RNA–Protein interactions for RNA: YDL209C

CWC2, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene CWC2, Length 1,020 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWC2	YDL209C	EAR1	Q03212	550 aa		4.94	□□□□□ -1.62
CWC2	YDL209C	FCP1	Q03254	732 aa		4.94	□□□□□ -1.62
CWC2	YDL209C	UBX2	Q04228	584 aa		4.94	□□□□□ -1.62
CWC2	YDL209C	BMS1	Q08965	1183 aa	Known RBP	4.94	□□□□□ -1.62
CWC2	YDL209C	DFG16	Q99234	619 aa		4.94	□□□□□ -1.62
CWC2	YDL209C	COQ4	O13525	335 aa		4.93	□□□□□ -1.62
CWC2	YDL209C	ADP1	P25371	1049 aa		4.93	□□□□□ -1.62
CWC2	YDL209C	THI80	P35202	319 aa		4.93	□□□□□ -1.62
CWC2	YDL209C	YPT53	P36019	220 aa		4.93	□□□□□ -1.62
CWC2	YDL209C	NOG1	Q02892	647 aa	Known RBP	4.93	□□□□□ -1.62
CWC2	YDL209C	PRP42	Q03776	544 aa	Known RBP	4.93	□□□□□ -1.62
CWC2	YDL209C	SGD1	Q06132	899 aa		4.93	□□□□□ -1.62
CWC2	YDL209C	CDA2	Q06703	312 aa		4.93	□□□□□ -1.62
CWC2	YDL209C	TRE1	Q08919	783 aa		4.93	□□□□□ -1.62
CWC2	YDL209C	YVC1	Q12324	675 aa		4.93	□□□□□ -1.62
CWC2	YDL209C	GSC2	P40989	1895 aa		4.92	□□□□□ -1.62
CWC2	YDL209C	PHO4	P07270	312 aa	Known RBP	4.92	□□□□□ -1.62
CWC2	YDL209C	FBP1	P09201	348 aa		4.92	□□□□□ -1.62
CWC2	YDL209C	GAS1	P22146	559 aa	Known RBP	4.92	□□□□□ -1.62
CWC2	YDL209C	HSP78	P33416	811 aa		4.92	□□□□□ -1.62
CWC2	YDL209C	TSA1	P34760	196 aa	Known RBP	4.92	□□□□□ -1.62
CWC2	YDL209C	PPX1	P38698	397 aa		4.92	□□□□□ -1.62
CWC2	YDL209C	NEM1	P38757	446 aa		4.92	□□□□□ -1.62
CWC2	YDL209C	YAR028W	P39548	234 aa		4.92	□□□□□ -1.62
CWC2	YDL209C	MAM1	P40065	302 aa		4.92	□□□□□ -1.62
CWC2	YDL209C	RTR1	P40084	226 aa	Predicted RBP	4.92	□□□□□ -1.62
CWC2	YDL209C	RSM26	P47141	266 aa		4.92	□□□□□ -1.62
CWC2	YDL209C	PEX13	P80667	386 aa		4.92	□□□□□ -1.62
CWC2	YDL209C	MSH3	P25336	1018 aa		4.91	□□□□□ -1.62
CWC2	YDL209C	MGM1	P32266	881 aa		4.91	□□□□□ -1.62
CWC2	YDL209C	SQT1	P35184	431 aa		4.91	□□□□□ -1.62
CWC2	YDL209C	RRP46	P53256	223 aa	Predicted RBP	4.91	□□□□□ -1.62
CWC2	YDL209C	SSY1	Q03770	852 aa		4.91	□□□□□ -1.62
CWC2	YDL209C	DAL4	Q04895	635 aa		4.91	□□□□□ -1.62
CWC2	YDL209C	THI3	Q07471	609 aa		4.91	□□□□□ -1.62
CWC2	YDL209C	MSC6	Q08818	692 aa	Known RBP	4.91	□□□□□ -1.62
CWC2	YDL209C	OXR1	Q08952	273 aa		4.91	□□□□□ -1.62
CWC2	YDL209C	RPS7A	P26786	190 aa	Known RBP	4.9	□□□□□ -1.63
CWC2	YDL209C	PRO1	P32264	428 aa		4.9	□□□□□ -1.63
CWC2	YDL209C	MET4	P32389	672 aa		4.9	□□□□□ -1.63
CWC2	YDL209C	UGA4	P32837	571 aa		4.9	□□□□□ -1.63
CWC2	YDL209C	ATG14	P38270	344 aa		4.9	□□□□□ -1.63
CWC2	YDL209C	SPL2	P38839	148 aa		4.9	□□□□□ -1.63
CWC2	YDL209C	DAK2	P43550	591 aa		4.9	□□□□□ -1.63
CWC2	YDL209C	MTC3	P53077	123 aa		4.9	□□□□□ -1.63
CWC2	YDL209C	DNM1	P54861	757 aa		4.9	□□□□□ -1.63
CWC2	YDL209C	ULP1	Q02724	621 aa		4.9	□□□□□ -1.63
CWC2	YDL209C	TPP1	Q03796	238 aa		4.9	□□□□□ -1.63
CWC2	YDL209C	TOS4	Q06266	489 aa		4.9	□□□□□ -1.63
CWC2	YDL209C	YOL057W	Q08225	711 aa		4.9	□□□□□ -1.63
CWC2	YDL209C	PUS7	Q08647	676 aa	Known RBP	4.9	□□□□□ -1.63
CWC2	YDL209C	LYS2	P07702	1392 aa		4.9	□□□□□ -1.63
CWC2	YDL209C	VMA4	P22203	233 aa	Known RBP	4.89	□□□□□ -1.63
CWC2	YDL209C	PAH1	P32567	862 aa		4.89	□□□□□ -1.63
CWC2	YDL209C	HSE1	P38753	452 aa		4.89	□□□□□ -1.63
CWC2	YDL209C	PEX7	P39108	375 aa		4.89	□□□□□ -1.63
CWC2	YDL209C	YVH1	Q02256	364 aa	Known RBP	4.89	□□□□□ -1.63
CWC2	YDL209C	UTP5	Q04177	643 aa	Known RBP	4.89	□□□□□ -1.63
CWC2	YDL209C	YLR225C	Q05948	407 aa	Known RBP	4.89	□□□□□ -1.63
CWC2	YDL209C	LAP2	Q10740	671 aa		4.89	□□□□□ -1.63
CWC2	YDL209C	PRD1	P25375	712 aa		4.88	□□□□□ -1.63
CWC2	YDL209C	IRC4	Q03036	179 aa		4.88	□□□□□ -1.63
CWC2	YDL209C	IOC4	Q04213	475 aa		4.88	□□□□□ -1.63
CWC2	YDL209C	YLR257W	Q06146	321 aa	Known RBP	4.88	□□□□□ -1.63
CWC2	YDL209C	ACK1	Q07622	623 aa	Predicted RBP	4.88	□□□□□ -1.63
CWC2	YDL209C	GIN4	Q12263	1142 aa		4.88	□□□□□ -1.63
CWC2	YDL209C	FLO11	P08640	1367 aa		4.88	□□□□□ -1.63
CWC2	YDL209C	LCB1	P25045	558 aa	Known RBP	4.87	□□□□□ -1.63
CWC2	YDL209C	SEC20	P28791	383 aa		4.87	□□□□□ -1.63
CWC2	YDL209C	NUP133	P36161	1157 aa		4.87	□□□□□ -1.63
CWC2	YDL209C	FLR1	P38124	548 aa		4.87	□□□□□ -1.63
CWC2	YDL209C	PTC7	P38797	343 aa		4.87	□□□□□ -1.63
CWC2	YDL209C	PEX28	P38848	579 aa		4.87	□□□□□ -1.63
CWC2	YDL209C	PSF2	P40359	213 aa		4.87	□□□□□ -1.63
CWC2	YDL209C	GTS1	P40956	396 aa		4.87	□□□□□ -1.63
CWC2	YDL209C	GYP7	P48365	746 aa		4.87	□□□□□ -1.63
CWC2	YDL209C	YNR063W	P53749	607 aa		4.87	□□□□□ -1.63
CWC2	YDL209C	ORC3	P54790	616 aa		4.87	□□□□□ -1.63
CWC2	YDL209C	WHI5	Q12416	295 aa		4.87	□□□□□ -1.63
CWC2	YDL209C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
CWC2	YDL209C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
CWC2	YDL209C	NMD3	P38861	518 aa	Known RBP	4.86	□□□□□ -1.63
CWC2	YDL209C	RSA3	Q05942	220 aa	Known RBP	4.86	□□□□□ -1.63
CWC2	YDL209C	HRK1	Q08732	759 aa	Known RBP	4.86	□□□□□ -1.63
CWC2	YDL209C	SWI1	P09547	1314 aa		4.86	□□□□□ -1.63
CWC2	YDL209C	VPS13	Q07878	3144 aa		4.85	□□□□□ -1.63
CWC2	YDL209C	SUP35	P05453	685 aa	Known RBP	4.85	□□□□□ -1.63
CWC2	YDL209C	YHL012W	P38709	493 aa		4.85	□□□□□ -1.63
CWC2	YDL209C	YPL109C	Q02981	657 aa		4.85	□□□□□ -1.63
CWC2	YDL209C	ADI1	Q03677	179 aa		4.85	□□□□□ -1.63
CWC2	YDL209C	WRS1	Q12109	432 aa	Known RBP	4.85	□□□□□ -1.63
CWC2	YDL209C	LPX1	Q12405	387 aa	Known RBP	4.85	□□□□□ -1.63
CWC2	YDL209C	SNU66	Q12420	587 aa	Predicted RBP	4.85	□□□□□ -1.63
CWC2	YDL209C	MRP7	P12687	371 aa		4.84	□□□□□ -1.63
CWC2	YDL209C	RPT1	P33299	467 aa	Known RBP	4.84	□□□□□ -1.63
CWC2	YDL209C	RTT109	Q07794	436 aa		4.84	□□□□□ -1.63
CWC2	YDL209C	PSF3	Q12146	194 aa		4.84	□□□□□ -1.63
CWC2	YDL209C	RPT3	P33298	428 aa	Known RBP	4.83	□□□□□ -1.64
CWC2	YDL209C	ADD66	P36040	267 aa		4.83	□□□□□ -1.64
CWC2	YDL209C	RDH54	P38086	958 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms