RNA–Protein interactions for RNA: YBR254C

TRS20, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeast

Gene TRS20, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRS20	YBR254C	DUS3	Q06053	668 aa	Known RBP	5.05	□□□□□ -1.6
TRS20	YBR254C	KCS1	Q12494	1050 aa		5.05	□□□□□ -1.6
TRS20	YBR254C	HSF1	P10961	833 aa		5.04	□□□□□ -1.6
TRS20	YBR254C	PMI40	P29952	429 aa	Known RBP	5.04	□□□□□ -1.6
TRS20	YBR254C	SRP1	Q02821	542 aa	Known RBP	5.04	□□□□□ -1.6
TRS20	YBR254C	CCC2	P38995	1004 aa		5.03	□□□□□ -1.6
TRS20	YBR254C	AIM21	P40563	679 aa		5.03	□□□□□ -1.6
TRS20	YBR254C	KRI1	P42846	591 aa	Known RBP	5.03	□□□□□ -1.6
TRS20	YBR254C	EXG2	P52911	562 aa		5.03	□□□□□ -1.6
TRS20	YBR254C	SVF1	Q05515	481 aa		5.03	□□□□□ -1.6
TRS20	YBR254C	WHI4	Q07655	649 aa	Known RBP	5.03	□□□□□ -1.6
TRS20	YBR254C	NAP1	P25293	417 aa	Known RBP	5.02	□□□□□ -1.61
TRS20	YBR254C	DEF1	P35732	738 aa	Known RBP	5.02	□□□□□ -1.61
TRS20	YBR254C	MSS4	P38994	779 aa		5.02	□□□□□ -1.61
TRS20	YBR254C	KIN4	Q01919	800 aa		5.02	□□□□□ -1.61
TRS20	YBR254C	SHE9	Q04172	456 aa		5.02	□□□□□ -1.61
TRS20	YBR254C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	5.01	□□□□□ -1.61	not detected
TRS20	YBR254C	GYP7	P48365	746 aa		5.01	□□□□□ -1.61
TRS20	YBR254C	PSP2	P50109	593 aa	Known RBP	5.01	□□□□□ -1.61
TRS20	YBR254C	RPP2A	P05319	106 aa	Known RBP	5	□□□□□ -1.61
TRS20	YBR254C	NPP1	P25353	742 aa		5	□□□□□ -1.61
TRS20	YBR254C	VAC8	P39968	578 aa		5	□□□□□ -1.61
TRS20	YBR254C	URM1	P40554	99 aa	Predicted RBP	5	□□□□□ -1.61
TRS20	YBR254C	IOC3	P43596	787 aa		5	□□□□□ -1.61
TRS20	YBR254C	NCS6	P53088	359 aa		5	□□□□□ -1.61
TRS20	YBR254C	ALD6	P54115	500 aa	Known RBP	5	□□□□□ -1.61
TRS20	YBR254C	YDR306C	Q06640	478 aa		5	□□□□□ -1.61
TRS20	YBR254C	NPC2	Q12408	173 aa		5	□□□□□ -1.61
TRS20	YBR254C	PFK1	P16861	987 aa	Known RBP	4.99	□□□□□ -1.61
TRS20	YBR254C	TSL1	P38427	1098 aa	Known RBP	4.99	□□□□□ -1.61
TRS20	YBR254C	CHS7	P38843	316 aa		4.99	□□□□□ -1.61
TRS20	YBR254C	YER158C	P40095	573 aa		4.99	□□□□□ -1.61
TRS20	YBR254C	YPR196W	Q06595	470 aa		4.99	□□□□□ -1.61
TRS20	YBR254C	LAS17	Q12446	633 aa		4.99	□□□□□ -1.61
TRS20	YBR254C	AFR1	P33304	620 aa		4.98	□□□□□ -1.61
TRS20	YBR254C	HRR25	P29295	494 aa	Known RBP	4.97	□□□□□ -1.61
TRS20	YBR254C	PPH3	P32345	308 aa		4.97	□□□□□ -1.61
TRS20	YBR254C	RPC82	P32349	654 aa		4.97	□□□□□ -1.61
TRS20	YBR254C	ATG19	P35193	415 aa		4.97	□□□□□ -1.61
TRS20	YBR254C	CTF4	Q01454	927 aa		4.97	□□□□□ -1.61
TRS20	YBR254C	KAR4	P25583	335 aa		4.96	□□□□□ -1.62
TRS20	YBR254C	AAR2	P32357	355 aa	Predicted RBP	4.96	□□□□□ -1.62
TRS20	YBR254C	STE5	P32917	917 aa		4.96	□□□□□ -1.62
TRS20	YBR254C	MRP8	P35719	219 aa		4.96	□□□□□ -1.62
TRS20	YBR254C	YKR078W	P36158	585 aa	Known RBP	4.96	□□□□□ -1.62
TRS20	YBR254C	YKE2	P52553	114 aa		4.96	□□□□□ -1.62
TRS20	YBR254C	RAI1	P53063	387 aa	Known RBP	4.96	□□□□□ -1.62
TRS20	YBR254C	UPC2	Q12151	913 aa		4.96	□□□□□ -1.62
TRS20	YBR254C	CDC48	P25694	835 aa	Known RBP	4.95	□□□□□ -1.62
TRS20	YBR254C	PBY1	P38254	753 aa		4.95	□□□□□ -1.62
TRS20	YBR254C	SPF1	P39986	1215 aa	Known RBP	4.95	□□□□□ -1.62
TRS20	YBR254C	URN1	Q06525	465 aa	Known RBP	4.95	□□□□□ -1.62
TRS20	YBR254C	AIM39	Q08223	395 aa		4.95	□□□□□ -1.62
TRS20	YBR254C	NOT3	P06102	836 aa	Known RBP	4.94	□□□□□ -1.62
TRS20	YBR254C	YRO2	P38079	344 aa		4.94	□□□□□ -1.62
TRS20	YBR254C	ERT1	P38140	529 aa		4.94	□□□□□ -1.62
TRS20	YBR254C	IRR1	P40541	1150 aa		4.94	□□□□□ -1.62
TRS20	YBR254C	SNU71	P53207	620 aa	Known RBP	4.94	□□□□□ -1.62
TRS20	YBR254C	TDA5	Q06417	326 aa	Known RBP	4.94	□□□□□ -1.62
TRS20	YBR254C	ENB1	Q08299	606 aa		4.94	□□□□□ -1.62
TRS20	YBR254C	ADE8	P04161	214 aa		4.93	□□□□□ -1.62
TRS20	YBR254C	CAD1	P24813	409 aa	Known RBP	4.93	□□□□□ -1.62
TRS20	YBR254C	STE14	P32584	239 aa		4.93	□□□□□ -1.62
TRS20	YBR254C	YBR184W	P38299	523 aa		4.93	□□□□□ -1.62
TRS20	YBR254C	YBR238C	P38330	731 aa	Known RBP	4.93	□□□□□ -1.62
TRS20	YBR254C	BUL1	P48524	976 aa		4.93	□□□□□ -1.62
TRS20	YBR254C	SSL1	Q04673	461 aa	Predicted RBP	4.93	□□□□□ -1.62
TRS20	YBR254C	SED4	P25365	1065 aa		4.92	□□□□□ -1.62
TRS20	YBR254C	HBS1	P32769	611 aa	Known RBP	4.92	□□□□□ -1.62
TRS20	YBR254C	SIT1	P39980	628 aa		4.92	□□□□□ -1.62
TRS20	YBR254C	PFD1	P46988	109 aa		4.92	□□□□□ -1.62
TRS20	YBR254C	SLU7	Q02775	382 aa	Known RBP	4.92	□□□□□ -1.62
TRS20	YBR254C	GUP2	Q08929	609 aa		4.92	□□□□□ -1.62
TRS20	YBR254C	TAD3	Q9URQ3	322 aa		4.92	□□□□□ -1.62
TRS20	YBR254C	STE13	P33894	931 aa		4.91	□□□□□ -1.62
TRS20	YBR254C	BUL2	Q03758	920 aa	Known RBP	4.91	□□□□□ -1.62
TRS20	YBR254C	RAD53	P22216	821 aa		4.9	□□□□□ -1.63
TRS20	YBR254C	EFT1	P32324	842 aa	Known RBP	4.9	□□□□□ -1.63
TRS20	YBR254C	RPD3	P32561	433 aa		4.9	□□□□□ -1.63
TRS20	YBR254C	PAM1	P37304	830 aa	Known RBP	4.9	□□□□□ -1.63
TRS20	YBR254C	GIS1	Q03833	894 aa		4.9	□□□□□ -1.63
TRS20	YBR254C	YLR040C	Q07988	224 aa		4.9	□□□□□ -1.63
TRS20	YBR254C	TOK1	P40310	691 aa		4.89	□□□□□ -1.63
TRS20	YBR254C	FBP1	P09201	348 aa		4.88	□□□□□ -1.63
TRS20	YBR254C	PRP9	P19736	530 aa	Known RBP	4.88	□□□□□ -1.63
TRS20	YBR254C	GRX1	P25373	110 aa	Known RBP	4.88	□□□□□ -1.63
TRS20	YBR254C	TPO2	P53283	614 aa		4.88	□□□□□ -1.63
TRS20	YBR254C	FMP25	Q08023	583 aa		4.88	□□□□□ -1.63
TRS20	YBR254C	YBR284W	P38150	797 aa		4.87	□□□□□ -1.63
TRS20	YBR254C	MOH1	P38191	138 aa		4.87	□□□□□ -1.63
TRS20	YBR254C	SUL1	P38359	859 aa		4.87	□□□□□ -1.63
TRS20	YBR254C	ALR2	P43553	858 aa		4.87	□□□□□ -1.63
TRS20	YBR254C	CCM1	P48237	864 aa	Predicted RBP	4.87	□□□□□ -1.63
TRS20	YBR254C	LCD1	Q04377	747 aa		4.87	□□□□□ -1.63
TRS20	YBR254C	YOL073C	Q08232	322 aa		4.87	□□□□□ -1.63
TRS20	YBR254C	PPM2	Q08282	695 aa		4.87	□□□□□ -1.63
TRS20	YBR254C	SSF2	Q12153	453 aa	Predicted RBP	4.87	□□□□□ -1.63
TRS20	YBR254C	YPR071W	Q12346	211 aa		4.87	□□□□□ -1.63
TRS20	YBR254C	TRM13	Q12383	476 aa		4.87	□□□□□ -1.63
TRS20	YBR254C	TRP4	P07285	380 aa	Predicted RBP	4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms