RNA–Protein interactions for RNA: YDL170W

UGA3, Transcript of Transcriptional activator for GABA-dependent induction of GABA genes, yeast

Gene UGA3, Length 1,587 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UGA3	YDL170W	KAR2	P16474	682 aa	Known RBP	4.92	□□□□□ -1.62
UGA3	YDL170W	BAS1	P22035	811 aa		4.92	□□□□□ -1.62
UGA3	YDL170W	SWI3	P32591	825 aa		4.92	□□□□□ -1.62
UGA3	YDL170W	SQT1	P35184	431 aa		4.92	□□□□□ -1.62
UGA3	YDL170W	ATG14	P38270	344 aa		4.92	□□□□□ -1.62
UGA3	YDL170W	YBR184W	P38299	523 aa		4.92	□□□□□ -1.62
UGA3	YDL170W	GEM1	P39722	662 aa		4.92	□□□□□ -1.62
UGA3	YDL170W	XKS1	P42826	600 aa		4.92	□□□□□ -1.62
UGA3	YDL170W	UGO1	Q03327	502 aa		4.92	□□□□□ -1.62
UGA3	YDL170W	YLR257W	Q06146	321 aa	Known RBP	4.92	□□□□□ -1.62
UGA3	YDL170W	RLP24	Q07915	199 aa	Known RBP	4.92	□□□□□ -1.62
UGA3	YDL170W	LPX1	Q12405	387 aa	Known RBP	4.92	□□□□□ -1.62
UGA3	YDL170W	RTP1	Q12751	981 aa		4.92	□□□□□ -1.62
UGA3	YDL170W	SSK2	P53599	1579 aa		4.91	□□□□□ -1.62
UGA3	YDL170W	SST2	P11972	698 aa	Known RBP	4.91	□□□□□ -1.62
UGA3	YDL170W	HSC82	P15108	705 aa	Known RBP	4.91	□□□□□ -1.62
UGA3	YDL170W	DAL5	P15365	543 aa		4.91	□□□□□ -1.62
UGA3	YDL170W	RET1	P22276	1149 aa	Known RBP	4.91	□□□□□ -1.62
UGA3	YDL170W	DUT1	P33317	147 aa		4.91	□□□□□ -1.62
UGA3	YDL170W	PTH2	P34222	208 aa		4.91	□□□□□ -1.62
UGA3	YDL170W	HSE1	P38753	452 aa		4.91	□□□□□ -1.62
UGA3	YDL170W	HUL4	P40985	892 aa		4.91	□□□□□ -1.62
UGA3	YDL170W	GPP1	P41277	250 aa	Known RBP	4.91	□□□□□ -1.62
UGA3	YDL170W	ORC3	P54790	616 aa		4.91	□□□□□ -1.62
UGA3	YDL170W	ULP1	Q02724	621 aa		4.91	□□□□□ -1.62
UGA3	YDL170W	ESC2	Q06340	456 aa		4.91	□□□□□ -1.62
UGA3	YDL170W	PSK2	Q08217	1101 aa		4.91	□□□□□ -1.62
UGA3	YDL170W	GFD2	P25370	566 aa	Known RBP	4.91	□□□□□ -1.62
UGA3	YDL170W	RPL8B	P29453	256 aa	Known RBP	4.91	□□□□□ -1.62
UGA3	YDL170W	TRZ1	P36159	838 aa	Predicted RBP	4.91	□□□□□ -1.62
UGA3	YDL170W	PEX14	P53112	341 aa		4.91	□□□□□ -1.62
UGA3	YDL170W	SPC105	P53148	917 aa		4.91	□□□□□ -1.62
UGA3	YDL170W	YNR063W	P53749	607 aa		4.91	□□□□□ -1.62
UGA3	YDL170W	UME1	Q03010	460 aa		4.91	□□□□□ -1.62
UGA3	YDL170W	CDA2	Q06703	312 aa		4.91	□□□□□ -1.62
UGA3	YDL170W	THI73	Q07904	523 aa		4.91	□□□□□ -1.62
UGA3	YDL170W	LAP2	Q10740	671 aa		4.91	□□□□□ -1.62
UGA3	YDL170W	FAP7	Q12055	197 aa	Predicted RBP	4.91	□□□□□ -1.62
UGA3	YDL170W	MPD2	Q99316	277 aa		4.91	□□□□□ -1.62
UGA3	YDL170W	TAF13	P11747	167 aa		4.9	□□□□□ -1.63
UGA3	YDL170W	STE5	P32917	917 aa		4.9	□□□□□ -1.63
UGA3	YDL170W	YBR071W	P38243	211 aa		4.9	□□□□□ -1.63
UGA3	YDL170W	YHL012W	P38709	493 aa		4.9	□□□□□ -1.63
UGA3	YDL170W	ERP6	P53198	216 aa		4.9	□□□□□ -1.63
UGA3	YDL170W	COG6	P53959	839 aa		4.9	□□□□□ -1.63
UGA3	YDL170W	RSA3	Q05942	220 aa	Known RBP	4.9	□□□□□ -1.63
UGA3	YDL170W	HRK1	Q08732	759 aa	Known RBP	4.9	□□□□□ -1.63
UGA3	YDL170W	RTT10	Q08924	1013 aa		4.9	□□□□□ -1.63
UGA3	YDL170W	ARE1	P25628	610 aa		4.89	□□□□□ -1.63
UGA3	YDL170W	PEX6	P33760	1030 aa		4.89	□□□□□ -1.63
UGA3	YDL170W	TSA1	P34760	196 aa	Known RBP	4.89	□□□□□ -1.63
UGA3	YDL170W	PEX28	P38848	579 aa		4.89	□□□□□ -1.63
UGA3	YDL170W	SRB7	P47822	140 aa		4.89	□□□□□ -1.63
UGA3	YDL170W	PIP2	P52960	996 aa		4.89	□□□□□ -1.63
UGA3	YDL170W	TGL2	P54857	326 aa		4.89	□□□□□ -1.63
UGA3	YDL170W	EAF1	Q06337	982 aa		4.89	□□□□□ -1.63
UGA3	YDL170W	SGS1	P35187	1447 aa		4.89	□□□□□ -1.63
UGA3	YDL170W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
UGA3	YDL170W	TAF1	P46677	1066 aa		4.88	□□□□□ -1.63
UGA3	YDL170W	HSV2	P50079	448 aa	Predicted RBP	4.88	□□□□□ -1.63
UGA3	YDL170W	FMP25	Q08023	583 aa		4.88	□□□□□ -1.63
UGA3	YDL170W	TRE2	Q08693	809 aa		4.88	□□□□□ -1.63
UGA3	YDL170W	TMA46	Q12000	345 aa	Known RBP	4.88	□□□□□ -1.63
UGA3	YDL170W	DRS2	P39524	1355 aa		4.88	□□□□□ -1.63
UGA3	YDL170W	EUG1	P32474	517 aa		4.87	□□□□□ -1.63
UGA3	YDL170W	MRP8	P35719	219 aa		4.87	□□□□□ -1.63
UGA3	YDL170W	APL2	P36000	726 aa	Predicted RBP	4.87	□□□□□ -1.63
UGA3	YDL170W	MUM2	P38236	366 aa		4.87	□□□□□ -1.63
UGA3	YDL170W	IRR1	P40541	1150 aa		4.87	□□□□□ -1.63
UGA3	YDL170W	FAF1	P40546	346 aa	Predicted RBP	4.87	□□□□□ -1.63
UGA3	YDL170W	YNL193W	P53870	558 aa		4.87	□□□□□ -1.63
UGA3	YDL170W	YNL034W	P53963	612 aa		4.87	□□□□□ -1.63
UGA3	YDL170W	YNL018C	P53976	612 aa		4.87	□□□□□ -1.63
UGA3	YDL170W	MET14	Q02196	202 aa		4.87	□□□□□ -1.63
UGA3	YDL170W	SXM1	Q04175	944 aa	Known RBP	4.87	□□□□□ -1.63
UGA3	YDL170W	GRC3	Q07845	632 aa		4.87	□□□□□ -1.63
UGA3	YDL170W	PSR2	Q07949	397 aa		4.87	□□□□□ -1.63
UGA3	YDL170W	GCR1	P07261	785 aa		4.87	□□□□□ -1.63
UGA3	YDL170W	EXO84	P38261	753 aa		4.87	□□□□□ -1.63
UGA3	YDL170W	NDE1	P40215	560 aa		4.87	□□□□□ -1.63
UGA3	YDL170W	YJL045W	P47052	634 aa		4.87	□□□□□ -1.63
UGA3	YDL170W	RTA1	P53047	317 aa		4.87	□□□□□ -1.63
UGA3	YDL170W	GPG1	P53130	126 aa		4.87	□□□□□ -1.63
UGA3	YDL170W	SDA1	P53313	767 aa	Known RBP	4.87	□□□□□ -1.63
UGA3	YDL170W	TSR2	Q06672	205 aa	Known RBP	4.87	□□□□□ -1.63
UGA3	YDL170W	SPS1	P08458	490 aa		4.86	□□□□□ -1.63
UGA3	YDL170W	SAM35	P14693	329 aa		4.86	□□□□□ -1.63
UGA3	YDL170W	AGP1	P25376	633 aa		4.86	□□□□□ -1.63
UGA3	YDL170W	MDL2	P33311	773 aa		4.86	□□□□□ -1.63
UGA3	YDL170W	RIM4	P38741	713 aa		4.86	□□□□□ -1.63
UGA3	YDL170W	ETP1	P38748	585 aa	Known RBP	4.86	□□□□□ -1.63
UGA3	YDL170W	FOL2	P51601	243 aa	Known RBP	4.86	□□□□□ -1.63
UGA3	YDL170W	YPL109C	Q02981	657 aa		4.86	□□□□□ -1.63
UGA3	YDL170W	ADI1	Q03677	179 aa		4.86	□□□□□ -1.63
UGA3	YDL170W	TAF8	Q03750	510 aa		4.86	□□□□□ -1.63
UGA3	YDL170W	SPC19	Q03954	165 aa		4.86	□□□□□ -1.63
UGA3	YDL170W	SHE9	Q04172	456 aa		4.86	□□□□□ -1.63
UGA3	YDL170W	YDL177C	Q12257	170 aa		4.86	□□□□□ -1.63
UGA3	YDL170W	CDC31	P06704	161 aa	Known RBP	4.85	□□□□□ -1.63
UGA3	YDL170W	PTP2	P29461	750 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms