RNA–Protein interactions for RNA: YGL007W

BRP1, Transcript of Dubious ORF located in the upstream region of PMA1, yeastyeast

Gene BRP1, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRP1YGL007W YDL144CQ07589 356 aa2.69□□□□□ -1.98
BRP1YGL007W YIG1Q08956 461 aa2.69□□□□□ -1.98
BRP1YGL007W YLR358CO13565 187 aa2.68□□□□□ -1.98
BRP1YGL007W PHO4P07270 312 aaKnown RBP2.68□□□□□ -1.98
BRP1YGL007W MSM1P22438 575 aa2.68□□□□□ -1.98
BRP1YGL007W YIL089WP40500 205 aa2.68□□□□□ -1.98
BRP1YGL007W YGR117CP53270 476 aa2.68□□□□□ -1.98
BRP1YGL007W ALD6P54115 500 aaKnown RBP2.68□□□□□ -1.98
BRP1YGL007W TOS4Q06266 489 aa2.68□□□□□ -1.98
BRP1YGL007W ALG6Q12001 544 aaKnown RBP2.68□□□□□ -1.98
BRP1YGL007W YOL098CQ12496 1037 aa2.68□□□□□ -1.98
BRP1YGL007W POM152P39685 1337 aa2.68□□□□□ -1.98
BRP1YGL007W SAC3P46674 1301 aa2.68□□□□□ -1.98
BRP1YGL007W HTS1P07263 546 aaKnown RBP2.67□□□□□ -1.98
BRP1YGL007W MRP7P12687 371 aa2.67□□□□□ -1.98
BRP1YGL007W SUI2P20459 304 aaKnown RBP2.67□□□□□ -1.98
BRP1YGL007W CTS1P29029 562 aa2.67□□□□□ -1.98
BRP1YGL007W MGM1P32266 881 aa2.67□□□□□ -1.98
BRP1YGL007W PEP7P32609 515 aa2.67□□□□□ -1.98
BRP1YGL007W NUP133P36161 1157 aa2.67□□□□□ -1.98
BRP1YGL007W DAK2P43550 591 aa2.67□□□□□ -1.98
BRP1YGL007W YGR122WP53272 402 aa2.67□□□□□ -1.98
BRP1YGL007W DUS1P53759 423 aaKnown RBP2.67□□□□□ -1.98
BRP1YGL007W YAF9P53930 226 aa2.67□□□□□ -1.98
BRP1YGL007W TIM50Q02776 476 aa2.67□□□□□ -1.98
BRP1YGL007W PKH1Q03407 766 aa2.67□□□□□ -1.98
BRP1YGL007W SVF1Q05515 481 aa2.67□□□□□ -1.98
BRP1YGL007W APC11Q12157 165 aa2.67□□□□□ -1.98
BRP1YGL007W CIT2P08679 460 aa2.66□□□□□ -1.98
BRP1YGL007W LCB1P25045 558 aaKnown RBP2.66□□□□□ -1.98
BRP1YGL007W SWC3P31376 625 aa2.66□□□□□ -1.98
BRP1YGL007W AFG2P32794 780 aa2.66□□□□□ -1.98
BRP1YGL007W SMC1P32908 1225 aa2.66□□□□□ -1.98
BRP1YGL007W RPT1P33299 467 aaKnown RBP2.66□□□□□ -1.98
BRP1YGL007W REI1P38344 393 aaPredicted RBP2.66□□□□□ -1.98
BRP1YGL007W UBP12P39538 1254 aa2.66□□□□□ -1.98
BRP1YGL007W RPS26AP39938 119 aaKnown RBP2.66□□□□□ -1.98
BRP1YGL007W RPS26BP39939 119 aaKnown RBP2.66□□□□□ -1.98
BRP1YGL007W PEA2P40091 420 aa2.66□□□□□ -1.98
BRP1YGL007W IOC3P43596 787 aa2.66□□□□□ -1.98
BRP1YGL007W VPS4P52917 437 aa2.66□□□□□ -1.98
BRP1YGL007W RPT4P53549 437 aaKnown RBP2.66□□□□□ -1.98
BRP1YGL007W SNO2P53823 222 aa2.66□□□□□ -1.98
BRP1YGL007W TRM44Q02648 567 aaKnown RBP2.66□□□□□ -1.98
BRP1YGL007W YML122CQ03207 126 aa2.66□□□□□ -1.98
BRP1YGL007W PRP42Q03776 544 aaKnown RBP2.66□□□□□ -1.98
BRP1YGL007W TRS120Q04183 1289 aa2.66□□□□□ -1.98
BRP1YGL007W UBX2Q04228 584 aa2.66□□□□□ -1.98
BRP1YGL007W CRF1Q04930 467 aa2.66□□□□□ -1.98
BRP1YGL007W RRG1Q12167 365 aaPredicted RBP2.66□□□□□ -1.98
BRP1YGL007W FLO11P08640 1367 aa2.65□□□□□ -1.98
BRP1YGL007W PMD1P32634 1753 aa2.65□□□□□ -1.99
BRP1YGL007W UTP10P42945 1769 aaKnown RBP2.65□□□□□ -1.99
BRP1YGL007W RPP0P05317 312 aaKnown RBP2.65□□□□□ -1.99
BRP1YGL007W HPR1P17629 752 aaKnown RBP2.65□□□□□ -1.99
BRP1YGL007W PRE10P21242 288 aaKnown RBP RIP-Chip data2.65□□□□□ -1.99not detected
BRP1YGL007W SRP40P32583 406 aaPredicted RBP2.65□□□□□ -1.99
BRP1YGL007W RAD24P32641 659 aa2.65□□□□□ -1.99
BRP1YGL007W SMY2P32909 740 aaKnown RBP2.65□□□□□ -1.99
BRP1YGL007W STV1P37296 890 aa2.65□□□□□ -1.99
BRP1YGL007W NMD2P38798 1089 aaKnown RBP2.65□□□□□ -1.99
BRP1YGL007W NUG1P40010 520 aaKnown RBP2.65□□□□□ -1.99
BRP1YGL007W ATG36P46983 293 aa2.65□□□□□ -1.99
BRP1YGL007W FOL2P51601 243 aaKnown RBP2.65□□□□□ -1.99
BRP1YGL007W MTC3P53077 123 aa2.65□□□□□ -1.99
BRP1YGL007W ELA1P53861 379 aaPredicted RBP2.65□□□□□ -1.99
BRP1YGL007W VPS16Q03308 798 aa2.65□□□□□ -1.99
BRP1YGL007W THI3Q07471 609 aa2.65□□□□□ -1.99
BRP1YGL007W ADR1P07248 1323 aa2.65□□□□□ -1.99
BRP1YGL007W RPS19AP07280 144 aaKnown RBP2.64□□□□□ -1.99
BRP1YGL007W RPS19BP07281 144 aaPredicted RBP2.64□□□□□ -1.99
BRP1YGL007W RPB10P22139 70 aa2.64□□□□□ -1.99
BRP1YGL007W NPR1P22211 790 aa2.64□□□□□ -1.99
BRP1YGL007W NNK1P36003 928 aa2.64□□□□□ -1.99
BRP1YGL007W PNT1P38969 423 aa2.64□□□□□ -1.99
BRP1YGL007W VPS27P40343 622 aaKnown RBP2.64□□□□□ -1.99
BRP1YGL007W MAD1P40957 749 aa2.64□□□□□ -1.99
BRP1YGL007W GSM1P42950 618 aa2.64□□□□□ -1.99
BRP1YGL007W YNL011CP53980 444 aa2.64□□□□□ -1.99
BRP1YGL007W DOS2P54858 310 aa2.64□□□□□ -1.99
BRP1YGL007W IRC4Q03036 179 aa2.64□□□□□ -1.99
BRP1YGL007W CSI1Q04368 295 aa2.64□□□□□ -1.99
BRP1YGL007W FPR4Q06205 392 aaPredicted RBP2.64□□□□□ -1.99
BRP1YGL007W WRS1Q12109 432 aaKnown RBP2.64□□□□□ -1.99
BRP1YGL007W SUP35P05453 685 aaKnown RBP2.63□□□□□ -1.99
BRP1YGL007W CBP1P07252 654 aa2.63□□□□□ -1.99
BRP1YGL007W RPS7AP26786 190 aaKnown RBP2.63□□□□□ -1.99
BRP1YGL007W PPG1P32838 368 aa2.63□□□□□ -1.99
BRP1YGL007W YKL091CP33324 310 aaKnown RBP2.63□□□□□ -1.99
BRP1YGL007W MOT2P34909 587 aaKnown RBP2.63□□□□□ -1.99
BRP1YGL007W MPT5P39016 859 aaKnown RBP RIP-Chip data2.63□□□□□ -1.99not detected
BRP1YGL007W RRT6P53117 311 aaPredicted RBP2.63□□□□□ -1.99
BRP1YGL007W YGR045CP53229 120 aa2.63□□□□□ -1.99
BRP1YGL007W CTR9P89105 1077 aa2.63□□□□□ -1.99
BRP1YGL007W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.63□□□□□ -1.99not detected
BRP1YGL007W AVO1Q08236 1176 aa2.63□□□□□ -1.99
BRP1YGL007W PIN2Q12057 282 aa2.63□□□□□ -1.99
BRP1YGL007W CSR2Q12734 1121 aa2.63□□□□□ -1.99
BRP1YGL007W VPS13Q07878 3144 aa2.62□□□□□ -1.99
BRP1YGL007W FIG2P25653 1609 aa2.62□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms