RNA–Protein interactions for RNA: ENST00000641411.1

CASC19-227, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,285 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-227ENST00000641411 KIF3BO15066 747 aa10.49□□□□□ -0.73
CASC19-227ENST00000641411 RASSF7Q02833 373 aa10.49□□□□□ -0.73
CASC19-227ENST00000641411 FOXD4L5Q5VV16 416 aaPredicted RBP10.49□□□□□ -0.73
CASC19-227ENST00000641411 GPBP1L1Q9HC44 474 aaPredicted RBP10.49□□□□□ -0.73
CASC19-227ENST00000641411 TMPRSS4Q9NRS4 437 aa10.49□□□□□ -0.73
CASC19-227ENST00000641411 IQGAP1P46940 1657 aa10.49□□□□□ -0.73
CASC19-227ENST00000641411 ARHGEF15O94989 841 aa10.48□□□□□ -0.73
CASC19-227ENST00000641411 KCTD17Q8N5Z5 321 aa10.48□□□□□ -0.73
CASC19-227ENST00000641411 KTN1Q86UP2 1357 aaKnown RBP10.48□□□□□ -0.73
CASC19-227ENST00000641411 ARHGAP31Q2M1Z3 1444 aa10.48□□□□□ -0.73
CASC19-227ENST00000641411 ABCC3O15438 1527 aa10.48□□□□□ -0.73
CASC19-227ENST00000641411 ADGRB3O60242 1522 aa10.48□□□□□ -0.73
CASC19-227ENST00000641411 AP1G2O75843 785 aa10.47□□□□□ -0.73
CASC19-227ENST00000641411 USP17L8P0C7I0 530 aa10.47□□□□□ -0.73
CASC19-227ENST00000641411 ADD1P35611 737 aaKnown RBP10.47□□□□□ -0.73
CASC19-227ENST00000641411 SV2AQ7L0J3 742 aa10.47□□□□□ -0.73
CASC19-227ENST00000641411 VWA5B2Q8N398 1253 aa10.47□□□□□ -0.73
CASC19-227ENST00000641411 TMEM151AQ8N4L1 468 aa10.47□□□□□ -0.73
CASC19-227ENST00000641411 COL17A1Q9UMD9 1497 aaPredicted RBP10.47□□□□□ -0.73
CASC19-227ENST00000641411 CAMSAP1Q5T5Y3 1602 aa10.47□□□□□ -0.73
CASC19-227ENST00000641411 ERVH48-1M5A8F1 160 aa10.46□□□□□ -0.73
CASC19-227ENST00000641411 PNMA1Q8ND90 353 aa10.46□□□□□ -0.73
CASC19-227ENST00000641411 ZNF395Q9H8N7 513 aaPredicted RBP10.46□□□□□ -0.73
CASC19-227ENST00000641411 POLMQ9NP87 494 aaPredicted RBP10.46□□□□□ -0.73
CASC19-227ENST00000641411 NRXN1Q9ULB1 1477 aa10.46□□□□□ -0.74
CASC19-227ENST00000641411 PIK3C2BO00750 1634 aa10.45□□□□□ -0.74
CASC19-227ENST00000641411 GDF11O95390 407 aa10.45□□□□□ -0.74
CASC19-227ENST00000641411 PTGIRP43119 386 aa10.45□□□□□ -0.74
CASC19-227ENST00000641411 ZNF326Q5BKZ1 582 aaKnown RBP10.45□□□□□ -0.74
CASC19-227ENST00000641411 SEPT12Q8IYM1 358 aa10.45□□□□□ -0.74
CASC19-227ENST00000641411 WHAMMQ8TF30 809 aa10.45□□□□□ -0.74
CASC19-227ENST00000641411 PRKRIP1Q9H875 184 aaPredicted RBP10.45□□□□□ -0.74
CASC19-227ENST00000641411 GTF3C3Q9Y5Q9 886 aa10.45□□□□□ -0.74
CASC19-227ENST00000641411 AGLP35573 1532 aa10.44□□□□□ -0.74
CASC19-227ENST00000641411 NOS1P29475 1434 aa10.44□□□□□ -0.74
CASC19-227ENST00000641411 SUZ12Q15022 739 aaKnown RBP10.44□□□□□ -0.74
CASC19-227ENST00000641411 SVOPQ8N4V2 548 aa10.44□□□□□ -0.74
CASC19-227ENST00000641411 NPATQ14207 1427 aa10.43□□□□□ -0.74
CASC19-227ENST00000641411 CDC14CA4D256 554 aa10.43□□□□□ -0.74
CASC19-227ENST00000641411 SLC24A1O60721 1099 aa10.43□□□□□ -0.74
CASC19-227ENST00000641411 MROH2AA6NES4 1674 aa10.43□□□□□ -0.74
CASC19-227ENST00000641411 SETBP1Q9Y6X0 1596 aa10.43□□□□□ -0.74
CASC19-227ENST00000641411 SCAF11Q99590 1463 aaKnown RBP10.42□□□□□ -0.74
CASC19-227ENST00000641411 PPLO60437 1756 aa10.42□□□□□ -0.74
CASC19-227ENST00000641411 ST20-MTHFSA0A0A6YYL1 179 aa10.42□□□□□ -0.74
CASC19-227ENST00000641411 RGL3Q3MIN7 710 aa10.42□□□□□ -0.74
CASC19-227ENST00000641411 CYB5RLQ6IPT4 315 aa10.42□□□□□ -0.74
CASC19-227ENST00000641411 DZIP3Q86Y13 1208 aaKnown RBP10.42□□□□□ -0.74
CASC19-227ENST00000641411 TRIM34Q9BYJ4 488 aa10.42□□□□□ -0.74
CASC19-227ENST00000641411 MYO3AQ8NEV4 1616 aa10.42□□□□□ -0.74
CASC19-227ENST00000641411 RPGRIP1LQ68CZ1 1315 aa10.41□□□□□ -0.74
CASC19-227ENST00000641411 WASHC2CQ9Y4E1 1318 aa10.41□□□□□ -0.74
CASC19-227ENST00000641411 RFC5P40937 340 aa10.41□□□□□ -0.74
CASC19-227ENST00000641411 CUEDC1Q9NWM3 386 aaPredicted RBP10.41□□□□□ -0.74
CASC19-227ENST00000641411 EIF3AQ14152 1382 aaKnown RBP10.4□□□□□ -0.74
CASC19-227ENST00000641411 SRSF11Q05519 484 aaKnown RBP10.4□□□□□ -0.74
CASC19-227ENST00000641411 GAS6Q14393 721 aa10.4□□□□□ -0.74
CASC19-227ENST00000641411 TESK2Q96S53 571 aa10.4□□□□□ -0.74
CASC19-227ENST00000641411 KIF13AQ9H1H9 1805 aa10.4□□□□□ -0.75
CASC19-227ENST00000641411 ADAMTS2O95450 1211 aa10.39□□□□□ -0.75
CASC19-227ENST00000641411 RNF144AP50876 292 aaPredicted RBP10.39□□□□□ -0.75
CASC19-227ENST00000641411 NBPF1Q3BBV0 1214 aa10.39□□□□□ -0.75
CASC19-227ENST00000641411 LYSMD3Q7Z3D4 306 aa10.39□□□□□ -0.75
CASC19-227ENST00000641411 GOPCQ9HD26 462 aa10.39□□□□□ -0.75
CASC19-227ENST00000641411 SYNMO15061 1565 aa10.39□□□□□ -0.75
CASC19-227ENST00000641411 SIGLEC1Q9BZZ2 1709 aa10.38□□□□□ -0.75
CASC19-227ENST00000641411 RAPGEF3O95398 923 aa10.38□□□□□ -0.75
CASC19-227ENST00000641411 RAB15P59190 212 aa10.38□□□□□ -0.75
CASC19-227ENST00000641411 DNMT3AQ9Y6K1 912 aaPredicted RBP10.38□□□□□ -0.75
CASC19-227ENST00000641411 YEATS2Q9ULM3 1422 aa10.38□□□□□ -0.75
CASC19-227ENST00000641411 UGGT1Q9NYU2 1555 aa10.38□□□□□ -0.75
CASC19-227ENST00000641411 SBNO2Q9Y2G9 1366 aa10.38□□□□□ -0.75
CASC19-227ENST00000641411 ARHGEF40Q8TER5 1519 aa10.38□□□□□ -0.75
CASC19-227ENST00000641411 ZFYVE9O95405 1425 aa10.37□□□□□ -0.75
CASC19-227ENST00000641411 TMF1P82094 1093 aa10.37□□□□□ -0.75
CASC19-227ENST00000641411 FAM69CQ0P6D2 419 aa10.37□□□□□ -0.75
CASC19-227ENST00000641411 RALBP1Q15311 655 aa10.37□□□□□ -0.75
CASC19-227ENST00000641411 CDCA8Q53HL2 280 aa10.37□□□□□ -0.75
CASC19-227ENST00000641411 PREX1Q8TCU6 1659 aa10.37□□□□□ -0.75
CASC19-227ENST00000641411 PIK3C2GO75747 1445 aa10.36□□□□□ -0.75
CASC19-227ENST00000641411 MARSP56192 900 aaKnown RBP10.36□□□□□ -0.75
CASC19-227ENST00000641411 CYLDQ9NQC7 956 aa10.36□□□□□ -0.75
CASC19-227ENST00000641411 GPC1P35052 558 aa10.35□□□□□ -0.75
CASC19-227ENST00000641411 KANK3Q6NY19 840 aa10.35□□□□□ -0.75
CASC19-227ENST00000641411 LYPD4Q6UWN0 246 aa10.35□□□□□ -0.75
CASC19-227ENST00000641411 GMCL1Q96IK5 515 aa10.35□□□□□ -0.75
CASC19-227ENST00000641411 BRD4O60885 1362 aaPredicted RBP10.35□□□□□ -0.75
CASC19-227ENST00000641411 INSRP06213 1382 aa10.35□□□□□ -0.75
CASC19-227ENST00000641411 TSPOAP1O95153 1857 aa10.34□□□□□ -0.75
CASC19-227ENST00000641411 NEXMIFQ5QGS0 1516 aa10.34□□□□□ -0.75
CASC19-227ENST00000641411 MAP3K10Q02779 954 aa10.34□□□□□ -0.75
CASC19-227ENST00000641411 CCDC125Q86Z20 511 aa10.34□□□□□ -0.75
CASC19-227ENST00000641411 ZNF837Q96EG3 531 aaPredicted RBP10.34□□□□□ -0.75
CASC19-227ENST00000641411 GJD4Q96KN9 370 aaPredicted RBP10.34□□□□□ -0.75
CASC19-227ENST00000641411 SLC52A1Q9NWF4 448 aa10.34□□□□□ -0.75
CASC19-227ENST00000641411 PARD3Q8TEW0 1356 aa10.34□□□□□ -0.75
CASC19-227ENST00000641411 DISP3Q9P2K9 1392 aa10.34□□□□□ -0.75
CASC19-227ENST00000641411 KDM5AP29375 1690 aaKnown RBP10.34□□□□□ -0.75
CASC19-227ENST00000641411 ZBBXA8MT70 800 aa10.33□□□□□ -0.76
CASC19-227ENST00000641411 IRS1P35568 1242 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms