RNA–Protein interactions for RNA: ENST00000642089.1

SAMMSON-226, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,582 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-226ENST00000642089 NPC1L1Q9UHC9 1359 aa6.58□□□□□ -1.36
SAMMSON-226ENST00000642089 ITGB4P16144 1822 aa6.58□□□□□ -1.36
SAMMSON-226ENST00000642089 ZBTB7AO95365 584 aa6.58□□□□□ -1.36
SAMMSON-226ENST00000642089 SLC15A2Q16348 729 aa6.58□□□□□ -1.36
SAMMSON-226ENST00000642089 ZNF827Q17R98 1081 aa6.58□□□□□ -1.36
SAMMSON-226ENST00000642089 C1orf141Q5JVX7 400 aa6.58□□□□□ -1.36
SAMMSON-226ENST00000642089 PIGBQ92521 554 aa6.58□□□□□ -1.36
SAMMSON-226ENST00000642089 TMOD3Q9NYL9 352 aa6.58□□□□□ -1.36
SAMMSON-226ENST00000642089 PALLDQ8WX93 1383 aa6.58□□□□□ -1.36
SAMMSON-226ENST00000642089 SRCAPQ6ZRS2 3230 aa6.57□□□□□ -1.36
SAMMSON-226ENST00000642089 CFAP53Q96M91 514 aa6.57□□□□□ -1.36
SAMMSON-226ENST00000642089 ASAP1Q9ULH1 1129 aa6.57□□□□□ -1.36
SAMMSON-226ENST00000642089 COL3A1P02461 1466 aaPredicted RBP6.57□□□□□ -1.36
SAMMSON-226ENST00000642089 U2AF1L5P0DN76 240 aaPredicted RBP6.57□□□□□ -1.36
SAMMSON-226ENST00000642089 ZEB1P37275 1124 aaPredicted RBP6.57□□□□□ -1.36
SAMMSON-226ENST00000642089 CABP4P57796 275 aa6.57□□□□□ -1.36
SAMMSON-226ENST00000642089 U2AF1Q01081 240 aaKnown RBP eCLIP6.57□□□□□ -1.36
SAMMSON-226ENST00000642089 AMOTQ4VCS5 1084 aa6.57□□□□□ -1.36
SAMMSON-226ENST00000642089 SMIM5Q71RC9 77 aa6.57□□□□□ -1.36
SAMMSON-226ENST00000642089 TFCP2L1Q9NZI6 479 aa6.57□□□□□ -1.36
SAMMSON-226ENST00000642089 KDM6AO15550 1401 aaPredicted RBP6.56□□□□□ -1.36
SAMMSON-226ENST00000642089 KDRP35968 1356 aa6.56□□□□□ -1.36
SAMMSON-226ENST00000642089 LY75O60449 1722 aa6.56□□□□□ -1.36
SAMMSON-226ENST00000642089 PRKAR2BP31323 418 aa6.56□□□□□ -1.36
SAMMSON-226ENST00000642089 NKX1-1Q15270 411 aaPredicted RBP6.56□□□□□ -1.36
SAMMSON-226ENST00000642089 MTHFSDQ2M296 383 aaKnown RBP6.56□□□□□ -1.36
SAMMSON-226ENST00000642089 SLC27A3Q5K4L6 730 aa6.56□□□□□ -1.36
SAMMSON-226ENST00000642089 NFATC2IPQ8NCF5 419 aa6.56□□□□□ -1.36
SAMMSON-226ENST00000642089 DCAF5Q96JK2 942 aa6.56□□□□□ -1.36
SAMMSON-226ENST00000642089 LGR6Q9HBX8 967 aa6.56□□□□□ -1.36
SAMMSON-226ENST00000642089 PPP1R1BQ9UD71 204 aaPredicted RBP6.56□□□□□ -1.36
SAMMSON-226ENST00000642089 PAPPAQ13219 1627 aa6.55□□□□□ -1.36
SAMMSON-226ENST00000642089 PTCD1O75127 700 aaKnown RBP6.55□□□□□ -1.36
SAMMSON-226ENST00000642089 PHF14O94880 888 aa6.55□□□□□ -1.36
SAMMSON-226ENST00000642089 PHACTR3Q96KR7 559 aa6.55□□□□□ -1.36
SAMMSON-226ENST00000642089 SPON1Q9HCB6 807 aa6.55□□□□□ -1.36
SAMMSON-226ENST00000642089 ATG3Q9NT62 314 aa6.55□□□□□ -1.36
SAMMSON-226ENST00000642089 LRP5O75197 1615 aa6.55□□□□□ -1.36
SAMMSON-226ENST00000642089 C5P01031 1676 aa6.54□□□□□ -1.36
SAMMSON-226ENST00000642089 CASZ1Q86V15 1759 aa6.54□□□□□ -1.36
SAMMSON-226ENST00000642089 KIF3CO14782 793 aa6.54□□□□□ -1.36
SAMMSON-226ENST00000642089 HSP90AB1P08238 724 aaKnown RBP6.54□□□□□ -1.36
SAMMSON-226ENST00000642089 ATP6V1AP38606 617 aa6.54□□□□□ -1.36
SAMMSON-226ENST00000642089 MSL1Q68DK7 614 aa6.54□□□□□ -1.36
SAMMSON-226ENST00000642089 HS6ST3Q8IZP7 471 aa6.54□□□□□ -1.36
SAMMSON-226ENST00000642089 SMARCC1Q92922 1105 aaPredicted RBP6.54□□□□□ -1.36
SAMMSON-226ENST00000642089 NUDCQ9Y266 331 aa6.54□□□□□ -1.36
SAMMSON-226ENST00000642089 TUBGCP6Q96RT7 1819 aa6.54□□□□□ -1.36
SAMMSON-226ENST00000642089 PNPLA7Q6ZV29 1317 aa6.54□□□□□ -1.36
SAMMSON-226ENST00000642089 LOC102724428A0A0B4J2F2 783 aa6.53□□□□□ -1.36
SAMMSON-226ENST00000642089 ERVV-2B6SEH9 535 aa6.53□□□□□ -1.36
SAMMSON-226ENST00000642089 SIK1P57059 783 aa6.53□□□□□ -1.36
SAMMSON-226ENST00000642089 SLC39A6Q13433 755 aa6.53□□□□□ -1.36
SAMMSON-226ENST00000642089 ITPK1Q13572 414 aa6.53□□□□□ -1.36
SAMMSON-226ENST00000642089 AKAP4Q5JQC9 854 aa6.53□□□□□ -1.36
SAMMSON-226ENST00000642089 AMIGO3Q86WK7 504 aa6.53□□□□□ -1.36
SAMMSON-226ENST00000642089 LINC00116Q8NCU8 138 aa6.53□□□□□ -1.36
SAMMSON-226ENST00000642089 AK7Q96M32 723 aa6.53□□□□□ -1.36
SAMMSON-226ENST00000642089 C2orf72A6NCS6 295 aa6.52□□□□□ -1.36
SAMMSON-226ENST00000642089 RNMTO43148 476 aaKnown RBP6.52□□□□□ -1.36
SAMMSON-226ENST00000642089 NFX1Q12986 1120 aaKnown RBP6.52□□□□□ -1.36
SAMMSON-226ENST00000642089 NEUROD2Q15784 382 aa6.52□□□□□ -1.36
SAMMSON-226ENST00000642089 COL23A1Q86Y22 540 aaPredicted RBP6.52□□□□□ -1.36
SAMMSON-226ENST00000642089 RSPH6AQ9H0K4 717 aa6.52□□□□□ -1.36
SAMMSON-226ENST00000642089 SCN11AQ9UI33 1791 aa6.52□□□□□ -1.37
SAMMSON-226ENST00000642089 C4BP0C0L5 1744 aa6.52□□□□□ -1.37
SAMMSON-226ENST00000642089 VIRMAQ69YN4 1812 aaKnown RBP6.52□□□□□ -1.37
SAMMSON-226ENST00000642089 TAF1LQ8IZX4 1826 aa6.52□□□□□ -1.37
SAMMSON-226ENST00000642089 GNAT3A8MTJ3 354 aa6.52□□□□□ -1.37
SAMMSON-226ENST00000642089 RIOK3O14730 519 aaKnown RBP6.52□□□□□ -1.37
SAMMSON-226ENST00000642089 GNPATO15228 680 aa6.52□□□□□ -1.37
SAMMSON-226ENST00000642089 DCTN1Q14203 1278 aa6.52□□□□□ -1.37
SAMMSON-226ENST00000642089 XP32Q5T750 250 aa6.52□□□□□ -1.37
SAMMSON-226ENST00000642089 SLC4A9Q96Q91 983 aa6.52□□□□□ -1.37
SAMMSON-226ENST00000642089 MTFR1LQ9H019 292 aa6.52□□□□□ -1.37
SAMMSON-226ENST00000642089 SLC52A2Q9HAB3 445 aa6.52□□□□□ -1.37
SAMMSON-226ENST00000642089 MAP3K5Q99683 1374 aa6.52□□□□□ -1.37
SAMMSON-226ENST00000642089 TEFQ10587 303 aa6.51□□□□□ -1.37
SAMMSON-226ENST00000642089 RALBP1Q15311 655 aa6.51□□□□□ -1.37
SAMMSON-226ENST00000642089 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.51□□□□□ -1.37
SAMMSON-226ENST00000642089 MCM10Q7L590 875 aa6.51□□□□□ -1.37
SAMMSON-226ENST00000642089 IL17REQ8NFR9 667 aa6.51□□□□□ -1.37
SAMMSON-226ENST00000642089 GAS2L2Q8NHY3 880 aa6.51□□□□□ -1.37
SAMMSON-226ENST00000642089 PLEKHG2Q9H7P9 1386 aa6.51□□□□□ -1.37
SAMMSON-226ENST00000642089 MYBBP1AQ9BQG0 1328 aaKnown RBP6.5□□□□□ -1.37
SAMMSON-226ENST00000642089 SENP3-EIF4A1A0A087X0R7 540 aa6.5□□□□□ -1.37
SAMMSON-226ENST00000642089 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.5□□□□□ -1.37
SAMMSON-226ENST00000642089 FCHSD2O94868 740 aa6.5□□□□□ -1.37
SAMMSON-226ENST00000642089 NEFMP07197 916 aa6.5□□□□□ -1.37
SAMMSON-226ENST00000642089 CCDC146Q8IYE0 955 aa6.5□□□□□ -1.37
SAMMSON-226ENST00000642089 FHDC1Q9C0D6 1143 aaPredicted RBP6.5□□□□□ -1.37
SAMMSON-226ENST00000642089 SOWAHBA6NEL2 793 aa6.49□□□□□ -1.37
SAMMSON-226ENST00000642089 POLD1P28340 1107 aa6.49□□□□□ -1.37
SAMMSON-226ENST00000642089 CRKLP46109 303 aaKnown RBP6.49□□□□□ -1.37
SAMMSON-226ENST00000642089 DNAJC10Q8IXB1 793 aa6.49□□□□□ -1.37
SAMMSON-226ENST00000642089 TTC5Q8N0Z6 440 aa6.49□□□□□ -1.37
SAMMSON-226ENST00000642089 RTF1Q92541 710 aaKnown RBP6.49□□□□□ -1.37
SAMMSON-226ENST00000642089 THUMPD2Q9BTF0 503 aaKnown RBP6.49□□□□□ -1.37
SAMMSON-226ENST00000642089 ZMYND15Q9H091 742 aa6.49□□□□□ -1.37
SAMMSON-226ENST00000642089 MIS18AQ9NYP9 233 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms