RNA–Protein interactions for RNA: YCL005W-A

VMA9, Transcript of Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex, yeastyeast

Gene VMA9, Length 222 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA9YCL005W-A PET10P36139 283 aa2.83□□□□□ -1.96
VMA9YCL005W-A RFC5P38251 354 aa2.83□□□□□ -1.96
VMA9YCL005W-A YAP1801P38856 637 aa2.83□□□□□ -1.96
VMA9YCL005W-A SEC26P41810 973 aaKnown RBP2.83□□□□□ -1.96
VMA9YCL005W-A MAL11P53048 616 aa2.83□□□□□ -1.96
VMA9YCL005W-A ATG13Q06628 738 aa2.83□□□□□ -1.96
VMA9YCL005W-A YDL124WQ07551 312 aaKnown RBP2.83□□□□□ -1.96
VMA9YCL005W-A DFG16Q99234 619 aa2.83□□□□□ -1.96
VMA9YCL005W-A PHO8P11491 566 aa2.82□□□□□ -1.96
VMA9YCL005W-A CLC1P17891 233 aa2.82□□□□□ -1.96
VMA9YCL005W-A SNF7P39929 240 aaKnown RBP2.82□□□□□ -1.96
VMA9YCL005W-A SIT1P39980 628 aa2.82□□□□□ -1.96
VMA9YCL005W-A YER158CP40095 573 aa2.82□□□□□ -1.96
VMA9YCL005W-A GYP8P43570 497 aa2.82□□□□□ -1.96
VMA9YCL005W-A UBP6P43593 499 aaKnown RBP2.82□□□□□ -1.96
VMA9YCL005W-A ALG12P53730 551 aa2.82□□□□□ -1.96
VMA9YCL005W-A ORC3P54790 616 aa2.82□□□□□ -1.96
VMA9YCL005W-A SRP1Q02821 542 aaKnown RBP2.82□□□□□ -1.96
VMA9YCL005W-A ROT1Q03691 256 aa2.82□□□□□ -1.96
VMA9YCL005W-A FPR4Q06205 392 aaPredicted RBP2.82□□□□□ -1.96
VMA9YCL005W-A MEF1P25039 761 aa2.81□□□□□ -1.96
VMA9YCL005W-A FUN30P31380 1131 aa2.81□□□□□ -1.96
VMA9YCL005W-A PPG1P32838 368 aa2.81□□□□□ -1.96
VMA9YCL005W-A DEF1P35732 738 aaKnown RBP2.81□□□□□ -1.96
VMA9YCL005W-A RRT14P40470 206 aa2.81□□□□□ -1.96
VMA9YCL005W-A HUL4P40985 892 aa2.81□□□□□ -1.96
VMA9YCL005W-A YFR016CP43597 1233 aaKnown RBP2.81□□□□□ -1.96
VMA9YCL005W-A TY4A-JP47023 414 aa2.81□□□□□ -1.96
VMA9YCL005W-A GYP7P48365 746 aa2.81□□□□□ -1.96
VMA9YCL005W-A GCV2P49095 1034 aa2.81□□□□□ -1.96
VMA9YCL005W-A GTF1P53260 183 aaPredicted RBP2.81□□□□□ -1.96
VMA9YCL005W-A MSC2Q03455 724 aa2.81□□□□□ -1.96
VMA9YCL005W-A LCD1Q04377 747 aa2.81□□□□□ -1.96
VMA9YCL005W-A YLL058WQ12198 575 aa2.81□□□□□ -1.96
VMA9YCL005W-A OSW2Q12202 724 aa2.81□□□□□ -1.96
VMA9YCL005W-A SSN2P38931 1420 aa2.81□□□□□ -1.96
VMA9YCL005W-A TCB3Q03640 1545 aaKnown RBP2.8□□□□□ -1.96
VMA9YCL005W-A ADE8P04161 214 aa2.8□□□□□ -1.96
VMA9YCL005W-A THS1P04801 734 aaKnown RBP2.8□□□□□ -1.96
VMA9YCL005W-A THI4P32318 326 aa2.8□□□□□ -1.96
VMA9YCL005W-A RPD3P32561 433 aa2.8□□□□□ -1.96
VMA9YCL005W-A ECM21P38167 1117 aaKnown RBP2.8□□□□□ -1.96
VMA9YCL005W-A GGA2P38817 585 aaKnown RBP2.8□□□□□ -1.96
VMA9YCL005W-A FPR3P38911 411 aaKnown RBP2.8□□□□□ -1.96
VMA9YCL005W-A GDH3P39708 457 aa2.8□□□□□ -1.96
VMA9YCL005W-A FOL2P51601 243 aaKnown RBP2.8□□□□□ -1.96
VMA9YCL005W-A YKE2P52553 114 aa2.8□□□□□ -1.96
VMA9YCL005W-A RSM24Q03976 319 aa2.8□□□□□ -1.96
VMA9YCL005W-A SIZ1Q04195 904 aa2.8□□□□□ -1.96
VMA9YCL005W-A YPR196WQ06595 470 aa2.8□□□□□ -1.96
VMA9YCL005W-A CDA1Q06702 301 aa2.8□□□□□ -1.96
VMA9YCL005W-A CDA2Q06703 312 aa2.8□□□□□ -1.96
VMA9YCL005W-A WHI4Q07655 649 aaKnown RBP2.8□□□□□ -1.96
VMA9YCL005W-A ENV7Q12003 364 aa2.8□□□□□ -1.96
VMA9YCL005W-A PHR1P05066 565 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
VMA9YCL005W-A NOT3P06102 836 aaKnown RBP2.79□□□□□ -1.96
VMA9YCL005W-A KIN2P13186 1147 aaKnown RBP2.79□□□□□ -1.96
VMA9YCL005W-A ENA1P13587 1091 aa2.79□□□□□ -1.96
VMA9YCL005W-A GAS1P22146 559 aaKnown RBP2.79□□□□□ -1.96
VMA9YCL005W-A RNQ1P25367 405 aa2.79□□□□□ -1.96
VMA9YCL005W-A YCL002CP25565 263 aa2.79□□□□□ -1.96
VMA9YCL005W-A CDC48P25694 835 aaKnown RBP2.79□□□□□ -1.96
VMA9YCL005W-A CDC11P32458 415 aa2.79□□□□□ -1.96
VMA9YCL005W-A DOM34P33309 386 aa2.79□□□□□ -1.96
VMA9YCL005W-A REC104P33323 182 aa2.79□□□□□ -1.96
VMA9YCL005W-A TSA1P34760 196 aaKnown RBP2.79□□□□□ -1.96
VMA9YCL005W-A CHZ1P40019 153 aaPredicted RBP2.79□□□□□ -1.96
VMA9YCL005W-A ALG2P43636 503 aa2.79□□□□□ -1.96
VMA9YCL005W-A HSV2P50079 448 aaPredicted RBP2.79□□□□□ -1.96
VMA9YCL005W-A TPO2P53283 614 aa2.79□□□□□ -1.96
VMA9YCL005W-A MRPL22P53881 309 aa2.79□□□□□ -1.96
VMA9YCL005W-A ENA2Q01896 1091 aa2.79□□□□□ -1.96
VMA9YCL005W-A SSL1Q04673 461 aaPredicted RBP2.79□□□□□ -1.96
VMA9YCL005W-A NTG2Q08214 380 aa2.79□□□□□ -1.96
VMA9YCL005W-A ENA5Q12691 1091 aa2.79□□□□□ -1.96
VMA9YCL005W-A HSP82P02829 709 aaKnown RBP2.78□□□□□ -1.96
VMA9YCL005W-A PER1P25625 357 aa2.78□□□□□ -1.96
VMA9YCL005W-A AIM3P38266 947 aaKnown RBP2.78□□□□□ -1.96
VMA9YCL005W-A YBR238CP38330 731 aaKnown RBP2.78□□□□□ -1.96
VMA9YCL005W-A ZRG8P40021 1076 aa2.78□□□□□ -1.96
VMA9YCL005W-A MND2P40577 368 aa2.78□□□□□ -1.96
VMA9YCL005W-A YGR283CP53336 341 aaPredicted RBP2.78□□□□□ -1.96
VMA9YCL005W-A HDA1P53973 706 aa2.78□□□□□ -1.96
VMA9YCL005W-A YDR132CQ03900 495 aa2.78□□□□□ -1.96
VMA9YCL005W-A TPO1Q07824 586 aa2.78□□□□□ -1.96
VMA9YCL005W-A YLR125WQ12138 136 aa2.78□□□□□ -1.96
VMA9YCL005W-A MET6P05694 767 aaKnown RBP2.77□□□□□ -1.97
VMA9YCL005W-A CDC6P09119 513 aa2.77□□□□□ -1.97
VMA9YCL005W-A RAD53P22216 821 aa2.77□□□□□ -1.97
VMA9YCL005W-A MSH2P25847 964 aa2.77□□□□□ -1.97
VMA9YCL005W-A RRP14P36080 434 aaKnown RBP2.77□□□□□ -1.97
VMA9YCL005W-A YKR078WP36158 585 aaKnown RBP2.77□□□□□ -1.97
VMA9YCL005W-A LAM1P38851 1228 aa2.77□□□□□ -1.97
VMA9YCL005W-A DSS1P39112 969 aa2.77□□□□□ -1.97
VMA9YCL005W-A AVT1P47082 602 aa2.77□□□□□ -1.97
VMA9YCL005W-A CCM1P48237 864 aaPredicted RBP2.77□□□□□ -1.97
VMA9YCL005W-A YGR012WP53206 393 aa2.77□□□□□ -1.97
VMA9YCL005W-A NRD1P53617 575 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97 RIP-Chip
VMA9YCL005W-A YAP6Q03935 383 aa2.77□□□□□ -1.97
VMA9YCL005W-A LRS4Q04087 347 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 66.3 ms