RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A PBP1P53297 722 aaKnown RBP4.78□□□□□ -1.64
RIM1YCR028C-A YPR196WQ06595 470 aa4.78□□□□□ -1.64
RIM1YCR028C-A BDF2Q07442 638 aa4.78□□□□□ -1.64
RIM1YCR028C-A HBN1Q96VH4 193 aa4.78□□□□□ -1.64
RIM1YCR028C-A YHR020WP38708 688 aaKnown RBP4.77□□□□□ -1.65
RIM1YCR028C-A SIT1P39980 628 aa4.77□□□□□ -1.65
RIM1YCR028C-A ZRG8P40021 1076 aa4.77□□□□□ -1.65
RIM1YCR028C-A SPT20P50875 604 aa4.77□□□□□ -1.65
RIM1YCR028C-A RIM8P53179 542 aa4.77□□□□□ -1.65
RIM1YCR028C-A GCN5Q03330 439 aa4.77□□□□□ -1.65
RIM1YCR028C-A YOR131CQ12486 218 aa4.77□□□□□ -1.65
RIM1YCR028C-A SOD2P00447 233 aa4.76□□□□□ -1.65
RIM1YCR028C-A PRP6P19735 899 aaPredicted RBP4.76□□□□□ -1.65
RIM1YCR028C-A SCT1P32784 759 aa4.76□□□□□ -1.65
RIM1YCR028C-A AFR1P33304 620 aa4.76□□□□□ -1.65
RIM1YCR028C-A YKL091CP33324 310 aaKnown RBP4.76□□□□□ -1.65
RIM1YCR028C-A TOD6P34219 525 aa4.76□□□□□ -1.65
RIM1YCR028C-A YKR078WP36158 585 aaKnown RBP4.76□□□□□ -1.65
RIM1YCR028C-A TSL1P38427 1098 aaKnown RBP4.76□□□□□ -1.65
RIM1YCR028C-A YER158CP40095 573 aa4.76□□□□□ -1.65
RIM1YCR028C-A GCV2P49095 1034 aa4.76□□□□□ -1.65
RIM1YCR028C-A LCD1Q04377 747 aa4.76□□□□□ -1.65
RIM1YCR028C-A DUS4Q06063 367 aa4.76□□□□□ -1.65
RIM1YCR028C-A RXT3Q07458 294 aa4.76□□□□□ -1.65
RIM1YCR028C-A GPB1Q08886 897 aa4.76□□□□□ -1.65
RIM1YCR028C-A CDC48P25694 835 aaKnown RBP4.75□□□□□ -1.65
RIM1YCR028C-A THI80P35202 319 aa4.75□□□□□ -1.65
RIM1YCR028C-A ERT1P38140 529 aa4.75□□□□□ -1.65
RIM1YCR028C-A MND2P40577 368 aa4.75□□□□□ -1.65
RIM1YCR028C-A YGR012WP53206 393 aa4.75□□□□□ -1.65
RIM1YCR028C-A NPL3Q01560 414 aaKnown RBP RIP-Chip data4.75□□□□□ -1.65not detected
RIM1YCR028C-A YDL124WQ07551 312 aaKnown RBP4.75□□□□□ -1.65
RIM1YCR028C-A TOP3P13099 656 aa4.74□□□□□ -1.65
RIM1YCR028C-A RPC82P32349 654 aa4.74□□□□□ -1.65
RIM1YCR028C-A SRP101P32916 621 aa4.74□□□□□ -1.65
RIM1YCR028C-A DOM34P33309 386 aa4.74□□□□□ -1.65
RIM1YCR028C-A REC104P33323 182 aa4.74□□□□□ -1.65
RIM1YCR028C-A POA1P38218 177 aa4.74□□□□□ -1.65
RIM1YCR028C-A GGA2P38817 585 aaKnown RBP4.74□□□□□ -1.65
RIM1YCR028C-A TOK1P40310 691 aa4.74□□□□□ -1.65
RIM1YCR028C-A CCM1P48237 864 aaPredicted RBP4.74□□□□□ -1.65
RIM1YCR028C-A TAF8Q03750 510 aa4.74□□□□□ -1.65
RIM1YCR028C-A YDR132CQ03900 495 aa4.74□□□□□ -1.65
RIM1YCR028C-A ACK1Q07622 623 aaPredicted RBP4.74□□□□□ -1.65
RIM1YCR028C-A TPO1Q07824 586 aa4.74□□□□□ -1.65
RIM1YCR028C-A CAN1P04817 590 aa4.73□□□□□ -1.65
RIM1YCR028C-A HSF1P10961 833 aa4.73□□□□□ -1.65
RIM1YCR028C-A MSD1P15179 658 aaKnown RBP4.73□□□□□ -1.65
RIM1YCR028C-A PET10P36139 283 aa4.73□□□□□ -1.65
RIM1YCR028C-A BUL2Q03758 920 aaKnown RBP4.73□□□□□ -1.65
RIM1YCR028C-A CDA1Q06702 301 aa4.73□□□□□ -1.65
RIM1YCR028C-A NOT3P06102 836 aaKnown RBP4.72□□□□□ -1.65
RIM1YCR028C-A GAL11P19659 1081 aa4.72□□□□□ -1.65
RIM1YCR028C-A EMC1P25574 760 aa4.72□□□□□ -1.65
RIM1YCR028C-A CDC20P26309 610 aa4.72□□□□□ -1.65
RIM1YCR028C-A YKE2P52553 114 aa4.72□□□□□ -1.65
RIM1YCR028C-A YLR358CO13565 187 aa4.71□□□□□ -1.66
RIM1YCR028C-A TOM70P07213 617 aaKnown RBP4.71□□□□□ -1.66
RIM1YCR028C-A CDC6P09119 513 aa4.71□□□□□ -1.66
RIM1YCR028C-A BET3P36149 193 aa4.71□□□□□ -1.66
RIM1YCR028C-A YBR238CP38330 731 aaKnown RBP4.71□□□□□ -1.66
RIM1YCR028C-A CHZ1P40019 153 aaPredicted RBP4.71□□□□□ -1.66
RIM1YCR028C-A UBP6P43593 499 aaKnown RBP4.71□□□□□ -1.66
RIM1YCR028C-A MET12P46151 657 aa4.71□□□□□ -1.66
RIM1YCR028C-A PSP2P50109 593 aaKnown RBP4.71□□□□□ -1.66
RIM1YCR028C-A RTA1P53047 317 aa4.71□□□□□ -1.66
RIM1YCR028C-A RPN4Q03465 531 aa4.71□□□□□ -1.66
RIM1YCR028C-A HIS5P07172 385 aa4.7□□□□□ -1.66
RIM1YCR028C-A PRE10P21242 288 aaKnown RBP RIP-Chip data4.7□□□□□ -1.66not detected
RIM1YCR028C-A RFA1P22336 621 aaKnown RBP4.7□□□□□ -1.66
RIM1YCR028C-A PBP2P38151 413 aaKnown RBP RIP-Chip data4.7□□□□□ -1.66not detected
RIM1YCR028C-A RAI1P53063 387 aaKnown RBP4.7□□□□□ -1.66
RIM1YCR028C-A VPS62P53285 467 aa4.7□□□□□ -1.66
RIM1YCR028C-A ADY3Q07732 790 aa4.7□□□□□ -1.66
RIM1YCR028C-A HMI1Q12039 706 aa4.7□□□□□ -1.66
RIM1YCR028C-A SPE1P08432 466 aa4.69□□□□□ -1.66
RIM1YCR028C-A VPS30Q02948 557 aa4.69□□□□□ -1.66
RIM1YCR028C-A YAP6Q03935 383 aa4.69□□□□□ -1.66
RIM1YCR028C-A STE13P33894 931 aa4.68□□□□□ -1.66
RIM1YCR028C-A PLB1P39105 664 aa4.68□□□□□ -1.66
RIM1YCR028C-A CEP3P40969 608 aa4.68□□□□□ -1.66
RIM1YCR028C-A BUD6P41697 788 aa4.68□□□□□ -1.66
RIM1YCR028C-A CHA4P43634 648 aa4.68□□□□□ -1.66
RIM1YCR028C-A SSL1Q04673 461 aaPredicted RBP4.68□□□□□ -1.66
RIM1YCR028C-A YLR224WQ05947 369 aa4.68□□□□□ -1.66
RIM1YCR028C-A WHI4Q07655 649 aaKnown RBP4.68□□□□□ -1.66
RIM1YCR028C-A PPM2Q08282 695 aa4.68□□□□□ -1.66
RIM1YCR028C-A YTA7P40340 1379 aa4.67□□□□□ -1.66
RIM1YCR028C-A PHR1P05066 565 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
RIM1YCR028C-A RPP2AP05319 106 aaKnown RBP4.67□□□□□ -1.66
RIM1YCR028C-A ERR1P0CX10 437 aa4.67□□□□□ -1.66
RIM1YCR028C-A ERR2P0CX11 437 aa4.67□□□□□ -1.66
RIM1YCR028C-A RPD3P32561 433 aa4.67□□□□□ -1.66
RIM1YCR028C-A ATG19P35193 415 aa4.67□□□□□ -1.66
RIM1YCR028C-A MPT5P39016 859 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
RIM1YCR028C-A NIT3P49954 291 aa4.67□□□□□ -1.66
RIM1YCR028C-A ESC8Q08119 714 aa4.67□□□□□ -1.66
RIM1YCR028C-A NOP12Q08208 459 aaKnown RBP4.67□□□□□ -1.66
RIM1YCR028C-A ENV7Q12003 364 aa4.67□□□□□ -1.66
RIM1YCR028C-A LST4P34239 828 aa4.66□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms