RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 PROSER3Q2NL68 480 aa16.42■□□□□ 0.22
PHGDH-218ENST00000641491 HSP90AB3PQ58FF7 597 aa16.42■□□□□ 0.22
PHGDH-218ENST00000641491 INTS5Q6P9B9 1019 aaKnown RBP16.42■□□□□ 0.22
PHGDH-218ENST00000641491 SLC4A10Q6U841 1118 aa16.42■□□□□ 0.22
PHGDH-218ENST00000641491 SUPT16HQ9Y5B9 1047 aaKnown RBP16.42■□□□□ 0.22
PHGDH-218ENST00000641491 CHD4Q14839 1912 aa16.42■□□□□ 0.22
PHGDH-218ENST00000641491 NPHP1O15259 732 aa16.41■□□□□ 0.22
PHGDH-218ENST00000641491 BRPF1P55201 1214 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-218ENST00000641491 ATF7IPQ6VMQ6 1270 aa16.41■□□□□ 0.22
PHGDH-218ENST00000641491 ANKRD13DQ6ZTN6 518 aa16.41■□□□□ 0.22
PHGDH-218ENST00000641491 ARHGAP45Q92619 1136 aa16.41■□□□□ 0.22
PHGDH-218ENST00000641491 ZBTB3Q9H5J0 574 aa16.41■□□□□ 0.22
PHGDH-218ENST00000641491 PHAXQ9H814 394 aaKnown RBP16.41■□□□□ 0.22
PHGDH-218ENST00000641491 C4BP0C0L5 1744 aa16.41■□□□□ 0.22
PHGDH-218ENST00000641491 CICQ96RK0 1608 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-218ENST00000641491 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.4■□□□□ 0.22
PHGDH-218ENST00000641491 NBPF26B4DH59 902 aa16.4■□□□□ 0.22
PHGDH-218ENST00000641491 NBPF10Q6P3W6 841 aaKnown RBP16.4■□□□□ 0.22
PHGDH-218ENST00000641491 DZIP1LQ8IYY4 767 aaKnown RBP16.4■□□□□ 0.22
PHGDH-218ENST00000641491 NBPF15Q8N660 670 aa16.4■□□□□ 0.22
PHGDH-218ENST00000641491 PLBD2Q8NHP8 589 aa16.4■□□□□ 0.22
PHGDH-218ENST00000641491 CHMP4BQ9H444 224 aaKnown RBP16.4■□□□□ 0.22
PHGDH-218ENST00000641491 EIF5P55010 431 aaKnown RBP16.39■□□□□ 0.21
PHGDH-218ENST00000641491 PDIA6Q15084 440 aa16.39■□□□□ 0.21
PHGDH-218ENST00000641491 SLC15A2Q16348 729 aa16.39■□□□□ 0.21
PHGDH-218ENST00000641491 KSR2Q6VAB6 950 aa16.39■□□□□ 0.21
PHGDH-218ENST00000641491 DNAAF4Q8WXU2 420 aa16.39■□□□□ 0.21
PHGDH-218ENST00000641491 SGIP1Q9BQI5 828 aa16.39■□□□□ 0.21
PHGDH-218ENST00000641491 MTFR1LQ9H019 292 aa16.39■□□□□ 0.21
PHGDH-218ENST00000641491 TBC1D2BQ9UPU7 963 aa16.39■□□□□ 0.21
PHGDH-218ENST00000641491 MAP3K2Q9Y2U5 619 aa16.39■□□□□ 0.21
PHGDH-218ENST00000641491 MAP3K15Q6ZN16 1313 aa16.39■□□□□ 0.21
PHGDH-218ENST00000641491 PI4KAP2A4QPH2 592 aa16.38■□□□□ 0.21
PHGDH-218ENST00000641491 CCT4P50991 539 aaKnown RBP16.38■□□□□ 0.21
PHGDH-218ENST00000641491 G2E3Q7L622 706 aa16.38■□□□□ 0.21
PHGDH-218ENST00000641491 ITPRIPQ8IWB1 547 aa16.38■□□□□ 0.21
PHGDH-218ENST00000641491 PI4KAP1Q8N8J0 262 aa16.38■□□□□ 0.21
PHGDH-218ENST00000641491 CLUAP1Q96AJ1 413 aa16.38■□□□□ 0.21
PHGDH-218ENST00000641491 ERVV-1B6SEH8 477 aa16.37■□□□□ 0.21
PHGDH-218ENST00000641491 PLIN1O60240 522 aa16.37■□□□□ 0.21
PHGDH-218ENST00000641491 ZNF827Q17R98 1081 aa16.37■□□□□ 0.21
PHGDH-218ENST00000641491 TTLL7Q6ZT98 887 aa16.37■□□□□ 0.21
PHGDH-218ENST00000641491 AKT1S1Q96B36 256 aa16.37■□□□□ 0.21
PHGDH-218ENST00000641491 COL5A3P25940 1745 aaPredicted RBP16.36■□□□□ 0.21
PHGDH-218ENST00000641491 TRIM27P14373 513 aa16.36■□□□□ 0.21
PHGDH-218ENST00000641491 ARHGEF1Q92888 912 aaKnown RBP16.36■□□□□ 0.21
PHGDH-218ENST00000641491 MYD88Q99836 296 aa16.36■□□□□ 0.21
PHGDH-218ENST00000641491 SRCIN1Q9C0H9 1055 aa16.36■□□□□ 0.21
PHGDH-218ENST00000641491 NARFQ9UHQ1 456 aa16.36■□□□□ 0.21
PHGDH-218ENST00000641491 PDE3AQ14432 1141 aa16.35■□□□□ 0.21
PHGDH-218ENST00000641491 HDAC5Q9UQL6 1122 aa16.35■□□□□ 0.21
PHGDH-218ENST00000641491 F6X3S4 739 aa16.34■□□□□ 0.21
PHGDH-218ENST00000641491 GTF2E1P29083 439 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-218ENST00000641491 USPL1Q5W0Q7 1092 aa16.34■□□□□ 0.21
PHGDH-218ENST00000641491 CLEC4GQ6UXB4 293 aa16.34■□□□□ 0.21
PHGDH-218ENST00000641491 METTL22Q9BUU2 404 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-218ENST00000641491 RGL2O15211 777 aa16.33■□□□□ 0.2
PHGDH-218ENST00000641491 GIGYF2Q6Y7W6 1299 aaKnown RBP16.33■□□□□ 0.2
PHGDH-218ENST00000641491 SETDB2Q96T68 719 aa16.33■□□□□ 0.2
PHGDH-218ENST00000641491 C9orf78Q9NZ63 289 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-218ENST00000641491 USP42Q9H9J4 1324 aaKnown RBP16.33■□□□□ 0.2
PHGDH-218ENST00000641491 PXDNLA1KZ92 1463 aa16.33■□□□□ 0.2
PHGDH-218ENST00000641491 CAMTA2O94983 1202 aa16.32■□□□□ 0.2
PHGDH-218ENST00000641491 HSP90B1P14625 803 aaKnown RBP16.32■□□□□ 0.2
PHGDH-218ENST00000641491 PARP10Q53GL7 1025 aa16.32■□□□□ 0.2
PHGDH-218ENST00000641491 BICDL1Q6ZP65 573 aa16.32■□□□□ 0.2
PHGDH-218ENST00000641491 PPP1R42Q7Z4L9 355 aa16.32■□□□□ 0.2
PHGDH-218ENST00000641491 TAF1LQ8IZX4 1826 aa16.32■□□□□ 0.2
PHGDH-218ENST00000641491 LINS1Q8NG48 757 aa16.32■□□□□ 0.2
PHGDH-218ENST00000641491 DDX19BQ9UMR2 479 aa16.32■□□□□ 0.2
PHGDH-218ENST00000641491 NIP7Q9Y221 180 aaKnown RBP eCLIP16.32■□□□□ 0.2
PHGDH-218ENST00000641491 ADCY9O60503 1353 aa16.31■□□□□ 0.2
PHGDH-218ENST00000641491 ABCC4O15439 1325 aa16.31■□□□□ 0.2
PHGDH-218ENST00000641491 PNPLA7Q6ZV29 1317 aa16.31■□□□□ 0.2
PHGDH-218ENST00000641491 ALDH1L1O75891 902 aa16.31■□□□□ 0.2
PHGDH-218ENST00000641491 GPTP24298 496 aa16.31■□□□□ 0.2
PHGDH-218ENST00000641491 TCIRG1Q13488 830 aa16.31■□□□□ 0.2
PHGDH-218ENST00000641491 GPR162Q16538 588 aa16.31■□□□□ 0.2
PHGDH-218ENST00000641491 LRP10Q7Z4F1 713 aa16.31■□□□□ 0.2
PHGDH-218ENST00000641491 NLGN1Q8N2Q7 840 aa16.31■□□□□ 0.2
PHGDH-218ENST00000641491 PANK1Q8TE04 598 aa16.31■□□□□ 0.2
PHGDH-218ENST00000641491 CWC25Q9NXE8 425 aaPredicted RBP16.31■□□□□ 0.2
PHGDH-218ENST00000641491 SRP68Q9UHB9 627 aaKnown RBP16.31■□□□□ 0.2
PHGDH-218ENST00000641491 CACNA1FO60840 1977 aa16.3■□□□□ 0.2
PHGDH-218ENST00000641491 ATP5J2-PTCD1G3V325 749 aa16.3■□□□□ 0.2
PHGDH-218ENST00000641491 TMEM57Q8N5G2 664 aa16.3■□□□□ 0.2
PHGDH-218ENST00000641491 NYXQ9GZU5 481 aa16.3■□□□□ 0.2
PHGDH-218ENST00000641491 ATP10DQ9P241 1426 aa16.29■□□□□ 0.2
PHGDH-218ENST00000641491 GNAI3P08754 354 aa16.29■□□□□ 0.2
PHGDH-218ENST00000641491 POLD1P28340 1107 aa16.29■□□□□ 0.2
PHGDH-218ENST00000641491 MVPQ14764 893 aaKnown RBP16.29■□□□□ 0.2
PHGDH-218ENST00000641491 SMIM5Q71RC9 77 aa16.29■□□□□ 0.2
PHGDH-218ENST00000641491 NBPF5PQ86XG9 351 aaPredicted RBP16.29■□□□□ 0.2
PHGDH-218ENST00000641491 COL23A1Q86Y22 540 aaPredicted RBP16.29■□□□□ 0.2
PHGDH-218ENST00000641491 CCDC191Q8NCU4 936 aa16.29■□□□□ 0.2
PHGDH-218ENST00000641491 SLC16A10Q8TF71 515 aa16.29■□□□□ 0.2
PHGDH-218ENST00000641491 COG6Q9Y2V7 657 aa16.29■□□□□ 0.2
PHGDH-218ENST00000641491 PARP3Q9Y6F1 533 aa16.29■□□□□ 0.2
PHGDH-218ENST00000641491 FAM177BA6PVY3 158 aa16.28■□□□□ 0.2
PHGDH-218ENST00000641491 HLFQ16534 295 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms