5	Q12511	572 aa		4.15	□□□□□ -1.75
CGR1	YGL029W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
CGR1	YGL029W	RPL11A	P0C0W9	174 aa	Known RBP	4.14	□□□□□ -1.75
CGR1	YGL029W	WHI3	P34761	661 aa	Known RBP	4.14	□□□□□ -1.75
CGR1	YGL029W	EMC3	P36039	253 aa		4.14	□□□□□ -1.75
CGR1	YGL029W	YKL151C	P36059	337 aa		4.14	□□□□□ -1.75
CGR1	YGL029W	YAR028W	P39548	234 aa		4.14	□□□□□ -1.75
CGR1	YGL029W	ERP2	P39704	215 aa		4.14	□□□□□ -1.75
CGR1	YGL029W	OAF1	P39720	1047 aa	Predicted RBP	4.14	□□□□□ -1.75
CGR1	YGL029W	CAF16	P43569	289 aa		4.14	□□□□□ -1.75
CGR1	YGL029W	RSC8	P43609	557 aa	Known RBP	4.14	□□□□□ -1.75
CGR1	YGL029W	COG8	Q04632	607 aa		4.14	□□□□□ -1.75
CGR1	YGL029W	COG4	Q06096	861 aa		4.14	□□□□□ -1.75
CGR1	YGL029W	SPP382	Q06411	708 aa	Predicted RBP	4.14	□□□□□ -1.75
CGR1	YGL029W	YPL260W	Q08977	551 aa		4.14	□□□□□ -1.75
CGR1	YGL029W	RPL11B	Q3E757	174 aa	Predicted RBP	4.14	□□□□□ -1.75
CGR1	YGL029W	GAL1	P04385	528 aa		4.13	□□□□□ -1.75
CGR1	YGL029W	HMG1	P12683	1054 aa		4.13	□□□□□ -1.75
CGR1	YGL029W	PPH3	P32345	308 aa		4.13	□□□□□ -1.75
CGR1	YGL029W	PRP19	P32523	503 aa	Known RBP	4.13	□□□□□ -1.75
CGR1	YGL029W	SLA2	P33338	968 aa		4.13	□□□□□ -1.75
CGR1	YGL029W	MCD4	P36051	919 aa		4.13	□□□□□ -1.75
CGR1	YGL029W	YRO2	P38079	344 aa		4.13	□□□□□ -1.75
CGR1	YGL029W	CKB2	P38930	258 aa		4.13	□□□□□ -1.75
CGR1	YGL029W	GPP2	P40106	250 aa	Known RBP	4.13	□□□□□ -1.75
CGR1	YGL029W	MMM1	P41800	426 aa		4.13	□□□□□ -1.75
CGR1	YGL029W	PBP1	P53297	722 aa	Known RBP	4.13	□□□□□ -1.75

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