RNA–Protein interactions for RNA: YER063W

THO1, Transcript of Conserved nuclear RNA-binding protein, yeast

Gene THO1, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
THO1	YER063W	CDC20	P26309	610 aa		4.59	□□□□□ -1.67
THO1	YER063W	RPC82	P32349	654 aa		4.59	□□□□□ -1.67
THO1	YER063W	CDC11	P32458	415 aa		4.59	□□□□□ -1.67
THO1	YER063W	HBS1	P32769	611 aa	Known RBP	4.59	□□□□□ -1.67
THO1	YER063W	SCT1	P32784	759 aa		4.59	□□□□□ -1.67
THO1	YER063W	SRP101	P32916	621 aa		4.59	□□□□□ -1.67
THO1	YER063W	FLR1	P38124	548 aa		4.59	□□□□□ -1.67
THO1	YER063W	SIT1	P39980	628 aa		4.59	□□□□□ -1.67
THO1	YER063W	YER158C	P40095	573 aa		4.59	□□□□□ -1.67
THO1	YER063W	NNF1	P47149	201 aa		4.59	□□□□□ -1.67
THO1	YER063W	ERP6	P53198	216 aa		4.59	□□□□□ -1.67
THO1	YER063W	YGR012W	P53206	393 aa		4.59	□□□□□ -1.67
THO1	YER063W	UTP8	P53276	713 aa	Known RBP	4.59	□□□□□ -1.67
THO1	YER063W	VPS62	P53285	467 aa		4.59	□□□□□ -1.67
THO1	YER063W	ORC1	P54784	914 aa	Predicted RBP	4.59	□□□□□ -1.67
THO1	YER063W	TPO1	Q07824	586 aa		4.59	□□□□□ -1.67
THO1	YER063W	HSF1	P10961	833 aa		4.58	□□□□□ -1.68
THO1	YER063W	HSP60	P19882	572 aa	Known RBP	4.58	□□□□□ -1.68
THO1	YER063W	NPP1	P25353	742 aa		4.58	□□□□□ -1.68
THO1	YER063W	ARE1	P25628	610 aa		4.58	□□□□□ -1.68
THO1	YER063W	CDC48	P25694	835 aa	Known RBP	4.58	□□□□□ -1.68
THO1	YER063W	TSL1	P38427	1098 aa	Known RBP	4.58	□□□□□ -1.68
THO1	YER063W	CCC2	P38995	1004 aa		4.58	□□□□□ -1.68
THO1	YER063W	PSP2	P50109	593 aa	Known RBP	4.58	□□□□□ -1.68
THO1	YER063W	UBX5	Q06682	500 aa		4.58	□□□□□ -1.68
THO1	YER063W	CDA1	Q06702	301 aa		4.58	□□□□□ -1.68
THO1	YER063W	HMI1	Q12039	706 aa		4.58	□□□□□ -1.68
THO1	YER063W	EMC1	P25574	760 aa		4.57	□□□□□ -1.68
THO1	YER063W	AFR1	P33304	620 aa		4.57	□□□□□ -1.68
THO1	YER063W	YGR125W	P53273	1036 aa		4.57	□□□□□ -1.68
THO1	YER063W	CLU1	Q03690	1277 aa	Known RBP	4.57	□□□□□ -1.68
THO1	YER063W	YAP6	Q03935	383 aa		4.57	□□□□□ -1.68
THO1	YER063W	ADY3	Q07732	790 aa		4.57	□□□□□ -1.68
THO1	YER063W	CIT1	P00890	479 aa		4.56	□□□□□ -1.68
THO1	YER063W	RPP2A	P05319	106 aa	Known RBP	4.56	□□□□□ -1.68
THO1	YER063W	SPE1	P08432	466 aa		4.56	□□□□□ -1.68
THO1	YER063W	YKL222C	P35995	705 aa		4.56	□□□□□ -1.68
THO1	YER063W	YBR284W	P38150	797 aa		4.56	□□□□□ -1.68
THO1	YER063W	MET12	P46151	657 aa		4.56	□□□□□ -1.68
THO1	YER063W	TAF1	P46677	1066 aa		4.56	□□□□□ -1.68
THO1	YER063W	CCM1	P48237	864 aa	Predicted RBP	4.56	□□□□□ -1.68
THO1	YER063W	LCD1	Q04377	747 aa		4.56	□□□□□ -1.68
THO1	YER063W	YLR224W	Q05947	369 aa		4.56	□□□□□ -1.68
THO1	YER063W	YPR071W	Q12346	211 aa		4.56	□□□□□ -1.68
THO1	YER063W	HIS5	P07172	385 aa		4.55	□□□□□ -1.68
THO1	YER063W	YCR015C	P25616	317 aa		4.55	□□□□□ -1.68
THO1	YER063W	YBR238C	P38330	731 aa	Known RBP	4.55	□□□□□ -1.68
THO1	YER063W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	RIP-Chip
THO1	YER063W	GIP4	P39732	760 aa		4.55	□□□□□ -1.68
THO1	YER063W	YKE2	P52553	114 aa		4.55	□□□□□ -1.68
THO1	YER063W	HUL5	P53119	910 aa		4.55	□□□□□ -1.68
THO1	YER063W	NOP12	Q08208	459 aa	Known RBP	4.55	□□□□□ -1.68
THO1	YER063W	FLC1	Q08967	793 aa		4.55	□□□□□ -1.68
THO1	YER063W	HBN1	Q96VH4	193 aa		4.55	□□□□□ -1.68
THO1	YER063W	REC104	P33323	182 aa		4.54	□□□□□ -1.68
THO1	YER063W	LST4	P34239	828 aa		4.54	□□□□□ -1.68
THO1	YER063W	ATG19	P35193	415 aa		4.54	□□□□□ -1.68
THO1	YER063W	ERT1	P38140	529 aa		4.54	□□□□□ -1.68
THO1	YER063W	TOK1	P40310	691 aa		4.54	□□□□□ -1.68
THO1	YER063W	HUL4	P40985	892 aa		4.54	□□□□□ -1.68
THO1	YER063W	BUL2	Q03758	920 aa	Known RBP	4.54	□□□□□ -1.68
THO1	YER063W	TMA10	Q06177	86 aa		4.54	□□□□□ -1.68
THO1	YER063W	BDF2	Q07442	638 aa		4.54	□□□□□ -1.68
THO1	YER063W	NOT3	P06102	836 aa	Known RBP	4.53	□□□□□ -1.68
THO1	YER063W	PET10	P36139	283 aa		4.53	□□□□□ -1.68
THO1	YER063W	YHR020W	P38708	688 aa	Known RBP	4.53	□□□□□ -1.68
THO1	YER063W	PLB1	P39105	664 aa		4.53	□□□□□ -1.68
THO1	YER063W	CHA4	P43634	648 aa		4.53	□□□□□ -1.68
THO1	YER063W	RAI1	P53063	387 aa	Known RBP	4.53	□□□□□ -1.68
THO1	YER063W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
THO1	YER063W	NSE3	Q05541	303 aa		4.53	□□□□□ -1.68
THO1	YER063W	YDL124W	Q07551	312 aa	Known RBP	4.53	□□□□□ -1.68
THO1	YER063W	CDC53	Q12018	815 aa	Known RBP	4.53	□□□□□ -1.68
THO1	YER063W	YOL098C	Q12496	1037 aa		4.53	□□□□□ -1.68
THO1	YER063W	MSD1	P15179	658 aa	Known RBP	4.52	□□□□□ -1.69
THO1	YER063W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
THO1	YER063W	RFA1	P22336	621 aa	Known RBP	4.52	□□□□□ -1.69
THO1	YER063W	STE11	P23561	717 aa		4.52	□□□□□ -1.69
THO1	YER063W	CTS1	P29029	562 aa		4.52	□□□□□ -1.69
THO1	YER063W	SHM2	P37291	469 aa	Known RBP	4.52	□□□□□ -1.69
THO1	YER063W	MNN10	P50108	393 aa	Known RBP	4.52	□□□□□ -1.69
THO1	YER063W	MCM6	P53091	1017 aa	Known RBP	4.52	□□□□□ -1.69
THO1	YER063W	VPS30	Q02948	557 aa		4.52	□□□□□ -1.69
THO1	YER063W	TOP3	P13099	656 aa		4.51	□□□□□ -1.69
THO1	YER063W	SRP40	P32583	406 aa	Predicted RBP	4.51	□□□□□ -1.69
THO1	YER063W	GGA2	P38817	585 aa	Known RBP	4.51	□□□□□ -1.69
THO1	YER063W	RSP5	P39940	809 aa	Known RBP	4.51	□□□□□ -1.69
THO1	YER063W	IOC3	P43596	787 aa		4.51	□□□□□ -1.69
THO1	YER063W	TAF8	Q03750	510 aa		4.51	□□□□□ -1.69
THO1	YER063W	WHI4	Q07655	649 aa	Known RBP	4.51	□□□□□ -1.69
THO1	YER063W	YOR131C	Q12486	218 aa		4.51	□□□□□ -1.69
THO1	YER063W	STE13	P33894	931 aa		4.5	□□□□□ -1.69
THO1	YER063W	OCA5	P38738	679 aa		4.5	□□□□□ -1.69
THO1	YER063W	URM1	P40554	99 aa	Predicted RBP	4.5	□□□□□ -1.69
THO1	YER063W	UBP6	P43593	499 aa	Known RBP	4.5	□□□□□ -1.69
THO1	YER063W	CAN1	P04817	590 aa		4.49	□□□□□ -1.69
THO1	YER063W	TOM70	P07213	617 aa	Known RBP	4.49	□□□□□ -1.69
THO1	YER063W	GAL11	P19659	1081 aa		4.49	□□□□□ -1.69
THO1	YER063W	NCS6	P53088	359 aa		4.49	□□□□□ -1.69
THO1	YER063W	KCS1	Q12494	1050 aa		4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms