RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W PSK2Q08217 1101 aa5.43□□□□□ -1.54
CDC4YFL009W PDR18P53756 1333 aa5.42□□□□□ -1.54
CDC4YFL009W TY1B-AO13527 1196 aaKnown RBP5.42□□□□□ -1.54
CDC4YFL009W YMR085WP0CF18 432 aa5.42□□□□□ -1.54
CDC4YFL009W PRE10P21242 288 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
CDC4YFL009W SLA1P32790 1244 aa5.42□□□□□ -1.54
CDC4YFL009W SRL3P36167 246 aa5.42□□□□□ -1.54
CDC4YFL009W ISW1P38144 1129 aa5.42□□□□□ -1.54
CDC4YFL009W RPS26AP39938 119 aaKnown RBP5.42□□□□□ -1.54
CDC4YFL009W RPS26BP39939 119 aaKnown RBP5.42□□□□□ -1.54
CDC4YFL009W YIL001WP40560 513 aa5.42□□□□□ -1.54
CDC4YFL009W TRS85P46944 698 aa5.42□□□□□ -1.54
CDC4YFL009W BRE1Q07457 700 aaKnown RBP5.42□□□□□ -1.54
CDC4YFL009W COBP00163 385 aa5.42□□□□□ -1.54
CDC4YFL009W RAS1P01119 309 aa5.42□□□□□ -1.54
CDC4YFL009W HXK1P04806 485 aaKnown RBP5.42□□□□□ -1.54
CDC4YFL009W KAR9P32526 644 aa5.42□□□□□ -1.54
CDC4YFL009W YKR018CP36114 725 aa5.42□□□□□ -1.54
CDC4YFL009W QDR2P40474 542 aa5.42□□□□□ -1.54
CDC4YFL009W LEM3P42838 414 aa5.42□□□□□ -1.54
CDC4YFL009W GCN20P43535 752 aaKnown RBP5.42□□□□□ -1.54
CDC4YFL009W VPS53P47061 822 aa5.42□□□□□ -1.54
CDC4YFL009W FAR8Q05040 523 aa5.42□□□□□ -1.54
CDC4YFL009W OSH2Q12451 1283 aa5.42□□□□□ -1.54
CDC4YFL009W YOL098CQ12496 1037 aa5.42□□□□□ -1.54
CDC4YFL009W TIF6Q12522 245 aaKnown RBP5.42□□□□□ -1.54
CDC4YFL009W MRP7P12687 371 aa5.41□□□□□ -1.54
CDC4YFL009W GCD2P12754 651 aaPredicted RBP5.41□□□□□ -1.54
CDC4YFL009W TIF3P34167 436 aaKnown RBP5.41□□□□□ -1.54
CDC4YFL009W BEM4P39011 633 aa5.41□□□□□ -1.54
CDC4YFL009W MIC19P43594 170 aa5.41□□□□□ -1.54
CDC4YFL009W JJJ2P46997 583 aa5.41□□□□□ -1.54
CDC4YFL009W MFM1Q02783 413 aa5.41□□□□□ -1.54
CDC4YFL009W YML119WQ03208 357 aa5.41□□□□□ -1.54
CDC4YFL009W PIN2Q12057 282 aa5.41□□□□□ -1.54
CDC4YFL009W CHS5Q12114 671 aaKnown RBP5.41□□□□□ -1.54
CDC4YFL009W PGA3Q12746 312 aaKnown RBP5.41□□□□□ -1.54
CDC4YFL009W RAD1P06777 1100 aa5.41□□□□□ -1.54
CDC4YFL009W TUP1P16649 713 aa5.41□□□□□ -1.54
CDC4YFL009W PHO13P19881 312 aa5.41□□□□□ -1.54
CDC4YFL009W CNS1P33313 385 aa5.41□□□□□ -1.54
CDC4YFL009W VPS35P34110 944 aa5.41□□□□□ -1.54
CDC4YFL009W YKT6P36015 200 aaKnown RBP5.41□□□□□ -1.54
CDC4YFL009W RFT1P38206 574 aaPredicted RBP5.41□□□□□ -1.54
CDC4YFL009W YHL017WP38745 532 aa5.41□□□□□ -1.54
CDC4YFL009W NTA1P40354 457 aa5.41□□□□□ -1.54
CDC4YFL009W GPD2P41911 440 aaKnown RBP5.41□□□□□ -1.54
CDC4YFL009W APC1P53886 1748 aa5.41□□□□□ -1.54
CDC4YFL009W VPS38Q05919 439 aa5.41□□□□□ -1.54
CDC4YFL009W NOP6Q07623 225 aaKnown RBP5.41□□□□□ -1.54
CDC4YFL009W NCB2Q92317 146 aa5.41□□□□□ -1.54
CDC4YFL009W KCC4P25389 1037 aa5.4□□□□□ -1.54
CDC4YFL009W MCM4P30665 933 aaKnown RBP5.4□□□□□ -1.54
CDC4YFL009W BSD2P38356 321 aa5.4□□□□□ -1.54
CDC4YFL009W MRX1P40050 688 aa5.4□□□□□ -1.54
CDC4YFL009W CCM1P48237 864 aaPredicted RBP5.4□□□□□ -1.54
CDC4YFL009W HUL5P53119 910 aa5.4□□□□□ -1.54
CDC4YFL009W BOP3P53958 396 aa5.4□□□□□ -1.54
CDC4YFL009W YOL057WQ08225 711 aa5.4□□□□□ -1.54
CDC4YFL009W NUR1Q12066 484 aa5.4□□□□□ -1.54
CDC4YFL009W TOM70P07213 617 aaKnown RBP5.4□□□□□ -1.55
CDC4YFL009W DUR3P33413 735 aa5.4□□□□□ -1.55
CDC4YFL009W SEG2P34250 1132 aa5.4□□□□□ -1.55
CDC4YFL009W PXL1P36166 706 aa5.4□□□□□ -1.55
CDC4YFL009W CIC1P38779 376 aaKnown RBP5.4□□□□□ -1.55
CDC4YFL009W CCC2P38995 1004 aa5.4□□□□□ -1.55
CDC4YFL009W ARB1P40024 610 aaKnown RBP5.4□□□□□ -1.55
CDC4YFL009W PIB2P53191 635 aa5.4□□□□□ -1.55
CDC4YFL009W ORM1P53224 222 aa5.4□□□□□ -1.55
CDC4YFL009W ALD6P54115 500 aaKnown RBP5.4□□□□□ -1.55
CDC4YFL009W ALO1P54783 526 aaKnown RBP5.4□□□□□ -1.55
CDC4YFL009W BUD6P41697 788 aa5.39□□□□□ -1.55
CDC4YFL009W AAD14P42884 376 aa5.39□□□□□ -1.55
CDC4YFL009W MSN5P52918 1224 aa5.39□□□□□ -1.55
CDC4YFL009W BSC2Q05611 235 aa5.39□□□□□ -1.55
CDC4YFL009W SLK19Q08581 821 aaKnown RBP5.39□□□□□ -1.55
CDC4YFL009W JIP3O13555 125 aa5.39□□□□□ -1.55
CDC4YFL009W RAD4P14736 754 aa5.39□□□□□ -1.55
CDC4YFL009W GCD6P32501 712 aaKnown RBP5.39□□□□□ -1.55
CDC4YFL009W UGA4P32837 571 aa5.39□□□□□ -1.55
CDC4YFL009W SMC1P32908 1225 aa5.39□□□□□ -1.55
CDC4YFL009W BCK2P33306 851 aa5.39□□□□□ -1.55
CDC4YFL009W PIH1P38768 344 aa5.39□□□□□ -1.55
CDC4YFL009W SMF1P38925 575 aa5.39□□□□□ -1.55
CDC4YFL009W TAT2P38967 592 aa5.39□□□□□ -1.55
CDC4YFL009W VAC8P39968 578 aa5.39□□□□□ -1.55
CDC4YFL009W IOC3P43596 787 aa5.39□□□□□ -1.55
CDC4YFL009W SHE10P53075 577 aa5.39□□□□□ -1.55
CDC4YFL009W KRE28Q04431 385 aa5.39□□□□□ -1.55
CDC4YFL009W IMH1Q06704 911 aaKnown RBP5.39□□□□□ -1.55
CDC4YFL009W URB1P34241 1764 aaKnown RBP5.38□□□□□ -1.55
CDC4YFL009W YRF1-2P40105 1681 aa5.38□□□□□ -1.55
CDC4YFL009W RPL22AP05749 121 aaKnown RBP5.38□□□□□ -1.55
CDC4YFL009W SUI3P09064 285 aaKnown RBP5.38□□□□□ -1.55
CDC4YFL009W SEC23P15303 768 aaKnown RBP5.38□□□□□ -1.55
CDC4YFL009W TYR1P20049 452 aa5.38□□□□□ -1.55
CDC4YFL009W ARG1P22768 420 aa5.38□□□□□ -1.55
CDC4YFL009W RPN2P32565 945 aaKnown RBP5.38□□□□□ -1.55
CDC4YFL009W LDH1P38139 375 aa5.38□□□□□ -1.55
CDC4YFL009W RAD55P38953 406 aa5.38□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms