RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W YGR125WP53273 1036 aa3.29□□□□□ -1.88
VPS52YDR484W SIZ1Q04195 904 aa3.29□□□□□ -1.88
VPS52YDR484W BDF2Q07442 638 aa3.29□□□□□ -1.88
VPS52YDR484W CYC1P00044 109 aaPredicted RBP3.29□□□□□ -1.88
VPS52YDR484W FUN30P31380 1131 aa3.29□□□□□ -1.88
VPS52YDR484W GGA2P38817 585 aaKnown RBP3.29□□□□□ -1.88
VPS52YDR484W HUL4P40985 892 aa3.29□□□□□ -1.88
VPS52YDR484W HFM1P51979 1187 aa3.29□□□□□ -1.88
VPS52YDR484W SRT1Q03175 343 aa3.29□□□□□ -1.88
VPS52YDR484W FLC1Q08967 793 aa3.29□□□□□ -1.88
VPS52YDR484W CIT1P00890 479 aa3.28□□□□□ -1.88
VPS52YDR484W CMP2P14747 604 aa3.28□□□□□ -1.88
VPS52YDR484W RPC82P32349 654 aa3.28□□□□□ -1.88
VPS52YDR484W YKR078WP36158 585 aaKnown RBP3.28□□□□□ -1.88
VPS52YDR484W YRO2P38079 344 aa3.28□□□□□ -1.88
VPS52YDR484W CCC2P38995 1004 aa3.28□□□□□ -1.88
VPS52YDR484W IOC3P43596 787 aa3.28□□□□□ -1.88
VPS52YDR484W GYP7P48365 746 aa3.28□□□□□ -1.88
VPS52YDR484W MSC2Q03455 724 aa3.28□□□□□ -1.88
VPS52YDR484W HBS1P32769 611 aaKnown RBP3.27□□□□□ -1.89
VPS52YDR484W YHR020WP38708 688 aaKnown RBP3.27□□□□□ -1.89
VPS52YDR484W GIC1P38785 314 aa3.27□□□□□ -1.89
VPS52YDR484W YAP1801P38856 637 aa3.27□□□□□ -1.89
VPS52YDR484W PBP1P53297 722 aaKnown RBP3.27□□□□□ -1.89
VPS52YDR484W UBX5Q06682 500 aa3.27□□□□□ -1.89
VPS52YDR484W YDL124WQ07551 312 aaKnown RBP3.27□□□□□ -1.89
VPS52YDR484W RIB2Q12362 591 aaKnown RBP3.27□□□□□ -1.89
VPS52YDR484W YTA7P40340 1379 aa3.27□□□□□ -1.89
VPS52YDR484W GAL10P04397 699 aa3.27□□□□□ -1.89
VPS52YDR484W RAD53P22216 821 aa3.27□□□□□ -1.89
VPS52YDR484W YKL091CP33324 310 aaKnown RBP3.27□□□□□ -1.89
VPS52YDR484W YER158CP40095 573 aa3.27□□□□□ -1.89
VPS52YDR484W CCM1P48237 864 aaPredicted RBP3.27□□□□□ -1.89
VPS52YDR484W LCD1Q04377 747 aa3.27□□□□□ -1.89
VPS52YDR484W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
VPS52YDR484W GAL11P19659 1081 aa3.26□□□□□ -1.89
VPS52YDR484W CDC48P25694 835 aaKnown RBP3.26□□□□□ -1.89
VPS52YDR484W ECM21P38167 1117 aaKnown RBP3.26□□□□□ -1.89
VPS52YDR484W TSL1P38427 1098 aaKnown RBP3.26□□□□□ -1.89
VPS52YDR484W CHZ1P40019 153 aaPredicted RBP3.26□□□□□ -1.89
VPS52YDR484W AIM21P40563 679 aa3.26□□□□□ -1.89
VPS52YDR484W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
VPS52YDR484W URN1Q06525 465 aaKnown RBP3.26□□□□□ -1.89
VPS52YDR484W YPR196WQ06595 470 aa3.26□□□□□ -1.89
VPS52YDR484W RPP2AP05319 106 aaKnown RBP3.25□□□□□ -1.89
VPS52YDR484W SRM1P21827 482 aa3.25□□□□□ -1.89
VPS52YDR484W DOM34P33309 386 aa3.25□□□□□ -1.89
VPS52YDR484W RSP5P39940 809 aaKnown RBP3.25□□□□□ -1.89
VPS52YDR484W ZRG8P40021 1076 aa3.25□□□□□ -1.89
VPS52YDR484W OSW7P43611 510 aa3.25□□□□□ -1.89
VPS52YDR484W RPN4Q03465 531 aa3.25□□□□□ -1.89
VPS52YDR484W ROT1Q03691 256 aa3.25□□□□□ -1.89
VPS52YDR484W TAF8Q03750 510 aa3.25□□□□□ -1.89
VPS52YDR484W FPR4Q06205 392 aaPredicted RBP3.25□□□□□ -1.89
VPS52YDR484W XYL2Q07993 356 aa3.25□□□□□ -1.89
VPS52YDR484W HBN1Q96VH4 193 aa3.25□□□□□ -1.89
VPS52YDR484W ENA1P13587 1091 aa3.25□□□□□ -1.89
VPS52YDR484W YBR284WP38150 797 aa3.25□□□□□ -1.89
VPS52YDR484W MNN10P50108 393 aaKnown RBP3.25□□□□□ -1.89
VPS52YDR484W PSP2P50109 593 aaKnown RBP3.25□□□□□ -1.89
VPS52YDR484W MCM6P53091 1017 aaKnown RBP3.25□□□□□ -1.89
VPS52YDR484W ENA2Q01896 1091 aa3.25□□□□□ -1.89
VPS52YDR484W YPR071WQ12346 211 aa3.25□□□□□ -1.89
VPS52YDR484W ENA5Q12691 1091 aa3.25□□□□□ -1.89
VPS52YDR484W CAN1P04817 590 aa3.24□□□□□ -1.89
VPS52YDR484W HSF1P10961 833 aa3.24□□□□□ -1.89
VPS52YDR484W NPP1P25353 742 aa3.24□□□□□ -1.89
VPS52YDR484W AFR1P33304 620 aa3.24□□□□□ -1.89
VPS52YDR484W REC104P33323 182 aa3.24□□□□□ -1.89
VPS52YDR484W PET10P36139 283 aa3.24□□□□□ -1.89
VPS52YDR484W YBR238CP38330 731 aaKnown RBP3.24□□□□□ -1.89
VPS52YDR484W MND2P40577 368 aa3.24□□□□□ -1.89
VPS52YDR484W YGR012WP53206 393 aa3.24□□□□□ -1.89
VPS52YDR484W SFB2P53953 876 aa3.24□□□□□ -1.89
VPS52YDR484W RXT3Q07458 294 aa3.24□□□□□ -1.89
VPS52YDR484W NTO1Q12311 748 aa3.24□□□□□ -1.89
VPS52YDR484W PMI40P29952 429 aaKnown RBP3.23□□□□□ -1.89
VPS52YDR484W POA1P38218 177 aa3.23□□□□□ -1.89
VPS52YDR484W NPP2P39997 493 aa3.23□□□□□ -1.89
VPS52YDR484W TOK1P40310 691 aa3.23□□□□□ -1.89
VPS52YDR484W SNM1P40993 198 aa3.23□□□□□ -1.89
VPS52YDR484W UBP6P43593 499 aaKnown RBP3.23□□□□□ -1.89
VPS52YDR484W YKE2P52553 114 aa3.23□□□□□ -1.89
VPS52YDR484W VPS30Q02948 557 aa3.23□□□□□ -1.89
VPS52YDR484W PLB2Q03674 706 aa3.23□□□□□ -1.89
VPS52YDR484W BUL2Q03758 920 aaKnown RBP3.23□□□□□ -1.89
VPS52YDR484W TOM70P07213 617 aaKnown RBP3.23□□□□□ -1.89
VPS52YDR484W MSD1P15179 658 aaKnown RBP3.23□□□□□ -1.89
VPS52YDR484W SRP101P32916 621 aa3.23□□□□□ -1.89
VPS52YDR484W ATG19P35193 415 aa3.23□□□□□ -1.89
VPS52YDR484W PBP2P38151 413 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
VPS52YDR484W GTF1P53260 183 aaPredicted RBP3.23□□□□□ -1.89
VPS52YDR484W CDA1Q06702 301 aa3.23□□□□□ -1.89
VPS52YDR484W GPB1Q08886 897 aa3.23□□□□□ -1.89
VPS52YDR484W TOP3P13099 656 aa3.22□□□□□ -1.89
VPS52YDR484W RFA1P22336 621 aaKnown RBP3.22□□□□□ -1.89
VPS52YDR484W BUD6P41697 788 aa3.22□□□□□ -1.89
VPS52YDR484W RAI1P53063 387 aaKnown RBP3.22□□□□□ -1.89
VPS52YDR484W DUS4Q06063 367 aa3.22□□□□□ -1.89
VPS52YDR484W TPO1Q07824 586 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms