RNA–Protein interactions for RNA: YER050C

RSM18, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM18, Length 417 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM18	YER050C	ATG19	P35193	415 aa		4.82	□□□□□ -1.64
RSM18	YER050C	YRO2	P38079	344 aa		4.82	□□□□□ -1.64
RSM18	YER050C	TAT2	P38967	592 aa		4.82	□□□□□ -1.64
RSM18	YER050C	GIP4	P39732	760 aa		4.82	□□□□□ -1.64
RSM18	YER050C	ALR2	P43553	858 aa		4.82	□□□□□ -1.64
RSM18	YER050C	GYP7	P48365	746 aa		4.82	□□□□□ -1.64
RSM18	YER050C	CLU1	Q03690	1277 aa	Known RBP	4.82	□□□□□ -1.64
RSM18	YER050C	EAF1	Q06337	982 aa		4.82	□□□□□ -1.64
RSM18	YER050C	TPO1	Q07824	586 aa		4.82	□□□□□ -1.64
RSM18	YER050C	EMC1	P25574	760 aa		4.81	□□□□□ -1.64
RSM18	YER050C	YCR015C	P25616	317 aa		4.81	□□□□□ -1.64
RSM18	YER050C	CDC48	P25694	835 aa	Known RBP	4.81	□□□□□ -1.64
RSM18	YER050C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
RSM18	YER050C	SIT1	P39980	628 aa		4.81	□□□□□ -1.64
RSM18	YER050C	MET12	P46151	657 aa		4.81	□□□□□ -1.64
RSM18	YER050C	GCV2	P49095	1034 aa		4.81	□□□□□ -1.64
RSM18	YER050C	VPS62	P53285	467 aa		4.81	□□□□□ -1.64
RSM18	YER050C	YAP6	Q03935	383 aa		4.81	□□□□□ -1.64
RSM18	YER050C	HMI1	Q12039	706 aa		4.81	□□□□□ -1.64
RSM18	YER050C	RAD4	P14736	754 aa		4.8	□□□□□ -1.64
RSM18	YER050C	HSP60	P19882	572 aa	Known RBP	4.8	□□□□□ -1.64
RSM18	YER050C	STE11	P23561	717 aa		4.8	□□□□□ -1.64
RSM18	YER050C	ARE1	P25628	610 aa		4.8	□□□□□ -1.64
RSM18	YER050C	PFD1	P46988	109 aa		4.8	□□□□□ -1.64
RSM18	YER050C	TIM54	P47045	478 aa		4.8	□□□□□ -1.64
RSM18	YER050C	CCM1	P48237	864 aa	Predicted RBP	4.8	□□□□□ -1.64
RSM18	YER050C	UTP8	P53276	713 aa	Known RBP	4.8	□□□□□ -1.64
RSM18	YER050C	VPS30	Q02948	557 aa		4.8	□□□□□ -1.64
RSM18	YER050C	LCD1	Q04377	747 aa		4.8	□□□□□ -1.64
RSM18	YER050C	FMP25	Q08023	583 aa		4.8	□□□□□ -1.64
RSM18	YER050C	HIS5	P07172	385 aa		4.79	□□□□□ -1.64
RSM18	YER050C	SPE1	P08432	466 aa		4.79	□□□□□ -1.64
RSM18	YER050C	CDC6	P09119	513 aa		4.79	□□□□□ -1.64
RSM18	YER050C	RPL8B	P29453	256 aa	Known RBP	4.79	□□□□□ -1.64
RSM18	YER050C	TSL1	P38427	1098 aa	Known RBP	4.79	□□□□□ -1.64
RSM18	YER050C	NNF1	P47149	201 aa		4.79	□□□□□ -1.64
RSM18	YER050C	SFB2	P53953	876 aa		4.79	□□□□□ -1.64
RSM18	YER050C	YLR224W	Q05947	369 aa		4.79	□□□□□ -1.64
RSM18	YER050C	URN1	Q06525	465 aa	Known RBP	4.79	□□□□□ -1.64
RSM18	YER050C	CDA1	Q06702	301 aa		4.79	□□□□□ -1.64
RSM18	YER050C	ADY3	Q07732	790 aa		4.79	□□□□□ -1.64
RSM18	YER050C	HUL4	P40985	892 aa		4.78	□□□□□ -1.64
RSM18	YER050C	TAF1	P46677	1066 aa		4.78	□□□□□ -1.64
RSM18	YER050C	MNN10	P50108	393 aa	Known RBP	4.78	□□□□□ -1.64
RSM18	YER050C	RAI1	P53063	387 aa	Known RBP	4.78	□□□□□ -1.64
RSM18	YER050C	MCM6	P53091	1017 aa	Known RBP	4.78	□□□□□ -1.64
RSM18	YER050C	YGR125W	P53273	1036 aa		4.78	□□□□□ -1.64
RSM18	YER050C	TMA10	Q06177	86 aa		4.78	□□□□□ -1.64
RSM18	YER050C	RFA1	P22336	621 aa	Known RBP	4.77	□□□□□ -1.65
RSM18	YER050C	CTS1	P29029	562 aa		4.77	□□□□□ -1.65
RSM18	YER050C	HBS1	P32769	611 aa	Known RBP	4.77	□□□□□ -1.65
RSM18	YER050C	SHM2	P37291	469 aa	Known RBP	4.77	□□□□□ -1.65
RSM18	YER050C	NPP2	P39997	493 aa		4.77	□□□□□ -1.65
RSM18	YER050C	IOC3	P43596	787 aa		4.77	□□□□□ -1.65
RSM18	YER050C	UBX5	Q06682	500 aa		4.77	□□□□□ -1.65
RSM18	YER050C	NOT3	P06102	836 aa	Known RBP	4.76	□□□□□ -1.65
RSM18	YER050C	REC104	P33323	182 aa		4.76	□□□□□ -1.65
RSM18	YER050C	LST4	P34239	828 aa		4.76	□□□□□ -1.65
RSM18	YER050C	YDL124W	Q07551	312 aa	Known RBP	4.76	□□□□□ -1.65
RSM18	YER050C	NPP1	P25353	742 aa		4.75	□□□□□ -1.65
RSM18	YER050C	YBR284W	P38150	797 aa		4.75	□□□□□ -1.65
RSM18	YER050C	YBR238C	P38330	731 aa	Known RBP	4.75	□□□□□ -1.65
RSM18	YER050C	PLB1	P39105	664 aa		4.75	□□□□□ -1.65
RSM18	YER050C	YPR071W	Q12346	211 aa		4.75	□□□□□ -1.65
RSM18	YER050C	CIT1	P00890	479 aa		4.74	□□□□□ -1.65
RSM18	YER050C	AFR1	P33304	620 aa		4.74	□□□□□ -1.65
RSM18	YER050C	GGA2	P38817	585 aa	Known RBP	4.74	□□□□□ -1.65
RSM18	YER050C	TOK1	P40310	691 aa		4.74	□□□□□ -1.65
RSM18	YER050C	CHA4	P43634	648 aa		4.74	□□□□□ -1.65
RSM18	YER050C	NIT3	P49954	291 aa		4.74	□□□□□ -1.65
RSM18	YER050C	YKE2	P52553	114 aa		4.74	□□□□□ -1.65
RSM18	YER050C	FLC1	Q08967	793 aa		4.74	□□□□□ -1.65
RSM18	YER050C	CDC53	Q12018	815 aa	Known RBP	4.74	□□□□□ -1.65
RSM18	YER050C	YOR131C	Q12486	218 aa		4.74	□□□□□ -1.65
RSM18	YER050C	HCM1	P25364	564 aa		4.73	□□□□□ -1.65
RSM18	YER050C	PET10	P36139	283 aa		4.73	□□□□□ -1.65
RSM18	YER050C	URM1	P40554	99 aa	Predicted RBP	4.73	□□□□□ -1.65
RSM18	YER050C	GSF2	Q04697	403 aa	Known RBP	4.73	□□□□□ -1.65
RSM18	YER050C	HBN1	Q96VH4	193 aa		4.73	□□□□□ -1.65
RSM18	YER050C	TUB2	P02557	457 aa	Known RBP	4.72	□□□□□ -1.65
RSM18	YER050C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
RSM18	YER050C	SED4	P25365	1065 aa		4.72	□□□□□ -1.65
RSM18	YER050C	STE13	P33894	931 aa		4.72	□□□□□ -1.65
RSM18	YER050C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
RSM18	YER050C	HUL5	P53119	910 aa		4.72	□□□□□ -1.65
RSM18	YER050C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	RIP-Chip
RSM18	YER050C	BUL2	Q03758	920 aa	Known RBP	4.72	□□□□□ -1.65
RSM18	YER050C	NPC2	Q12408	173 aa		4.72	□□□□□ -1.65
RSM18	YER050C	RPS9A	O13516	197 aa	Known RBP	4.71	□□□□□ -1.66
RSM18	YER050C	TOM70	P07213	617 aa	Known RBP	4.71	□□□□□ -1.66
RSM18	YER050C	MSD1	P15179	658 aa	Known RBP	4.71	□□□□□ -1.66
RSM18	YER050C	GAL11	P19659	1081 aa		4.71	□□□□□ -1.66
RSM18	YER050C	TYE7	P33122	291 aa	Predicted RBP	4.71	□□□□□ -1.66
RSM18	YER050C	TRM2	P33753	639 aa		4.71	□□□□□ -1.66
RSM18	YER050C	CEP3	P40969	608 aa		4.71	□□□□□ -1.66
RSM18	YER050C	YOL098C	Q12496	1037 aa		4.71	□□□□□ -1.66
RSM18	YER050C	MPH2	P0CD99	609 aa		4.7	□□□□□ -1.66
RSM18	YER050C	DCG1	P32460	244 aa		4.7	□□□□□ -1.66
RSM18	YER050C	SRP40	P32583	406 aa	Predicted RBP	4.7	□□□□□ -1.66
RSM18	YER050C	YHR020W	P38708	688 aa	Known RBP	4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms