RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 NEUROD4Q9HD90 331 aa8.75□□□□□ -1.01
AP3S1-209ENST00000640413 ZNF232Q9UNY5 417 aa8.75□□□□□ -1.01
AP3S1-209ENST00000640413 M0R082 166 aa8.74□□□□□ -1.01
AP3S1-209ENST00000640413 SIN3BO75182 1162 aa8.74□□□□□ -1.01
AP3S1-209ENST00000640413 NCOA4Q13772 614 aa8.74□□□□□ -1.01
AP3S1-209ENST00000640413 PRRT3Q5FWE3 981 aa8.74□□□□□ -1.01
AP3S1-209ENST00000640413 ZNF417Q8TAU3 575 aa8.74□□□□□ -1.01
AP3S1-209ENST00000640413 C7orf43Q8WVR3 580 aa8.74□□□□□ -1.01
AP3S1-209ENST00000640413 PSMG3-AS1Q96PY0 264 aa8.74□□□□□ -1.01
AP3S1-209ENST00000640413 ZNF587Q96SQ5 575 aaPredicted RBP8.74□□□□□ -1.01
AP3S1-209ENST00000640413 EPHA4P54764 986 aa8.73□□□□□ -1.01
AP3S1-209ENST00000640413 COL9A3Q14050 684 aaPredicted RBP8.73□□□□□ -1.01
AP3S1-209ENST00000640413 MCM6Q14566 821 aa8.73□□□□□ -1.01
AP3S1-209ENST00000640413 DEPDC4Q8N2C3 294 aa8.73□□□□□ -1.01
AP3S1-209ENST00000640413 TPSG1Q9NRR2 321 aa8.73□□□□□ -1.01
AP3S1-209ENST00000640413 STARD13Q9Y3M8 1113 aa8.73□□□□□ -1.01
AP3S1-209ENST00000640413 SPDYE3A6NKU9 549 aa8.72□□□□□ -1.01
AP3S1-209ENST00000640413 ADARB2-AS1A8MUL3 147 aa8.72□□□□□ -1.01
AP3S1-209ENST00000640413 SLC24A1O60721 1099 aa8.72□□□□□ -1.01
AP3S1-209ENST00000640413 APBA3O96018 575 aa8.72□□□□□ -1.01
AP3S1-209ENST00000640413 ALBP02768 609 aa8.72□□□□□ -1.01
AP3S1-209ENST00000640413 NKAPLQ5M9Q1 402 aa8.72□□□□□ -1.01
AP3S1-209ENST00000640413 RAB44Q7Z6P3 723 aaPredicted RBP8.72□□□□□ -1.01
AP3S1-209ENST00000640413 ALG2Q9H553 416 aa8.72□□□□□ -1.01
AP3S1-209ENST00000640413 FOXD4L6Q3SYB3 417 aaPredicted RBP8.71□□□□□ -1.02
AP3S1-209ENST00000640413 TPRNQ4KMQ1 711 aa8.71□□□□□ -1.02
AP3S1-209ENST00000640413 FOXD4L3Q6VB84 417 aaPredicted RBP8.71□□□□□ -1.02
AP3S1-209ENST00000640413 MICALL1Q8N3F8 863 aa8.71□□□□□ -1.02
AP3S1-209ENST00000640413 RHPN1Q8TCX5 695 aa8.71□□□□□ -1.02
AP3S1-209ENST00000640413 COG6Q9Y2V7 657 aa8.71□□□□□ -1.02
AP3S1-209ENST00000640413 SERTM1A2A2V5 107 aa8.7□□□□□ -1.02
AP3S1-209ENST00000640413 LZTS3O60299 673 aaPredicted RBP8.7□□□□□ -1.02
AP3S1-209ENST00000640413 SPEM2Q0P670 501 aa8.7□□□□□ -1.02
AP3S1-209ENST00000640413 TNFRSF25Q93038 417 aa8.7□□□□□ -1.02
AP3S1-209ENST00000640413 USP17L5A8MUK1 530 aa8.69□□□□□ -1.02
AP3S1-209ENST00000640413 TRIM28Q13263 835 aaKnown RBP8.69□□□□□ -1.02
AP3S1-209ENST00000640413 GRIK4Q16099 956 aa8.69□□□□□ -1.02
AP3S1-209ENST00000640413 HSH2DQ96JZ2 352 aa8.69□□□□□ -1.02
AP3S1-209ENST00000640413 HCN4Q9Y3Q4 1203 aa8.69□□□□□ -1.02
AP3S1-209ENST00000640413 SCO2A0A1W2PP80 73 aa8.68□□□□□ -1.02
AP3S1-209ENST00000640413 ADH7P40394 386 aa8.68□□□□□ -1.02
AP3S1-209ENST00000640413 NFATC2IPQ8NCF5 419 aa8.68□□□□□ -1.02
AP3S1-209ENST00000640413 PRDM6Q9NQX0 595 aa8.68□□□□□ -1.02
AP3S1-209ENST00000640413 KIAA1024Q9UPX6 916 aa8.68□□□□□ -1.02
AP3S1-209ENST00000640413 ZBTB7BO15156 539 aaPredicted RBP8.67□□□□□ -1.02
AP3S1-209ENST00000640413 DYRK3O43781 588 aa8.67□□□□□ -1.02
AP3S1-209ENST00000640413 NID1P14543 1247 aa8.67□□□□□ -1.02
AP3S1-209ENST00000640413 TPCN2Q8NHX9 752 aa8.67□□□□□ -1.02
AP3S1-209ENST00000640413 CEP63Q96MT8 703 aa8.67□□□□□ -1.02
AP3S1-209ENST00000640413 TSPAN10Q9H1Z9 355 aaPredicted RBP8.67□□□□□ -1.02
AP3S1-209ENST00000640413 BRD7Q9NPI1 651 aa8.67□□□□□ -1.02
AP3S1-209ENST00000640413 GPC6Q9Y625 555 aaPredicted RBP8.67□□□□□ -1.02
AP3S1-209ENST00000640413 SFI1A8K8P3 1242 aa8.66□□□□□ -1.02
AP3S1-209ENST00000640413 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.65□□□□□ -1.02
AP3S1-209ENST00000640413 C20orf204Q6ZNR8 217 aa8.65□□□□□ -1.02
AP3S1-209ENST00000640413 ZNF280CQ8ND82 737 aa8.65□□□□□ -1.02
AP3S1-209ENST00000640413 POM121Q96HA1 1249 aa8.65□□□□□ -1.02
AP3S1-209ENST00000640413 KRTAP9-2Q9BYQ4 174 aa8.65□□□□□ -1.02
AP3S1-209ENST00000640413 PHACTR1Q9C0D0 580 aa8.65□□□□□ -1.02
AP3S1-209ENST00000640413 PSMA6P60900 246 aaKnown RBP8.64□□□□□ -1.03
AP3S1-209ENST00000640413 CLDN10P78369 228 aa8.64□□□□□ -1.03
AP3S1-209ENST00000640413 NEUROD1Q13562 356 aa8.64□□□□□ -1.03
AP3S1-209ENST00000640413 TRAPPC3LQ5T215 181 aa8.64□□□□□ -1.03
AP3S1-209ENST00000640413 CCDC102BQ68D86 513 aa8.64□□□□□ -1.03
AP3S1-209ENST00000640413 NACC1Q96RE7 527 aa8.64□□□□□ -1.03
AP3S1-209ENST00000640413 KCNH4Q9UQ05 1017 aa8.64□□□□□ -1.03
AP3S1-209ENST00000640413 TYRO3Q06418 890 aa8.63□□□□□ -1.03
AP3S1-209ENST00000640413 TBC1D8BQ0IIM8 1120 aa8.63□□□□□ -1.03
AP3S1-209ENST00000640413 PRSS36Q5K4E3 855 aa8.63□□□□□ -1.03
AP3S1-209ENST00000640413 C1orf53Q5VUE5 145 aa8.63□□□□□ -1.03
AP3S1-209ENST00000640413 TRIM50Q86XT4 487 aa8.63□□□□□ -1.03
AP3S1-209ENST00000640413 BHMTQ93088 406 aa8.63□□□□□ -1.03
AP3S1-209ENST00000640413 SUSD3Q96L08 255 aa8.62□□□□□ -1.03
AP3S1-209ENST00000640413 IGFLR1Q9H665 355 aa8.62□□□□□ -1.03
AP3S1-209ENST00000640413 ANKIB1Q9P2G1 1089 aa8.62□□□□□ -1.03
AP3S1-209ENST00000640413 KRTAP9-6A0A140TA67 174 aa8.61□□□□□ -1.03
AP3S1-209ENST00000640413 POM121CA8CG34 1229 aa8.61□□□□□ -1.03
AP3S1-209ENST00000640413 LILRB5O75023 590 aa8.61□□□□□ -1.03
AP3S1-209ENST00000640413 KCNQ4P56696 695 aa8.61□□□□□ -1.03
AP3S1-209ENST00000640413 ADAMTS19Q8TE59 1207 aa8.61□□□□□ -1.03
AP3S1-209ENST00000640413 CHMP3Q9Y3E7 222 aa8.61□□□□□ -1.03
AP3S1-209ENST00000640413 USP17L3A6NCW0 530 aa8.6□□□□□ -1.03
AP3S1-209ENST00000640413 USP17L4A6NCW7 530 aa8.6□□□□□ -1.03
AP3S1-209ENST00000640413 SELPP16109 830 aa8.6□□□□□ -1.03
AP3S1-209ENST00000640413 ATP1A2P50993 1020 aa8.6□□□□□ -1.03
AP3S1-209ENST00000640413 HIRAP54198 1017 aaPredicted RBP8.6□□□□□ -1.03
AP3S1-209ENST00000640413 USP17L2Q6R6M4 530 aa8.6□□□□□ -1.03
AP3S1-209ENST00000640413 USP17L1Q7RTZ2 530 aa8.6□□□□□ -1.03
AP3S1-209ENST00000640413 WWC1Q8IX03 1113 aa8.6□□□□□ -1.03
AP3S1-209ENST00000640413 UBE2OQ9C0C9 1292 aaKnown RBP8.6□□□□□ -1.03
AP3S1-209ENST00000640413 A0A0A0MRY4 1105 aa8.59□□□□□ -1.03
AP3S1-209ENST00000640413 C9orf172C9J069 976 aa8.59□□□□□ -1.03
AP3S1-209ENST00000640413 ADGRE1Q14246 886 aa8.59□□□□□ -1.03
AP3S1-209ENST00000640413 ARTNQ5T4W7 220 aa8.59□□□□□ -1.03
AP3S1-209ENST00000640413 POTEAQ6S8J7 498 aa8.59□□□□□ -1.03
AP3S1-209ENST00000640413 PLEKHM2Q8IWE5 1019 aa8.59□□□□□ -1.03
AP3S1-209ENST00000640413 OGFOD1Q8N543 542 aa8.59□□□□□ -1.03
AP3S1-209ENST00000640413 TSEN2Q8NCE0 465 aaKnown RBP8.59□□□□□ -1.03
AP3S1-209ENST00000640413 NUDT8Q8WV74 236 aa8.59□□□□□ -1.03
AP3S1-209ENST00000640413 ZFP64Q9NPA5 681 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms