RNA–Protein interactions for RNA: YDR088C

SLU7, Transcript of RNA splicing factor, yeast

Gene SLU7, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLU7	YDR088C	PRI2	P20457	528 aa		4.81	□□□□□ -1.64
SLU7	YDR088C	LYP1	P32487	611 aa		4.81	□□□□□ -1.64
SLU7	YDR088C	YKL151C	P36059	337 aa		4.81	□□□□□ -1.64
SLU7	YDR088C	YKL069W	P36088	180 aa		4.81	□□□□□ -1.64
SLU7	YDR088C	YGR053C	P53234	283 aa		4.81	□□□□□ -1.64
SLU7	YDR088C	HRQ1	Q05549	1077 aa		4.81	□□□□□ -1.64
SLU7	YDR088C	SSF2	Q12153	453 aa	Predicted RBP	4.81	□□□□□ -1.64
SLU7	YDR088C	RPP2A	P05319	106 aa	Known RBP	4.8	□□□□□ -1.64
SLU7	YDR088C	CCC2	P38995	1004 aa		4.8	□□□□□ -1.64
SLU7	YDR088C	BUL1	P48524	976 aa		4.8	□□□□□ -1.64
SLU7	YDR088C	WHI4	Q07655	649 aa	Known RBP	4.8	□□□□□ -1.64
SLU7	YDR088C	YLR040C	Q07988	224 aa		4.8	□□□□□ -1.64
SLU7	YDR088C	MDM38	Q08179	573 aa		4.8	□□□□□ -1.64
SLU7	YDR088C	TMA46	Q12000	345 aa	Known RBP	4.8	□□□□□ -1.64
SLU7	YDR088C	YGL176C	P46945	554 aa		4.79	□□□□□ -1.64
SLU7	YDR088C	FAL1	Q12099	399 aa	Known RBP	4.79	□□□□□ -1.64
SLU7	YDR088C	EFT1	P32324	842 aa	Known RBP	4.78	□□□□□ -1.64
SLU7	YDR088C	ABD1	P32783	436 aa	Predicted RBP	4.78	□□□□□ -1.64
SLU7	YDR088C	ECM21	P38167	1117 aa	Known RBP	4.78	□□□□□ -1.64
SLU7	YDR088C	SUL1	P38359	859 aa		4.78	□□□□□ -1.64
SLU7	YDR088C	NCS6	P53088	359 aa		4.78	□□□□□ -1.64
SLU7	YDR088C	OPI10	Q08202	246 aa		4.78	□□□□□ -1.64
SLU7	YDR088C	YOL073C	Q08232	322 aa		4.78	□□□□□ -1.64
SLU7	YDR088C	ENB1	Q08299	606 aa		4.78	□□□□□ -1.64
SLU7	YDR088C	RKM4	Q12504	494 aa		4.78	□□□□□ -1.64
SLU7	YDR088C	KAR4	P25583	335 aa		4.77	□□□□□ -1.65
SLU7	YDR088C	YKL107W	P34251	309 aa		4.77	□□□□□ -1.65
SLU7	YDR088C	GIC1	P38785	314 aa		4.77	□□□□□ -1.65
SLU7	YDR088C	PSP2	P50109	593 aa	Known RBP	4.77	□□□□□ -1.65
SLU7	YDR088C	TYW3	P53177	273 aa		4.77	□□□□□ -1.65
SLU7	YDR088C	ORC1	P54784	914 aa	Predicted RBP	4.77	□□□□□ -1.65
SLU7	YDR088C	SRT1	Q03175	343 aa		4.77	□□□□□ -1.65
SLU7	YDR088C	HSF1	P10961	833 aa		4.76	□□□□□ -1.65
SLU7	YDR088C	OCA5	P38738	679 aa		4.76	□□□□□ -1.65
SLU7	YDR088C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
SLU7	YDR088C	YLR225C	Q05948	407 aa	Known RBP	4.76	□□□□□ -1.65
SLU7	YDR088C	CAD1	P24813	409 aa	Known RBP	4.75	□□□□□ -1.65
SLU7	YDR088C	SPF1	P39986	1215 aa	Known RBP	4.75	□□□□□ -1.65
SLU7	YDR088C	URM1	P40554	99 aa	Predicted RBP	4.75	□□□□□ -1.65
SLU7	YDR088C	YMR206W	Q03695	313 aa		4.75	□□□□□ -1.65
SLU7	YDR088C	WRS1	Q12109	432 aa	Known RBP	4.75	□□□□□ -1.65
SLU7	YDR088C	YLL058W	Q12198	575 aa		4.75	□□□□□ -1.65
SLU7	YDR088C	FUN30	P31380	1131 aa		4.74	□□□□□ -1.65
SLU7	YDR088C	NPP2	P39997	493 aa		4.74	□□□□□ -1.65
SLU7	YDR088C	NNF1	P47149	201 aa		4.74	□□□□□ -1.65
SLU7	YDR088C	SPO20	Q04359	397 aa		4.74	□□□□□ -1.65
SLU7	YDR088C	TMN2	Q04562	672 aa		4.74	□□□□□ -1.65
SLU7	YDR088C	TDA5	Q06417	326 aa	Known RBP	4.74	□□□□□ -1.65
SLU7	YDR088C	GRX1	P25373	110 aa	Known RBP	4.73	□□□□□ -1.65
SLU7	YDR088C	STE5	P32917	917 aa		4.72	□□□□□ -1.65
SLU7	YDR088C	SAH1	P39954	449 aa	Known RBP	4.72	□□□□□ -1.65
SLU7	YDR088C	STB4	P50104	949 aa		4.72	□□□□□ -1.65
SLU7	YDR088C	SFB2	P53953	876 aa		4.72	□□□□□ -1.65
SLU7	YDR088C	MCH5	Q08777	521 aa		4.72	□□□□□ -1.65
SLU7	YDR088C	ERG4	P25340	473 aa		4.71	□□□□□ -1.66
SLU7	YDR088C	AGP1	P25376	633 aa		4.71	□□□□□ -1.66
SLU7	YDR088C	ATG19	P35193	415 aa		4.71	□□□□□ -1.66
SLU7	YDR088C	ATF1	P40353	525 aa		4.71	□□□□□ -1.66
SLU7	YDR088C	GUP2	Q08929	609 aa		4.71	□□□□□ -1.66
SLU7	YDR088C	YOL098C	Q12496	1037 aa		4.71	□□□□□ -1.66
SLU7	YDR088C	RAD4	P14736	754 aa		4.7	□□□□□ -1.66
SLU7	YDR088C	SBA1	P28707	216 aa	Known RBP	4.7	□□□□□ -1.66
SLU7	YDR088C	VBA5	P36172	582 aa		4.7	□□□□□ -1.66
SLU7	YDR088C	KTR4	P38131	464 aa		4.7	□□□□□ -1.66
SLU7	YDR088C	QRI1	P43123	477 aa	Known RBP	4.7	□□□□□ -1.66
SLU7	YDR088C	STU2	P46675	888 aa		4.7	□□□□□ -1.66
SLU7	YDR088C	LGE1	Q02796	332 aa	Known RBP	4.7	□□□□□ -1.66
SLU7	YDR088C	UPC2	Q12151	913 aa		4.7	□□□□□ -1.66
SLU7	YDR088C	YTA7	P40340	1379 aa		4.69	□□□□□ -1.66
SLU7	YDR088C	MBP1	P39678	833 aa		4.69	□□□□□ -1.66
SLU7	YDR088C	MUK1	Q02866	612 aa		4.69	□□□□□ -1.66
SLU7	YDR088C	NAN1	Q02931	896 aa	Known RBP	4.69	□□□□□ -1.66
SLU7	YDR088C	OMS1	Q06668	471 aa		4.69	□□□□□ -1.66
SLU7	YDR088C	TRM13	Q12383	476 aa		4.69	□□□□□ -1.66
SLU7	YDR088C	YBR184W	P38299	523 aa		4.68	□□□□□ -1.66
SLU7	YDR088C	SHE9	Q04172	456 aa		4.68	□□□□□ -1.66
SLU7	YDR088C	NSE3	Q05541	303 aa		4.68	□□□□□ -1.66
SLU7	YDR088C	BDF2	Q07442	638 aa		4.68	□□□□□ -1.66
SLU7	YDR088C	TRP4	P07285	380 aa	Predicted RBP	4.67	□□□□□ -1.66
SLU7	YDR088C	TIM54	P47045	478 aa		4.67	□□□□□ -1.66
SLU7	YDR088C	YJL049W	P47048	450 aa		4.67	□□□□□ -1.66
SLU7	YDR088C	HUL5	P53119	910 aa		4.67	□□□□□ -1.66
SLU7	YDR088C	IRC10	Q08118	586 aa		4.67	□□□□□ -1.66
SLU7	YDR088C	ACF2	Q12168	779 aa		4.67	□□□□□ -1.66
SLU7	YDR088C	CDC12	P32468	407 aa	Known RBP	4.66	□□□□□ -1.66
SLU7	YDR088C	STE14	P32584	239 aa		4.66	□□□□□ -1.66
SLU7	YDR088C	PFD1	P46988	109 aa		4.66	□□□□□ -1.66
SLU7	YDR088C	RNT1	Q02555	471 aa		4.66	□□□□□ -1.66
SLU7	YDR088C	CDC53	Q12018	815 aa	Known RBP	4.66	□□□□□ -1.66
SLU7	YDR088C	SED4	P25365	1065 aa		4.65	□□□□□ -1.67
SLU7	YDR088C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
SLU7	YDR088C	MRP8	P35719	219 aa		4.65	□□□□□ -1.67
SLU7	YDR088C	YHR020W	P38708	688 aa	Known RBP	4.65	□□□□□ -1.67
SLU7	YDR088C	SLU7	Q02775	382 aa	Known RBP	4.65	□□□□□ -1.67
SLU7	YDR088C	FMP25	Q08023	583 aa		4.65	□□□□□ -1.67
SLU7	YDR088C	RPL8B	P29453	256 aa	Known RBP	4.64	□□□□□ -1.67
SLU7	YDR088C	SRP40	P32583	406 aa	Predicted RBP	4.64	□□□□□ -1.67
SLU7	YDR088C	YKL091C	P33324	310 aa	Known RBP	4.64	□□□□□ -1.67
SLU7	YDR088C	MTH1	P35198	433 aa		4.64	□□□□□ -1.67
SLU7	YDR088C	IRR1	P40541	1150 aa		4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 57.8 ms