RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C MNN1P39106 762 aa6.67□□□□□ -1.34
LSM6YDR378C HFM1P51979 1187 aa6.67□□□□□ -1.34
LSM6YDR378C UTP14Q04500 899 aaKnown RBP6.67□□□□□ -1.34
LSM6YDR378C LPX1Q12405 387 aaKnown RBP6.67□□□□□ -1.34
LSM6YDR378C MSH2P25847 964 aa6.66□□□□□ -1.34
LSM6YDR378C PUB1P32588 453 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34 RIP-Chip
LSM6YDR378C LIP5P32875 414 aa6.66□□□□□ -1.34
LSM6YDR378C AFR1P33304 620 aa6.66□□□□□ -1.34
LSM6YDR378C HSP78P33416 811 aa6.66□□□□□ -1.34
LSM6YDR378C TSL1P38427 1098 aaKnown RBP6.66□□□□□ -1.34
LSM6YDR378C BUL2Q03758 920 aaKnown RBP6.66□□□□□ -1.34
LSM6YDR378C GLT1Q12680 2145 aaKnown RBP6.65□□□□□ -1.34
LSM6YDR378C PHR1P05066 565 aaKnown RBP RIP-Chip data6.65□□□□□ -1.34not detected
LSM6YDR378C RPC82P32349 654 aa6.65□□□□□ -1.34
LSM6YDR378C OMA1P36163 345 aa6.65□□□□□ -1.34
LSM6YDR378C ALG2P43636 503 aa6.65□□□□□ -1.34
LSM6YDR378C ORC3P54790 616 aa6.65□□□□□ -1.34
LSM6YDR378C BRE4Q07660 1125 aa6.65□□□□□ -1.34
LSM6YDR378C RAD53P22216 821 aa6.64□□□□□ -1.35
LSM6YDR378C ERT1P38140 529 aa6.64□□□□□ -1.35
LSM6YDR378C YAP1801P38856 637 aa6.64□□□□□ -1.35
LSM6YDR378C NIT3P49954 291 aa6.64□□□□□ -1.35
LSM6YDR378C SFB2P53953 876 aa6.64□□□□□ -1.35
LSM6YDR378C UGO1Q03327 502 aa6.64□□□□□ -1.35
LSM6YDR378C ABZ1P37254 787 aaPredicted RBP6.63□□□□□ -1.35
LSM6YDR378C ECM21P38167 1117 aaKnown RBP6.63□□□□□ -1.35
LSM6YDR378C PEX6P33760 1030 aa6.62□□□□□ -1.35
LSM6YDR378C NPP2P39997 493 aa6.62□□□□□ -1.35
LSM6YDR378C DAM1P53267 343 aa6.62□□□□□ -1.35
LSM6YDR378C YOR352WQ08816 343 aa6.62□□□□□ -1.35
LSM6YDR378C RFA1P22336 621 aaKnown RBP6.61□□□□□ -1.35
LSM6YDR378C GSY1P23337 708 aa6.61□□□□□ -1.35
LSM6YDR378C YBR238CP38330 731 aaKnown RBP6.61□□□□□ -1.35
LSM6YDR378C YKE2P52553 114 aa6.61□□□□□ -1.35
LSM6YDR378C MSC2Q03455 724 aa6.61□□□□□ -1.35
LSM6YDR378C XYL2Q07993 356 aa6.61□□□□□ -1.35
LSM6YDR378C NTG2Q08214 380 aa6.61□□□□□ -1.35
LSM6YDR378C YGR161W-CQ3E744 92 aa6.61□□□□□ -1.35
LSM6YDR378C CMP2P14747 604 aa6.6□□□□□ -1.35
LSM6YDR378C SFP1P32432 683 aa6.6□□□□□ -1.35
LSM6YDR378C DSS1P39112 969 aa6.6□□□□□ -1.35
LSM6YDR378C CTH1P47976 325 aa6.6□□□□□ -1.35
LSM6YDR378C MAL11P53048 616 aa6.6□□□□□ -1.35
LSM6YDR378C SIZ1Q04195 904 aa6.6□□□□□ -1.35
LSM6YDR378C ENV7Q12003 364 aa6.6□□□□□ -1.35
LSM6YDR378C NOP14Q99207 810 aaKnown RBP6.6□□□□□ -1.35
LSM6YDR378C CYC1P00044 109 aaPredicted RBP6.59□□□□□ -1.35
LSM6YDR378C MPH2P0CD99 609 aa6.59□□□□□ -1.35
LSM6YDR378C ENA1P13587 1091 aa6.59□□□□□ -1.35
LSM6YDR378C MAC1P35192 417 aa6.59□□□□□ -1.35
LSM6YDR378C ETP1P38748 585 aaKnown RBP6.59□□□□□ -1.35
LSM6YDR378C INP52P50942 1183 aa6.59□□□□□ -1.35
LSM6YDR378C YGR283CP53336 341 aaPredicted RBP6.59□□□□□ -1.35
LSM6YDR378C ENA2Q01896 1091 aa6.59□□□□□ -1.35
LSM6YDR378C VPS30Q02948 557 aa6.59□□□□□ -1.35
LSM6YDR378C YDR514CQ04408 483 aa6.59□□□□□ -1.35
LSM6YDR378C VTS1Q08831 523 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35not detected
LSM6YDR378C ENA5Q12691 1091 aa6.59□□□□□ -1.35
LSM6YDR378C MDM12Q92328 271 aa6.59□□□□□ -1.35
LSM6YDR378C SPC29P33419 253 aa6.58□□□□□ -1.36
LSM6YDR378C EMC3P36039 253 aa6.58□□□□□ -1.36
LSM6YDR378C GYP8P43570 497 aa6.58□□□□□ -1.36
LSM6YDR378C RIB2Q12362 591 aaKnown RBP6.58□□□□□ -1.36
LSM6YDR378C NOT3P06102 836 aaKnown RBP6.57□□□□□ -1.36
LSM6YDR378C HSF1P10961 833 aa6.57□□□□□ -1.36
LSM6YDR378C POL12P38121 705 aaPredicted RBP6.57□□□□□ -1.36
LSM6YDR378C ZRG8P40021 1076 aa6.57□□□□□ -1.36
LSM6YDR378C SNO2P53823 222 aa6.57□□□□□ -1.36
LSM6YDR378C SRP101P32916 621 aa6.56□□□□□ -1.36
LSM6YDR378C PSP2P50109 593 aaKnown RBP6.56□□□□□ -1.36
LSM6YDR378C YGR012WP53206 393 aa6.56□□□□□ -1.36
LSM6YDR378C REH1Q06709 432 aa6.56□□□□□ -1.36
LSM6YDR378C DFG16Q99234 619 aa6.56□□□□□ -1.36
LSM6YDR378C GAL10P04397 699 aa6.55□□□□□ -1.36
LSM6YDR378C SRM1P21827 482 aa6.55□□□□□ -1.36
LSM6YDR378C VBA3P25594 458 aa6.55□□□□□ -1.36
LSM6YDR378C RAI1P53063 387 aaKnown RBP6.55□□□□□ -1.36
LSM6YDR378C NOG2P53742 486 aaKnown RBP6.55□□□□□ -1.36
LSM6YDR378C DNM1P54861 757 aa6.55□□□□□ -1.36
LSM6YDR378C TFB2Q02939 513 aa6.55□□□□□ -1.36
LSM6YDR378C ATP25Q03153 612 aa6.55□□□□□ -1.36
LSM6YDR378C MET7Q08645 548 aa6.55□□□□□ -1.36
LSM6YDR378C RPS9AO13516 197 aaKnown RBP6.54□□□□□ -1.36
LSM6YDR378C CEP3P40969 608 aa6.54□□□□□ -1.36
LSM6YDR378C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
LSM6YDR378C YJR142WP47173 342 aa6.54□□□□□ -1.36
LSM6YDR378C PBP1P53297 722 aaKnown RBP6.54□□□□□ -1.36
LSM6YDR378C SGD1Q06132 899 aa6.54□□□□□ -1.36
LSM6YDR378C DAL7P21826 554 aa6.53□□□□□ -1.36
LSM6YDR378C MEF1P25039 761 aa6.53□□□□□ -1.36
LSM6YDR378C STE13P33894 931 aa6.53□□□□□ -1.36
LSM6YDR378C ECL1P48235 211 aa6.53□□□□□ -1.36
LSM6YDR378C ROT1Q03691 256 aa6.53□□□□□ -1.36
LSM6YDR378C CDA1Q06702 301 aa6.53□□□□□ -1.36
LSM6YDR378C YDL177CQ12257 170 aa6.53□□□□□ -1.36
LSM6YDR378C ADR1P07248 1323 aa6.52□□□□□ -1.37
LSM6YDR378C CDC9P04819 755 aa6.52□□□□□ -1.37
LSM6YDR378C RPL8AP17076 256 aaKnown RBP6.52□□□□□ -1.37
LSM6YDR378C URA1P28272 314 aaPredicted RBP6.52□□□□□ -1.37
LSM6YDR378C STO1P34160 861 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 47.2 ms